Marinobacter sp. NP-4(2019): EHN06_18695
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Entry
EHN06_18695 CDS
T09527
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
manp
Marinobacter sp. NP-4(2019)
Pathway
manp03420
Nucleotide excision repair
manp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHN06_18695
03430 Mismatch repair
EHN06_18695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manp03400
]
EHN06_18695
Enzymes [BR:
manp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHN06_18695
DNA repair and recombination proteins [BR:
manp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHN06_18695
MMR (mismatch excision repair)
Other MMR factors
EHN06_18695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AZT85414
UniProt:
A0A3Q9NKR2
LinkDB
All DBs
Position
complement(4094351..4096516)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSHIIDALNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMQVDRVPPTGILAV
TFTNKAAREMRYRIEQMMDIPARGLWFGTFHGIAHRLLRSHWQDAGLPENFQVLDSDDQL
RLIKRVMRELQIDESRWPPKQAQWFINSHKDEGLRADHIQENPGDHFTSTMLTVYRQYEK
LCQQSGLVDFGELLLRSHELWLHRPELLAHYQNRFQHILVDEFQDTNTIQYAWLQVLASN
RVPLTIVGDDDQSIYGWRGAKIENIQQYQRDFPNARLVRLEQNYRSTQLILKAANSVIAN
NQGRLGKELWTDGPDGEPISLYAAFNEQDEANYIADTISGWVQDGNLRSESAILYRSNAQ
SRVLEEALMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVHYRRDDAAFERVVNVPARGIG
AKSLAELREVATGQSISLWEAAERLLEAGLMKGRAKTGLQSFMAIINDLSEMVDDASLHG
LMKQTIEASGLKDYHASEKGEKGQARVENLEELVNALSDFEVEDGVDPLAEFIAQAALDA
GESQADSHEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHSMSLEEPGRMEEERRLAYVG
ITRAMKKLVLTYAESRRLYGQEKFHALSRFVREIPGDCIQEVRLRNTVTRPAMLERPNES
LFSQDSAAQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFDEGAKWLVLAYAPLEA
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacattatcgacgccctcaacgacgcccaacgcgaggccgtgaccgcc
cagaacgaccacctgctggtgctggccggtgccggcagtggcaaaacgcgggttctggtg
caccggattgcgtggttgatgcaggtggaccgtgtgccgccgacggggattctggcggtg
acctttaccaacaaggccgcccgggagatgcgttaccgcatcgagcagatgatggacatc
ccggcccgtggcctgtggttcggcaccttccatggcatcgcccatcgcctgttgcgctcg
cattggcaggatgccggcttgccggagaatttccaggtgctggacagcgacgatcagcta
cggctgatcaaacgggtgatgcgggagctccagattgatgagagccgctggccaccgaag
caggcccagtggttcatcaacagccataaggatgagggcctgcgggcggatcatattcag
gagaatccgggggatcatttcacctccaccatgctgaccgtgtaccgccagtacgaaaaa
ctgtgccagcaaagcggcctggtggattttggtgaactgttactgcgctcacacgaactg
tggctgcaccggccggaattgctggctcactaccagaaccgcttccagcacattctggtg
gacgagttccaggacaccaacacgatccagtacgcctggttgcaggtattggccagtaac
cgcgtgcccttgaccatcgtcggggacgacgatcagtccatctacggttggcggggcgcg
aaaatcgagaatatccagcaataccagcgggatttccccaacgcccggctggtccggttg
gagcagaattatcgctccacgcaactgatcctcaaggcagccaattcggtgattgccaac
aaccaggggcgcctgggcaaggagttgtggaccgacggccccgatggagaaccgatcagc
ctctacgccgcgttcaacgaacaggacgaagccaactacatcgccgacaccatttccggc
tgggtgcaggacggcaacctgcgcagcgaatcggccattctctatcgctccaacgcccag
tcccgggtactggaagaagcgctgatgcgtcagggcataccttaccgggtttacggtggt
ttacgcttctatgatcgccaggaaatccgtaacgctttggcatacctgcgtctggtgcat
taccgccgtgacgatgccgccttcgagcgggtggtgaatgtgccggcgcggggcatcggc
gcgaaaagtctggcggagctgcgggaagtggccaccggccagagtatctccctgtgggag
gccgcagagcggctgctggaagcggggttgatgaaggggcgcgccaaaaccggattgcag
tcgtttatggcaatcatcaacgatctgtcagagatggtggacgacgcctccctgcatggc
ctgatgaagcagaccatcgaagccagcgggctgaaggactaccacgccagtgagaagggc
gagaaaggtcaggcccgggtggaaaacctggaggaactggtcaatgcgttgtcggacttt
gaggtggaggacggcgtcgatccgctggcggagttcatcgcccaggcggcgttggatgcc
ggagaatcccaggctgattcccatgaggacagcgtccagttgatgacgctccactccgcc
aaggggcttgagttcccgctggtgtttcttgcgggtgtggaggaagggttgttcccccac
agcatgtcgctggaggagccggggcgaatggaggaagaacggcggttggcgtatgtgggg
attacccgagcgatgaaaaagctggtgctcacttacgcggaatcccgccgtctgtacggg
caggagaagttccacgcgttatcacggtttgtgcgggaaattccgggggactgcatccag
gaagtgcggctgcgcaataccgtaacccgcccggcgatgctggagcggcccaacgaaagc
ctgttcagtcaggactcggcggcgcaatctggtttcagcctggggcagcgggtgcgtcat
ccgaagttcggagaaggcattgtgatgaattccgaaggcacggggcatcacacgcgagtg
caggtcaatttcgacgaaggcgccaagtggctggtactggcctatgctccgctggaggcc
tgttga
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