Marinobacter sp. NP-4(2019): EHN06_18745
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Entry
EHN06_18745 CDS
T09527
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
manp
Marinobacter sp. NP-4(2019)
Pathway
manp03420
Nucleotide excision repair
manp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHN06_18745
03430 Mismatch repair
EHN06_18745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manp03400
]
EHN06_18745
Enzymes [BR:
manp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHN06_18745
DNA repair and recombination proteins [BR:
manp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHN06_18745
MMR (mismatch excision repair)
Other MMR factors
EHN06_18745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
ResIII
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
AZT85423
UniProt:
A0A3Q9NNN4
LinkDB
All DBs
Position
4107287..4109608
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AA seq
773 aa
AA seq
DB search
MSDRYPHYQSPATIAPMQTQPHTADTTELPDYLTDEQRAIITAGYEHSVITAVAGSGKTS
TLAWRIRYLLQQGHAPERMLVLMFNRSARTDFERKLQAVCSQSGLATPEVRTYHAMGLRL
YKRFVREGYLPGFSDKILSEQEINYQAWQLTRRLAPEDLADDIRRNKKDFVETATSFIDL
VKTTLSPVEVVFEELGYSDKHRYLIDLFHAFEQWRKSQSRISYADMLYEPVMAIHQNQPL
QRLVGNKMDLILVDEYQDTNEIQHLLLRYVAGERARVTVVGDPDQTIYEFRGAKPEFILK
RFSDEFESPLEQTLSYSFRYGHQVALLANHLICNNTGRKDVLCHAHPSTPDTTISLHESG
SDSDTVLDILQRQSPEQRVDTAILFRVWSQSVPIELKLLARQIPYRIDAGKGALFSREIQ
AVGALLTVIAGKLDNLPPDDRLSIARQLLRFPHIGLKEPELEQLASFLSGFGTGWHERLL
AMDFDALAPMAARKLRKLGEVLARLQGYRGPVSNAIAVYAEHTDLYEGIRSLALTHEAAD
ERIDTIHGFRDYLKGLDVDASGALQHLKALKKQASEAASHGVLLSTIHRTKGLEWPIVIL
PGLQEKYLPYSPRAEDDPRAFMESERRLLYVAMTRTRNHLHLITRPASTQPHLDGDLGPS
RFISELCFPLSAEFGAWLDQRSAGNSTAFRANSPLTSIANRYADREAVTLEGTQQAPKAS
SAPLWARNRLSHTIFGEGVVIAEDDSAFEVRFDSGETLNFSKKSAHLYFTVVA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccggtatccgcactaccagtcgcccgctacaatagcgcccatgcagacccaa
ccccacacagctgataccaccgaactgccggattatctcaccgatgagcagcgggcgatc
atcaccgccggctacgagcattcggtaattaccgccgtggccggcagcggcaagacatcg
acactggcctggcgcatccgctatctcctgcagcagggccatgcccccgagcgcatgctg
gtactgatgttcaatcgcagcgcccgaacagactttgagcgtaagctgcaggcggtgtgc
agtcaaagtgggctggcaacgccggaagtccgcacctatcacgccatgggcctgcgcctg
tacaaacgcttcgtgcgggagggctatctgccgggcttctccgacaagatcctgagcgag
caggaaatcaactatcaggcctggcaactgacccgtcgactggcaccggaagacctggcc
gatgacatccgccgcaacaagaaagacttcgtggaaaccgccaccagcttcattgatctg
gtgaaaaccacactgtccccagtcgaagtggtgtttgaggagctcggctattccgacaaa
caccgttacctgatcgacctgttccacgccttcgaacagtggcgcaaaagccagagccgc
atcagctacgccgacatgctgtatgagccggtgatggcaattcaccagaaccagccgttg
cagcgcctggtgggtaacaagatggacctgatcctggtggacgagtaccaggacaccaac
gagatccagcacctgttgttgcgctacgtcgccggggaacgggcgcgggtgacggtggtg
ggtgatcccgaccagaccatttacgaatttcgcggcgccaaaccggagttcattctcaaa
cggttcagcgacgaattcgaaagcccgctggaacagacgctgagctacagcttccgctac
ggccaccaggtcgccctgctggccaaccacctgatctgcaacaacaccggtcgcaaagac
gtgctttgtcacgcccacccttcaacgccagacaccacgatctccctgcacgaatccggc
agtgacagcgacaccgtactggacatcctgcagcgacagtcccctgaacagcgggtggat
acggccattctgttccgggtctggagccagagcgtgcccattgaactgaaattgctggcc
aggcaaattccctaccgtatcgacgctggcaaaggcgctttgttcagccgtgaaattcag
gcggtcggggcactgctgacggtcatcgccggaaaactggataacctgccaccggacgac
cgtctgagcattgcgcgacaactcctgcgctttccccacattggtctgaaggaaccggag
ctggagcaactcgccagtttcctgtccggtttcggcaccggttggcatgaacggctgctg
gcaatggacttcgacgcgctggcccccatggcggcgcggaaactgcgcaaactgggcgaa
gtgctggcccgtctgcagggctatcggggccccgtgtccaatgcgattgcggtctacgct
gaacacacggatctgtacgagggtatccgcagcctcgcattgacccacgaagccgcggat
gagcgaatcgacaccatccacggcttccgtgactacctgaaaggtctcgacgtggacgcc
agcggtgccctgcaacacctcaaggccctgaaaaaacaggccagcgaggccgccagccac
ggcgtactgctatccaccatccatcgcaccaaggggctggaatggcccatcgtcatcctc
cccgggctgcaggaaaagtacctgccctacagcccccgggccgaggatgatccccgtgcc
tttatggagagtgagcgccggctgttgtatgtggccatgacccggacacgtaaccacctg
catctgattacccgccccgccagtacccagccccacctggatggcgatctgggccccagc
cggttcatcagtgagctgtgcttcccgctgtcggccgagtttggcgcctggcttgatcaa
cggtccgccggaaattccacagccttccgggcgaactcgccactgacgtcaattgccaat
cgttatgcggaccgtgaggcggtgacactcgaaggtacacagcaggcccccaaagccagc
agcgcaccactgtgggcccgaaatcggctgagtcacacgatattcggagaaggggtggtt
atcgcggaagacgacagcgcgttcgaagtgcgcttcgattccggcgaaaccctgaacttc
agcaagaaaagcgcgcacctgtactttaccgtcgtggcctga
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