Methanomicrobium antiquum: L1994_06055
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Entry
L1994_06055 CDS
T08973
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
manq
Methanomicrobium antiquum
Pathway
manq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
manq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L1994_06055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manq03000
]
L1994_06055
03021 Transcription machinery [BR:
manq03021
]
L1994_06055
Transcription factors [BR:
manq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
L1994_06055
Transcription machinery [BR:
manq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
L1994_06055
RNA polymerase III system
TFIIIB
L1994_06055
RNA polymerase I system
SL1/TIF-1B
L1994_06055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
WFN37979
UniProt:
A0AAF0FSZ4
LinkDB
All DBs
Position
complement(1216398..1216952)
Genome browser
AA seq
184 aa
AA seq
DB search
MDGKKYESLKIENIVASGQIADSINLEEVSRQIPNCELNKKRFPGAVFRVEDPKVASLIF
SSGKIVLTGIRRKEDLKTGLDIIINSLKKINVKTFEKNDVSITNIVCSYDMKKPVNLNRI
VVTLDLENIEYEPEQFPGLVYRIDDPKIVALIFSSGKIILTGGKNLDDVKGGLDVLEQKL
ESIM
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaaaaaatacgaatccttaaaaattgagaatattgtagcttctggtcagatt
gcagattcaataaatttagaagaagtatctcgtcagattccaaattgtgaattaaataaa
aaacgtttcccgggagctgtcttcagagttgaagaccctaaagttgcatctcttatattt
tcgtcaggaaaaatagtgcttaccggcatccgaagaaaagaagacttaaaaaccggtctt
gatattataataaattcgcttaaaaaaatcaatgtaaaaacatttgagaaaaatgatgtt
tcgataacaaacatagtttgctcgtatgatatgaaaaaaccggttaatttaaacaggatt
gtcgtaactttggatcttgaaaatatcgagtacgaaccggaacagtttccgggacttgtt
tacagaatagatgatccaaaaattgtggcactgattttttcatcaggaaaaataattctt
acaggaggaaaaaatcttgatgatgtcaaaggcggacttgatgtcctggaacaaaagctt
gaatcaataatgtaa
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integrated database retrieval system
