Methanomicrobium antiquum: L1994_05305
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Entry
L1994_05305 CDS
T08973
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
manq
Methanomicrobium antiquum
Pathway
manq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
manq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L1994_05305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manq03021
]
L1994_05305
Transcription machinery [BR:
manq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
L1994_05305
Prokaryotic type
Archaeal type
TFE
L1994_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
SR1P
Zn_ribbon_TFIIS
Cas12f1-like_TNB
Zn_ribbon_SprT
Phage_rep_org_N
HTH_9
Motif
Other DBs
NCBI-ProteinID:
WFN37803
UniProt:
A0AAF0FP12
LinkDB
All DBs
Position
complement(1074319..1074840)
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AA seq
173 aa
AA seq
DB search
MVAQEDILKNDAIRAYLLRMIGEEGMELLEKFPPEGEYSDEDLAEKTQINLNTVRHTLYT
LYGKRLAEYRRIKNSETGWLTYLWVLKLGNIDSCLDEDIDAVLEILETREQYETMNDFYM
CPGCGLRYTFDEALNRDFVCQNCDLKMEHFDNELIAEALKRRVDKIKENLGRV
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggtagcacaggaagacatactaaaaaatgatgcaatccgggcttatcttcttcgaatg
ataggagaagaagggatggaactgcttgaaaagtttccgccggagggtgaatacagtgat
gaggatcttgctgaaaaaacacagataaatctcaatacagtcaggcatactctatatact
ctttatgggaaaagacttgcagaatacaggagaattaaaaattccgagacaggatggctg
acatatttatgggtattaaagcttggaaatattgacagctgtcttgatgaggatatagac
gcagttttggaaattcttgagacaagagagcagtatgaaactatgaatgatttctacatg
tgcccgggatgtggccttagatatacttttgatgaggctctgaaccgtgattttgtctgc
cagaattgtgatttaaaaatggaacactttgacaatgaacttatcgcagaggcactgaaa
cgccgtgttgacaaaattaaagaaaatctgggcagggtttga
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