Methanomicrobium antiquum: L1994_06810
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Entry
L1994_06810 CDS
T08973
Name
(GenBank) CDC48 family AAA ATPase
Organism
manq
Methanomicrobium antiquum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
TIP49
AAA_5
AAA_22
AAA_2
AAA_33
CDC48_2
AAA_28
nSTAND3
RNA_helicase
AAA_14
IstB_IS21
Mg_chelatase
AAA_7
Parvo_NS1
AAA_18
AAA_24
NPHP3_N
Sigma54_activat
ATPase
DUF815
Sigma54_activ_2
AAA_17
Zeta_toxin
AAA_19
TsaE
SLFN-g3_helicase
NB-ARC
Cytidylate_kin2
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
WFN35872
UniProt:
A0AAF0FLM3
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Position
1375260..1377800
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AA seq
846 aa
AA seq
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MISLKVDSAYPEDQGGGRARLDPETMLQLHISPGDLVYIDGKNRTIAKVWRMMVNDWNQE
KLRIDNYTRMNAGVSIGDRVTISPVEGVIPAKSLILAPPEDMPKQLPINYNSAIARLIDF
PVMKNDSVPVVAGLPFMQPQTVSFKIVHIEPENSVIITRETEIEFSDKPAAGFEGLKTIS
YEDIGGLKGELQNVRETIELPMRHPELFRKLGIDPPKGVLLYGPPGTGKTLIAKAVANES
GAHFISIAGPEIISKYYGESEQRLREIFDEAEDNAPAIVFIDELDSIAPKREDVTGEVER
RVVAQLLTMMDGLEERGQVVVIGATNRLDAIDQALRRPGRFDREIEIGVPGEEDRLEILR
IHTRGMPIEGENLILDTRKKCETAQGEEKENLEKEFKILTDEVHKNRESMLEEFASKTNG
FVGADLAALAREAAMRALRRYLPDIDLDSDEIPQSVLESMEIKISDFKNALREISPSAMR
EVFLEVSHVKWSEVGGLTEEKEEVREAVEYPLTRRDKFENLGIEPPKGVLLYGPPGTGKT
LIAKAVANESGANFIPVRGPQLLSKWVGESEKAVREVFRKARQVAPSIIFFDELDALAPS
RGEGSESRVIESVLNQILTEFDGLEDLTGVVVMGATNRPDIIDPALLRAGRFDRLVYVGE
PDEKSRMNILQIHSKYTPIEGSLIDEIVDFIKNYDENSIDEAFNRLSMKKNISINRKITA
DEIKTCFAGTEPEKSQVLSGWQRRKILVAQFLKNGFYLEDPVRDNLLKKIAVKTSGYVGS
DLELLCRESAMFAMRENKSCVSESHFNMALEKVHPMMNDRLREQYTRIKQHFKGGLPPQV
QPVEYQ
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgataagtttaaaagttgacagtgcctatcccgaggatcaggggggaggaagggcaagg
cttgatccggaaactatgcttcagcttcatatctctccgggggatctggtatatattgac
ggcaaaaaccggacaatagccaaagtatggcgcatgatggttaatgactggaatcaggag
aaactcaggattgacaactatacccgcatgaatgccggagtaagcataggagacagggta
acaatctctcctgttgaaggggtcattccggcaaaaagtctcattcttgctcctccggag
gatatgccaaaacagctcccgataaattacaacagcgcaatagcacgccttattgacttt
cctgttatgaaaaatgacagtgtccctgtagttgccggacttccattcatgcagccacag
acagtctcatttaagattgttcatattgaacctgaaaattctgtaataataacacgtgag
actgaaattgaattttcagataaacctgccgcaggatttgaaggattaaaaacaatctca
tatgaggacattggcgggctaaaaggtgagcttcagaatgtcagagagactattgagctt
ccaatgagacacccggaattattcagaaaactgggtatcgatccgccaaaaggagttttg
ctttacggccctcctggaaccggaaagactctgattgcaaaagcggttgctaatgaaagt
ggagcgcatttcatatccattgcaggccctgaaataatctcaaaatattatggtgagagt
gaacagcgcctgagagaaatcttcgatgaagcagaagacaacgcgccggcaattgttttt
atcgatgaacttgattcaatagcacctaagcgtgaggatgtaacaggagaggttgaaaga
agagttgttgcccagcttcttacaatgatggacggccttgaagaaagaggtcaggtggtt
gtgataggcgctacaaacaggcttgatgcaatagatcaggctctaagaagaccagggaga
tttgacagggagattgagataggggtcccgggagaagaagacaggcttgaaattctaaga
attcatacaagaggaatgcctatcgaaggggagaatctgatacttgatacgagaaaaaaa
tgcgagactgcacaaggtgaagaaaaagagaatcttgaaaaggaatttaagatattaact
gacgaagtgcacaaaaaccgcgaatcaatgcttgaggaatttgcttcaaaaacaaatggt
tttgttggcgcagatcttgccgcattagcccgtgaagcggcaatgagagctttgagaagg
tatcttccggatatagatctggattctgatgaaatcccacaatctgttcttgaatcaatg
gaaataaagatcagtgattttaaaaacgctttaagggagataagtcccagtgcgatgaga
gaagttttcctcgaggtttctcatgtgaaatggtcagaagtgggaggacttactgaagaa
aaagaggaagtccgcgaagctgtggaatatcctcttacacgcagagataaatttgagaat
cttggaatcgaaccaccaaaaggagttttactttatggtcctccgggaacaggaaaaact
ctcatcgcaaaggctgttgcaaatgaaagcggtgctaatttcattcctgttcgcgggcca
caacttttgtccaaatgggtaggagaaagtgaaaaggcagttcgtgaggtattcagaaaa
gcacgtcaggtggcaccttcaattatattttttgatgaacttgatgcacttgcaccttca
agaggtgaaggcagtgaatccagagttattgaaagtgtgctaaatcagattcttacagag
tttgacggacttgaggatttgacaggcgttgttgtgatgggcgctacaaaccgtccggat
ataatcgaccctgcgcttttaagagcaggcagatttgacaggcttgtatacgttggtgaa
cctgatgagaagtcaagaatgaatattcttcagattcactcgaaatatacaccaatagaa
ggctctctcattgatgaaattgtagattttataaaaaattatgacgaaaattcaatagat
gaggcatttaaccgtctgagcatgaagaagaacatctcaattaacagaaaaatcacagcg
gatgagataaagacatgctttgctggcactgagcctgaaaaatcgcaggtattgtcagga
tggcagagaagaaaaattcttgttgcccaatttttaaagaacgggttttatcttgaagat
cctgtccgtgacaacctcttaaaaaagattgcagtgaaaacctcaggttatgtaggatca
gatcttgaacttttatgcagggagtcagcaatgtttgcaatgcgcgagaataaaagctgt
gtatcagagagtcatttcaacatggcgcttgaaaaggttcaccccatgatgaatgacagg
ttaagagaacagtacacaagaataaaacagcacttcaaaggcggtcttcccccacaggtc
cagcctgttgaatatcagtga
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