Methanomicrobium antiquum: L1994_07165
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Entry
L1994_07165 CDS
T08973
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
manq
Methanomicrobium antiquum
Brite
KEGG Orthology (KO) [BR:
manq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
manq03009
]
L1994_07165
Ribosome biogenesis [BR:
manq03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
L1994_07165
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
Fer4
Fer4_6
Fer4_21
Fer4_10
Fer4_7
RsgA_GTPase
Fer4_2
VapE-like_dom
AAA_23
Fer4_9
Fer4_4
Fer4_16
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WFN35936
UniProt:
A0AAF0JM01
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Position
complement(1445239..1447017)
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AA seq
592 aa
AA seq
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MRIAVVHKDRCHSKKCGRECIIYCPRVRTGDETIVIGENGKAIISEELCVGCGICIKKCP
FDAIDIITLPEELEYPTHRYGVNGFALYGMAAPVEGKVTGILGENGIGKSTAVSILSGQL
IPNLGNTDEKESSWDSVLEEYSGTELHDYLTKVSSGNVKVAVKPQYIDFIPKVFKGKVIS
LLKSTDERNVLDTYINELKLGPILDRDIDTISGGELQRVAIAACLCRKADFYFLDEITPY
LDIYQRMAAAKIIRDISQISPVMIVEHDLAILDMLADNVHVAYGKPSVFGIITRTKGVRV
GINQYLEGFLAEENVRFRDYSVTFETRAHRSDTDRETLFEFPAFKKSYGDSFRLNVKGGT
IKAGEVLGVVGANGIGKSTFAKLLAGVEVPDEGKLSSTVKIAFKPQYIKTDSTDTVEFML
RRTTSRFDTSYFLHEIIEPLSLEPILQSSVSQLSGGELQRVAIALCLAQDADLYILDEPS
AHLDVEQRVKLARVLRRHAESSGSGVLVIDHDIYVIDMISERLLVFDGTPGVSGEAVGPF
DMHEGMNYFLKELEITFRRDKSGRPRINKPGSYLDREQRSIGSYYYSDISKS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatagctgtagttcataaggacagatgccattcaaaaaagtgcggcagggaatgt
attatctactgtccgcgtgtgcgaaccggtgacgaaactatagttataggtgagaacgga
aaagccataatatctgaagagctttgtgtcggatgtggcatctgcataaaaaaatgcccc
tttgatgcaattgatataattactcttcctgaagagcttgaatatccgactcaccggtat
ggcgtaaatggttttgcactttatggtatggctgcacctgtcgaaggaaaagtaaccgga
attttgggagaaaatggtattggaaagagtacagctgtcagtattttatccggacagctg
attcccaatcttggaaatactgatgaaaaagagtcatcatgggattctgttttggaagag
tacagtggaacagagctccatgattatctgacaaaagtatcttccggcaatgtgaaagtt
gcagtaaaaccacagtatattgattttattccaaaagttttcaagggaaaggtaatcagt
cttcttaagtcaactgatgagagaaatgttcttgatacttacataaatgaactgaaactg
ggcccgattcttgacagggatatagacacaatatcaggaggagaacttcagcgtgttgcg
attgcggcatgcctgtgcagaaaagctgatttctatttccttgatgaaataacgccttac
cttgatatctatcagagaatggcagcggcgaagattatccgtgatatttcacagataagt
ccggttatgattgtcgaacacgatcttgctattcttgatatgcttgcagacaatgttcat
gttgcatatggaaagccgtctgtctttggcattattacaaggacaaagggtgtccgtgtc
ggaataaaccagtatcttgaaggatttttagcagaagagaatgtaagattcagggactat
tctgtaacttttgaaacaagggcacaccggtctgacactgacagagagacactgtttgaa
tttccggcatttaagaaaagctatggtgattcattccggcttaatgtcaagggcggaaca
ataaaagccggagaggttttgggtgttgttggtgcaaacggtattggaaaaagtactttt
gcaaaactccttgcaggcgtcgaagtgcctgacgaaggaaaactttcctcgactgtaaaa
attgctttcaaaccgcagtacataaagactgattctacagatactgtggaattcatgctt
cgaaggacaacaagccgttttgatacatcatatttcttacatgagataattgagcctctg
tcacttgaaccgattcttcagtcaagtgtaagtcagttgtctggtggagaacttcaaagg
gttgcaatagcactgtgtcttgcacaggatgccgacttgtatatacttgacgaaccaagt
gcccatcttgatgtagaacagcgtgtaaaacttgctcgtgttcttaggagacatgctgaa
agcagtggctcaggtgttttggtaattgatcatgatatttatgtgatcgatatgataagt
gaacgtcttttggtgtttgacggaacgcccggagtcagtggtgaagcagtcgggccgttt
gacatgcatgagggaatgaattatttcctaaaggagcttgagataacgtttagaagagat
aaaagtggaaggccaagaatcaataaaccagggagttatcttgacagggaacagcgttct
attggcagttattattattcagatattagcaaatcataa
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