Methanomicrobium antiquum: L1994_01535
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Entry
L1994_01535 CDS
T08973
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
manq
Methanomicrobium antiquum
Brite
KEGG Orthology (KO) [BR:
manq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manq03019
]
L1994_01535
Messenger RNA biogenesis [BR:
manq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L1994_01535
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
WFN37104
UniProt:
A0AAF0JLV0
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All DBs
Position
complement(324859..325902)
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AA seq
347 aa
AA seq
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MIKKIYVNSIIPKMAVDSAFLIENPTLRTGKNNKYIACSISDNTGKISCKIWGQYNSGAC
DIEEVFNALAENEGQIFRISGKADKYNNDLNINVNDGIEYLKNPVDIKKITPSDYIYSPA
NIKENRDKILKLCESVKNRGLKDLLQTVIKKSEGFFEKPAAKSRHHDYTGGLCEHTLEVA
EISLSIGRNLAGINLNYDILIAGAILHDIGKCQSFDKKGLYYAPNPSYSLLGHITPAMQT
LSRYRAFVDEGTYLELLHIIQSHHGEHGETRPQTPEAWIVHFADNISATLHEISEDLKPA
ERGELLWGKRMDGFVFKSDSYEENSEKVNSSESSKKDMTTLDCFNSE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ttgataaaaaaaatatatgtaaactctataatcccaaagatggctgttgattcagctttt
ttaattgaaaatccgacacttaggacaggaaagaacaataaatacattgcatgcagtatc
tcagacaataccggaaaaatatcgtgcaaaatctgggggcagtataattcaggagcatgt
gacatagaagaggtctttaatgcacttgcagaaaacgaagggcagatattcagaatatca
ggaaaggctgacaaatacaacaacgacttaaatatcaatgtaaatgacgggatagaatac
ctgaaaaatccggttgacataaaaaaaattacaccttctgattacatctattctcctgcc
aatattaaggaaaaccgggataaaattttaaagctttgtgaatcggtaaagaaccggggg
ttaaaagatcttttacagacagtaattaaaaaatcagaaggcttttttgaaaaacctgcg
gcaaagtcaaggcaccatgactatacaggaggtctttgtgaacacaccctggaagttgca
gagatttcactttcgattggaagaaaccttgcaggtataaatttaaattatgatatttta
attgcaggcgcaattttgcatgatattggcaaatgccagtcctttgataaaaaaggtctt
tattatgcaccaaatccatcatactcactattaggacatattactcctgccatgcagaca
ctttcgagatatagagcatttgttgacgaaggcacctatcttgaacttttacatattatt
cagtcacatcacggtgaacatggtgaaacaaggcctcagacacctgaagcatggattgtt
catttcgcagacaatatcagcgcaacactccatgagatttcagaagatttaaaaccggct
gaaaggggtgaacttttatggggaaaaagaatggatggttttgtttttaagtcagattca
tatgaggaaaactctgaaaaggttaattcttctgaaagctccaaaaaagacatgacaact
ctggactgcttcaatagtgaataa
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