Methanomicrobium antiquum: L1994_01040
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Entry
L1994_01040 CDS
T08973
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
manq
Methanomicrobium antiquum
Brite
KEGG Orthology (KO) [BR:
manq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
manq03016
]
L1994_01040 (endA)
Enzymes [BR:
manq01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
L1994_01040 (endA)
Transfer RNA biogenesis [BR:
manq03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
L1994_01040 (endA)
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
PH_trem
PepSY
Motif
Other DBs
NCBI-ProteinID:
WFN37011
UniProt:
A0AAF0FSB4
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Position
complement(218599..219597)
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AA seq
332 aa
AA seq
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MIGKLEGEWIILKDDEISLYEHGGYGRPEGETLKLAPEEALYLIGRNKIKVENYTFTSLL
SLFCKNSAFLRKFLVYRDIRERGFVIQAGPHDFRVFKRGQKPGKGTSYYLIRVLSERDIV
NFERIIQEAKSAHNMRKIFLLAVADDEEEITYYEIKINTPPDGGKPEINEKIKGTVYANT
VLIKAEPDSVFESSLYGKRFDKEHRALSSVESLYLIKRGIIELESKNACEEFYRCALDSD
HELKEKLAVYTDLRNLHNIPKTGYKFGHHFRVYSGGKMHSEVLVHALREGETMPMSVISR
SVRLAHSVRKKMLFACVNKDSIQYIEFARMKL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgattggtaaattagaaggtgaatggataatcttaaaagatgatgaaatttccctgtat
gaacatggaggatacggaaggcctgaaggcgaaaccttaaaacttgcacccgaagaggca
ctgtatctaataggaagaaacaaaataaaagttgaaaattatacatttacaagtctttta
tcattattctgtaaaaattccgcatttctgcgaaagtttctcgtctaccgtgacatccgc
gaaagaggatttgtcatacaggcagggccgcatgatttcagggtttttaaacgcggtcaa
aaaccgggaaaaggaacatcctactacttaatacgggttttatccgagcgtgacatcgtc
aacttcgaacgaattattcaggaagctaaaagtgcacacaacatgagaaagatttttttg
ctcgcagtcgccgatgacgaagaagaaattacctactacgaaataaaaataaacactcct
cctgacggcggaaaacctgaaataaacgagaaaataaaaggcacagtctatgcaaacacc
gttttaataaaagctgagcctgactcagtatttgaatcatcactctacggcaagagattt
gataaagaacatcgtgcattatcttcggttgaatcactctacctcataaaaagaggcata
attgaacttgaaagcaaaaacgcatgtgaagaattttacagatgcgccttagactcagat
cacgaacttaaagaaaaacttgccgtatatacagaccttcgaaaccttcataacattcca
aagacaggctacaaattcgggcatcatttcagggtttattcaggcggaaaaatgcattca
gaggttttggtacatgcattaagagaaggtgaaacaatgccgatgagtgtcatatcacgc
tcagtcaggcttgcacacagcgttcgcaagaagatgctttttgcctgtgtaaataaagac
tctatacagtacatcgaatttgcaagaatgaaattataa
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