Methanomicrobium antiquum: L1994_00120
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Entry
L1994_00120 CDS
T08973
Name
(GenBank) DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
manq
Methanomicrobium antiquum
Pathway
manq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
manq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L1994_00120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manq03400
]
L1994_00120
Enzymes [BR:
manq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
L1994_00120
DNA repair and recombination proteins [BR:
manq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L1994_00120
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
WFN36838
UniProt:
A0AAF0JTV9
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Position
complement(20631..21467)
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AA seq
278 aa
AA seq
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MDCFFVPENTSFSLSETLSCGQVFRWHEINGWWEGIAHGRLIRVRQKENKIEYSGCDEDF
LVYYFHLDADLEEILSSVNRDEHINNAIKEHFGLRILRQDPWECLLTYICAQNANIPFIE
RMLSNMSQLCGDKITTEFGEGFAYPTPYHLSNLCQSDISGCSTGYRSSYICETAYEISKD
KKWSEKILKPDYEQARKEIMKYKGIGMKVADCILLFGFQKYEAFPVDRWVDRIMHGFYGI
GKPDKPLSCGEYEKIRKFGQEYFGRYAGYAQEYLFAGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggactgcttttttgttcctgaaaatacttccttttccttatcagaaacactctcatgc
ggtcaggttttcaggtggcatgaaattaacgggtggtgggaggggatagctcacggtcgg
cttataagagtccggcaaaaagagaataaaattgaatactccggttgtgatgaggatttt
ttggtttattactttcaccttgacgcagaccttgaagaaatactctcatccgttaacaga
gatgagcacataaacaatgcaataaaagagcatttcggccttagaattttaagacaggac
ccatgggagtgccttttgacatatatctgtgcccaaaacgccaatatcccttttatcgag
cggatgctttctaatatgtcacagttgtgcggcgataaaataacaactgaatttggagaa
ggctttgcctatccaacaccatatcacctttcaaatctctgccaaagtgatatttcagga
tgttctacaggttaccgttcatcatacatctgtgagactgcatatgaaatttctaaagat
aaaaaatggtctgaaaaaattttgaagcctgattatgagcaggcaagaaaagagattatg
aaatacaaaggcatcggaatgaaagttgccgactgtatccttcttttcggatttcaaaaa
tatgaggcatttccggttgacagatgggttgacagaataatgcatggtttctatggtata
ggaaaaccggataagccgctttcatgtggagagtatgaaaaaatcagaaaattcgggcag
gaatatttcgggcgatacgccggttatgcacaggagtatctcttcgccggacggtag
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