Methanomicrobium antiquum: L1994_06430
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Entry
L1994_06430 CDS
T08973
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
manq
Methanomicrobium antiquum
Pathway
manq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
manq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
L1994_06430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manq03019
]
L1994_06430
03009 Ribosome biogenesis [BR:
manq03009
]
L1994_06430
04131 Membrane trafficking [BR:
manq04131
]
L1994_06430
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
manq04147
]
L1994_06430
Messenger RNA biogenesis [BR:
manq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
L1994_06430
Ribosome biogenesis [BR:
manq03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
L1994_06430
Membrane trafficking [BR:
manq04131
]
SNARE
SNARE associated proteins
Others
L1994_06430
Autophagy
Aggrephagy
Other aggrephagy associated proteins
L1994_06430
Exosome [BR:
manq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
L1994_06430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_14
AAA_5
AAA_22
TIP49
AAA_33
nSTAND3
AAA_28
RNA_helicase
NPHP3_N
AAA_7
IstB_IS21
Mg_chelatase
Parvo_NS1
AAA_18
ABC_tran
DUF815
ATPase
Sigma54_activat
AAA_24
NB-ARC
AAA_17
AAA_3
Zeta_toxin
PhoH
bpMoxR
AAA_19
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
WFN35798
UniProt:
A0AAF0FSL2
LinkDB
All DBs
Position
complement(1293965..1296457)
Genome browser
AA seq
830 aa
AA seq
DB search
MNNSQSFEVTVKEALHEDAGRGIARISIDVMNALDLRSGDVIEISGKNKAAAIVWTGYSQ
DTGKAIIRIDGNIRGNIQTGIDEKVTIRKVDAKYAEKVVIHPTQPISLRGGEQYIGRLLS
GRPVSEGQAFRVNIMGNALTFVISKVKPSGVAIVGPETEIEIKDTPYEPKEGSKKDVPDV
HYEDIGGLGRELDQVREMIELPLRHPEIFEKLGIEPPKGVLLYGPPGTGKTLIAKAVANE
VDAHFMTLSGPEIVSKYYGESEGKLREVFEEAQKNAPTIIFIDEIDSIAPKREETKGEVE
RRIVAQLLSLMDGLKGRGEVIVIAATNLPDNIDPALRRGGRFDREIEIGIPDRKGRLEIF
QVHTRGVPLDLSEISISSEESVELSRKFAEMGETEGKKHEDEIKRKKFLEPFSAVTHGFV
GADISLLVKEAAMHALREELRDIKTGEDIPIEIIEKIKVKRSDFEEALRHVEPSAMREVL
VEIPDISWDDIGGLEDIKKELTESVEWPLKYPEIFDKFDTKPPSGILLFGPPGTGKTLLA
KAVANKSECNFISVKGPELLSKWVGESEKGVRDIFRKARQASPSIIFFDEIDALLPKRGT
FEGSSHVTESVVSQILTELDGLEELKNVTVLGATNRPDMLDEALMRPGRLDRIIYVPPPD
AKGRKKIFEVYLKNSKSLLSEDISIDELVLQSEGYVGADIELVVREAKLQAMREFITLMD
SRTEEERQKVLDNVRVTKEHFNAAMKKIKSSLDKSAIEEYERKAWPVMYSTDERQILEKA
ASAIKRSEFGEDAEDKTECRKKLEKVTYSRLKDFEQIKKLTGELISKIEQ
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaataattcacagtcatttgaagtcacagtaaaagaagcactccatgaggatgcagga
agaggtattgcaagaatcagcattgatgtaatgaatgcacttgatcttagaagcggcgat
gtgatagaaatttccggaaagaacaaagccgccgccattgtctggaccggctattctcag
gacacaggtaaggcgattatccggattgacggaaatatccgtggaaatatccagacaggt
attgatgaaaaagtcactatcagaaaagtcgatgcaaagtatgctgaaaaggttgtaatt
catccaactcagccaatatcacttcgcggcggagaacagtatattggaaggctcctctcc
ggaagacctgtcagcgaaggtcaggcattccgtgtaaacataatgggaaatgctttgaca
tttgtcatatcaaaagtcaaaccttcaggtgttgcaattgtcggtcctgaaactgagatt
gagataaaagataccccctatgagccaaaagagggcagtaaaaaagatgttcctgatgtt
cattacgaagatatcggtggtcttggaagagaactggatcaggtaagggagatgatagag
cttcccttaagacatcctgaaatatttgaaaaattaggcattgagcctccaaaaggagtt
ttactctacggccctcccggaaccggaaagaccttaattgcaaaggcagtcgcaaacgaa
gttgatgctcatttcatgacactttccggtcctgaaatcgtaagcaaatattatggtgaa
agtgaaggaaaactaagagaagtctttgaagaggcgcaaaaaaatgctccgacaataatc
ttcatagatgaaattgattcaatcgcaccaaagcgtgaagagaccaaaggcgaggttgaa
aggagaattgtcgcccagcttttatccttaatggatggtcttaaaggaagaggcgaagta
attgtcattgcggcaacaaaccttcctgacaatattgatccggcacttcgccgtggcgga
cgatttgacagggagattgaaatcggcattcctgacaggaagggacgtcttgaaatattc
caggttcatacacgcggagttccgcttgacttatcagaaatttccatatcaagcgaagaa
agtgttgaactaagtcgtaagtttgcagaaatgggagaaaccgaagggaaaaagcatgaa
gacgagattaaaagaaagaaattcctcgagcccttttcggcagtcacacacggatttgta
ggagcagatatatccctgcttgtaaaagaggccgcaatgcatgcacttcgtgaagagtta
agggatattaaaaccggagaagacatcccaatagaaattattgagaaaataaaggttaaa
agaagtgactttgaagaggccctaagacatgttgagccttcagccatgcgtgaagtcctt
gttgaaatccctgatatttcctgggatgacatcggagggcttgaagatatcaaaaaagag
cttaccgaatctgtagaatggccgcttaaataccctgagatatttgataaattcgataca
aaaccgccttcaggaatccttctctttggccctccgggaacaggaaaaacgcttcttgca
aaggcggttgcaaacaaaagcgagtgcaatttcatatcggtaaaaggccctgagcttctc
tcaaaatgggtaggagaatctgaaaagggagtccgtgacatattcagaaaggcaaggcag
gcatcaccctcgataatattcttcgatgagattgacgctttgcttccaaaaagaggaact
tttgagggttcatctcatgtaacagaaagtgttgtaagtcagatattaactgaacttgac
ggtctggaagaacttaaaaacgtaacagtgcttggagcgacaaacagacctgatatgctt
gatgaagcccttatgagacctggacgtcttgacagaattatctatgttccaccgccggat
gcgaaaggaagaaagaaaatctttgaagtatatcttaaaaattcaaagagcctcctctca
gaagatataagcattgatgagcttgttttgcaaagtgaaggttatgttggtgcagatatt
gaacttgttgttcgtgaagcaaaacttcaggcaatgcgtgagttcattacactgatggac
agcagaactgaagaggaaaggcagaaggttttggacaatgtccgtgtaacaaaagagcac
ttcaatgccgcaatgaaaaaaattaagagttctcttgataaatctgcaattgaagaatac
gaaagaaaggcgtggcctgtaatgtattcaacagatgaaaggcagattctcgaaaaagcg
gcatcagcaataaagcgatcagaattcggcgaagatgcagaggataaaacagagtgcagg
aaaaagcttgaaaaagtcacatattcgagattaaaggactttgaacagattaaaaaatta
accggcgagttaatatccaaaattgaacagtaa
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