Marinobacter sp. NP-4(2019): EHN06_18615
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Entry
EHN06_18615 CDS
T09527
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
manp
Marinobacter sp. NP-4(2019)
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manp03021
]
EHN06_18615 (rapA)
Transcription machinery [BR:
manp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
EHN06_18615 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Tudor_RapA
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AZT85399
UniProt:
A0A3T0CY18
LinkDB
All DBs
Position
complement(4077112..4079973)
Genome browser
AA seq
953 aa
AA seq
DB search
MDASDFVIGQRWVSHSDTGLGLGIVTDISGRRVTLGFPAADEERTYAIDNAPLSRIIYQI
GEEIETFDGDRYTVQAVEDLGGVLMYHADDGENIQQISEVKLSSSVNFSAPHQRLFAGQF
DRNGAFRLRVATLQHQERLRASSAQGLIGARTQHLPHQIYIAHEVASRHAPRVLLADEVG
LGKTIEAGLILHYQLHTGRAKRALIVVPDSLIHQWLVEMLRRFNLRFSIIDQGRYDALAE
NEDDVDALVNKVFGDAFSVNPFESDQLVLCSLDFLKSSPQAQKDAVAAGWDLMVVDEAHH
LAWSQEQVSPEYQLVEDLSAASRGLLLLTATPEQVGVASHFARLRLLDPARFHDLEAFRE
EEQQYEAINKVVRRLQDNGGSLAAEDRAALKNWLGDELAVLEKAPEPKQAIIDALLDRHG
TGRVLFRNTRAAIQGFPERRALPVPLPCPDSYQSHRFGLVNLAPARALDEEQWLAEDPRV
AWLEKTLASLKPAKMVVICAHASTAMALEHYLQLRAGIRSAAFHEHLSLIERDRAAAYFS
DTEQGAQALICSEIGSEGRNFQFAHHLVLFDLPANPDLLEQRIGRLDRIGQSDTIDIHIP
YLEGTVQEAQFRWFHEGLNAFNESCSVGVAVQDKVQAEWQRVVDGGFTELDAVLKESRAE
AGRLHALLQNGRDALIEMNSCRRDVATDLIRQIEEEEGSAAVRDYMVEAFDILGVDMEDH
SEHADVLRPGEHYHAGHVSELPEDGLTVTWSRQQALEREDMAFMSWEHPLVTGVMDSVTS
SGLGKAALASLSVKALPPGTLLLEALFTVHCPAPESLQLSRYLPVSPLRLLVDVNGRDLS
AALPHDRLNDLCSNIRRRTAQAVVPQIRPQVETMVDHAERLADPHLEPMREKALEQLSRM
FEPEIRRLEALKKVNPAIRDEEIGFFQDQFQAAKSALTQASLSLEGIRVIVTA
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
ttggacgcatcggattttgttatcggccagcgctgggtcagccatagtgacaccggcctc
gggctaggaattgtcaccgatatttcggggcgacgggtgacgctcgggttcccggccgcc
gacgaagaacgcacctacgccattgataacgccccgctgtcccgcatcatttaccagatc
ggtgaggagatcgagaccttcgatggcgatcgctacaccgtgcaggcggtggaagacctg
ggtggcgtcctgatgtaccacgcggacgatggcgaaaacatccagcagatctccgaagtc
aaactgagcagttcggtgaatttctcggcaccgcaccaacgcctgtttgccggtcagttt
gaccgtaacggggctttccgactgcgcgtcgcgaccctgcagcaccaggagcgtttacgg
gcatcctcggcccagggcctgatcggggcacgaacccaacacctgccgcatcagatctac
atcgctcacgaggtcgccagccgtcatgcgcccagggtgttgctggccgatgaagtaggt
cttggcaaaaccatcgaagcgggtctgattcttcattaccagttgcataccggtcgtgcc
aaacgggcattaatcgtggtgcctgattcactgattcaccagtggctggtggaaatgctg
cggcgtttcaacctgcgtttctccatcattgatcagggccgttacgatgccctggccgaa
aacgaggatgacgtcgacgccctggtcaataaagtgttcggggatgcgttttcggttaat
ccgtttgaaagcgatcaactggtgctgtgcagcctcgattttctgaagtccagcccgcag
gcgcagaaggacgccgtcgcggcgggttgggacctgatggtggtggacgaggcccaccat
ctggcctggagtcaggaacaggtgagcccggaataccagttggtggaagatttgtcggcg
gccagtcgcgggttattgctattgaccgcgacaccagagcaggtgggtgtagccagccac
tttgcccgtttacgcctgctggaccccgcccggttccacgacctggaagcctttcgtgag
gaagagcagcagtacgaagccatcaacaaggtggtgcgtcggctgcaggataacggtggc
agtctggctgcggaagaccgcgccgccctgaagaactggttgggggatgagctggcggta
ctggaaaaggcccccgaaccgaaacaggccatcattgatgccctgctggatcgccacggc
accggtcgcgtgctgttccgtaacacccgcgcagccattcagggctttccggagcggcgc
gccctgcctgtacccctgccatgtcccgacagctatcagtcccaccggtttggcctggtc
aatctggcgccggcacgcgcgcttgacgaagaacaatggcttgcggaagatccccgggtc
gcctggctggagaaaaccctggccagtctgaagccggccaagatggtggtgatctgtgcc
cacgccagcacggcgatggctctggagcattatttgcagctgcgggccggtatccgcagt
gccgcgtttcacgaacacctcagcctgatcgagcgggatcgggcagcggcctatttctcg
gacaccgaacaaggcgcacaggcgctgatctgctccgagattggcagtgaggggcgcaac
ttccagtttgcccaccatctggtgttgtttgacctgccggccaatcccgacctgctggag
cagcgtattggtcgtctcgaccgtatcggtcagtccgacaccatcgatatccatatcccc
tacctggaaggtaccgttcaggaagcccagttccgctggttccatgagggactcaatgcc
ttcaatgagagttgttccgtaggtgtggcggtccaggataaggtgcaggccgaatggcag
cgtgtggtggatggcgggtttacagagctggacgccgtgttgaaggaatcccgtgcggag
gccgggcgtctgcacgcattgctgcagaatggccgtgatgcactgatcgagatgaattcc
tgtcgccgcgatgtggcgaccgacctgatccgacagatcgaagaggaagaaggctccgcc
gcagtgcgggactacatggtggaagcgttcgatatccttggcgtggatatggaagatcat
tccgagcatgccgatgtactccggcccggcgaacactaccatgccggacatgtgtctgaa
ttaccggaagacggcctgacggtcacctggagtcgccagcaggcacttgagcgcgaagac
atggcgttcatgagctgggaacacccactggtaaccggcgtgatggactcggtgaccagc
tccggcctcggcaaggccgctctcgccagcctgtcggtcaaggcgctgccgccaggcaca
ctgttgctggaagccttgttcacggtccactgcccggcgccggagtcgctgcagttgtca
cgatacctgccggtgtcgccactgcgcttgctagtggatgtcaatggtcgcgatttgtcc
gccgccttgccccatgaccgtctgaacgacctctgttccaatatccgccgccgcacggcc
caggcggtggtgccgcaaatccgcccccaggtagaaaccatggtcgatcacgccgaaagg
ctggcggaccctcacctggagccgatgcgtgagaaagcactggaacagttaagccggatg
tttgaacccgaaatccgtcgccttgaagcgctgaagaaagtgaatccggccatccgggac
gaggaaatcggatttttccaggatcagttccaggcggcaaaatcggcactcacacaggcc
agtctgtcgctggaaggtattcgtgtgattgtaactgcctga
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