Methanomicrobium antiquum: L1994_04570
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Entry
L1994_04570 CDS
T08973
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
manq
Methanomicrobium antiquum
Brite
KEGG Orthology (KO) [BR:
manq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
manq03016
]
L1994_04570
Enzymes [BR:
manq01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
L1994_04570
Transfer RNA biogenesis [BR:
manq03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
L1994_04570
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GFIT
Motif
Pfam:
Radical_SAM_C
ELP3_N
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Linker_histone
Motif
Other DBs
NCBI-ProteinID:
WFN37666
UniProt:
A0AAF0FT61
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Position
921223..922845
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AA seq
540 aa
AA seq
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MLPVRVLKRLPLKTNPADYNTILREIISRILSEAKSSSDVQKIKASVAKKYSLNSFPRNS
ELFSAALDSEKEDLRNFVQVKPSRTISGVAPVAVMTSPHPCPHGICLPCPGGPENELFKS
PQSYTGEEPAALRGKQLEYDPYAQVQARLSQFEMLGHHIEKAELIVMGGTMTARDPEYQE
WFMRSCIRAMNEYGKEDRGDIFTFEELCTENEKSRVRCIAVTFETRPDWCKKEHIDRMLS
LGVTKVELGVQSLDNSILEFNRRGHFVEDSVLANCSLRDAGIKVGFHVMPNLPSATIEDD
KKMFDTLFSDERFCPDFIKIYPTLVTPGSEIESLWKRGEYKVYDEDELVSLVAYGKSKLP
EYVRLQRVQRDIPAKLIVAGSHFSNFRQLAKNRLLENGGQCRCIRCREAGRNVITGEPVI
EIVEYRCCGGTEYFIQAVADDCLVGFVRLRLPKNPWREELKNSALVRELHVYGALVPLSE
KGSGNRWQHRNYGDRLLKIAEDISKEKGYGCVSVMSGIGVRPYYNKRGYERRGPYMVKEF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcttccggtgcgggttctgaagaggttgccgttgaaaactaatccggctgactacaac
actattttaagggagattatttcccgcattttatctgaagcaaaatcatcatctgacgtt
cagaagataaaggcctctgtagcaaaaaaatattcactgaattcatttccaagaaattca
gagctattttctgccgcacttgattctgaaaaagaagatttgaggaattttgttcaggta
aagccgtcccgcacaatttcaggagtagctcctgttgctgtgatgacatcaccccatccg
tgtccgcatggaatctgcctcccgtgtccgggaggtccggaaaatgaactgtttaaatct
ccacagagttatacgggtgaagagcctgcggcacttcggggaaaacagcttgaatacgat
ccatatgctcaggttcaggcaagacttagtcagtttgagatgcttggtcatcatatcgaa
aaggctgaactgattgtaatgggaggcaccatgacggcgcgtgatcctgaatatcaggaa
tggtttatgcgttcgtgcattcgtgcaatgaatgaatacggtaaagaagaccgcggtgat
atttttacatttgaagaattatgcaccgaaaatgaaaaatcaagggttcgctgtatagca
gttacttttgaaacaagaccggactggtgcaaaaaagagcatattgacaggatgctttca
cttggtgttacaaaagtagagcttggtgttcagagtcttgacaacagtattcttgaattt
aacagaagagggcactttgttgaggattctgtacttgcaaactgttcgctaagagatgca
ggaatcaaagttggttttcatgtaatgccaaatcttccctctgcaacaattgaagatgac
aaaaaaatgtttgacacacttttttctgatgaaagattctgtccggatttcatcaaaatc
tatcctacacttgtaactcctggttctgagattgaaagtctctggaagaggggagaatac
aaagtctatgatgaggatgaacttgtcagtcttgttgcttatggaaaatcaaaattgcct
gagtatgtgcgtcttcaaagagtacaacgtgatatacctgcaaaattaattgttgcaggt
tcacatttcagcaatttcagacagcttgcaaaaaaccgtcttttggaaaacggcggccag
tgcagatgtataagatgccgcgaagccggcaggaatgtaataaccggtgagccggtcatt
gaaattgttgagtacagatgttgtggaggtacagagtatttcattcaggctgttgctgat
gactgtcttgtgggctttgtgaggttaagacttcccaaaaacccctggagggaagaattg
aaaaattctgcacttgtgcgtgaacttcatgtatatggagcccttgtacctctctcagag
aaaggttcgggcaacagatggcaacacaggaattatggcgatcgccttttaaagattgca
gaagatatttcaaaagagaaaggttacggctgtgttagcgttatgagtggtattggtgtc
agaccttattacaataaacgcggatatgaaaggcgcgggccgtatatggtaaaggaattt
taa
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