Methanomicrobium antiquum: L1994_06700
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Entry
L1994_06700 CDS
T08973
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
manq
Methanomicrobium antiquum
Pathway
manq03022
Basal transcription factors
manq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
manq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L1994_06700
09124 Replication and repair
03420 Nucleotide excision repair
L1994_06700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manq03021
]
L1994_06700
03036 Chromosome and associated proteins [BR:
manq03036
]
L1994_06700
03400 DNA repair and recombination proteins [BR:
manq03400
]
L1994_06700
Enzymes [BR:
manq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
L1994_06700
Transcription machinery [BR:
manq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
L1994_06700
Chromosome and associated proteins [BR:
manq03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
L1994_06700
DNA repair and recombination proteins [BR:
manq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
L1994_06700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
DEAD
nSTAND3
AAA_23
AAA_14
AAA_30
YvbH_ext
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
WFN35850
UniProt:
A0AAF0FKN0
LinkDB
All DBs
Position
complement(1351514..1353517)
Genome browser
AA seq
667 aa
AA seq
DB search
MDCPDDWFPYETYRPHQKEMLDLASECVSNNQICMIDAPTGSGKSSILSALIPKAKGKKI
LVAVRTVSQLNTFIRELELIKRKKGHLKVAYLVGKRKMCMMGGEGDIYRMCEGLKAFSTS
LMRDRAHRGSLIPANDPVLKTQLRHQDSEHPLLCPYFIRSKIYVEGGEGLKMVPSNSLKT
KAEQASRRIVSPEKIHEICGEICPYEVMLQAARDADVILLNFHHLFDETIREQMYQTIGI
EPENTILLIDEAHNCGETVQSIQTVTLSESSLELAQNELSHMRGRIGGVEAVLNLIPQIQ
NFMVSLKRSIKQEDWFDPSIFTRYILNGTLYQKTDEISDDLLRIAEAIREAKLEKGDFKE
SPVEKLTEFFIKILQSSGDDSYLTIYKKTDDQISLEVRNIDPSKTLSEIAKSHRSCIMIS
GTLSPVESYKLLYFGELDVKTLSLPNAFPKENRLIFCAKDITSAFSMRRDRDNQNRILDY
INTFAGLKGNLAVYFPSYDMLKTFTANIPKKLKGKDVFIESQDSAQATSDLKVFMSLPEV
NRSGIIFGVCGGKWSEGLDYRGEMLNGAIVIGLPLAPFNDVRKMINDYFKNKFGKEGEFL
SYTLPAINKAIQALGRVLRTPEDRGVLLLGEERFLDDSVKKGLPPWMQDELTECTINEFK
SGISKWR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggattgtcctgatgactggtttccatatgaaacatacagaccacaccagaaggaaatg
ctggatttagcctcggaatgtgtctcaaataatcagatatgtatgatagatgcacccacc
ggaagcggcaaatcaagtattctttcagcccttattccaaaagcaaaaggaaaaaagata
cttgttgcagtaagaacagtaagccagcttaataccttcatcagagagcttgaactaatt
aaaagaaagaaaggccatcttaaagttgcatatcttgttgggaaacgcaaaatgtgtatg
atgggcggagaaggcgatatttaccggatgtgtgagggattaaaagctttttcaacatct
ctcatgcgagatcgcgcgcatagaggttcactcattcctgcaaatgatcctgtgcttaaa
acacagcttcgccaccaggattctgaacatcctttgttatgcccgtatttcatccgctca
aaaatatatgtcgagggaggagaaggacttaaaatggttccttcaaactctctgaaaaca
aaagcagaacaggcctcaagaagaattgtttcgcctgaaaagatacatgaaatctgtggg
gaaatctgcccctatgaagttatgcttcaggcggcacgtgatgcagatgtaattttgtta
aacttccaccatctctttgatgaaacaataagagagcagatgtatcagacaattggaata
gaaccggaaaatacaattcttctgattgatgaagcccacaactgtggagaaactgtacag
agcattcagacggttacacttagtgagtcctcacttgaacttgcccaaaatgaactttca
catatgagagggaggattggcggagttgaagcagtgttaaacctaattccccagattcag
aatttcatggtgagtcttaaacgctcaatcaaacaggaggactggtttgatccatcaata
tttacaagatacatccttaacggcactttatatcagaaaaccgatgaaatatcagatgat
ctcttaagaattgcagaagcgatacgtgaagcaaagcttgaaaaaggagattttaaggaa
agtcctgtagagaagcttacagaattttttataaaaattcttcagtcctcaggtgatgat
tcataccttacaatatacaaaaaaacagacgatcagatatctcttgaggtcagaaatatc
gatccttcaaagacgctttccgaaatagccaaatcccatcgttcatgtattatgatatcc
ggcacgctgtctcctgttgaaagttataaactgctttattttggagaattggatgtaaaa
acattatcgcttccaaatgcttttccaaaagaaaacagacttattttctgtgcaaaagac
attacatccgcattcagcatgagacgtgacagggataaccaaaacagaatacttgattat
atcaacacatttgcaggcctaaaaggaaatcttgcagtatattttccgtcatatgatatg
ctaaagacctttacagcaaacatacctaaaaagctgaaaggaaaggatgtattcatcgag
tcgcaggattctgcacaggcaacaagtgatctgaaagttttcatgtcacttccggaggta
aaccgttccggaataatttttggagtatgtggtgggaaatggagtgaaggtcttgattat
agaggtgagatgttaaacggcgctattgtaatcggccttccacttgcaccttttaatgat
gtaagaaaaatgattaatgattatttcaaaaacaaatttggaaaagaaggagaattttta
tcatatacactccctgctataaacaaggcaatacaggcgcttggaagggtattgagaact
cctgaggacagaggagttcttttgcttggcgaagagcgatttttggatgattctgtaaaa
aaagggcttcctccatggatgcaggatgaattaactgaatgtacaataaacgaatttaaa
tccggtatttccaaatggagatag
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