Methanomicrobium antiquum: L1994_09120
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Entry
L1994_09120 CDS
T08973
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
manq
Methanomicrobium antiquum
Brite
KEGG Orthology (KO) [BR:
manq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
manq03016
]
L1994_09120
Enzymes [BR:
manq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L1994_09120
Transfer RNA biogenesis [BR:
manq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L1994_09120
Prokaryotic type
L1994_09120
BRITE hierarchy
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
SspP
Motif
Other DBs
NCBI-ProteinID:
WFN36297
UniProt:
A0AAF0JLN7
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Position
1852225..1853478
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AA seq
417 aa
AA seq
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MNHSITDPELKKLLDCGIIAIDKPQGPSSHQVTAWVKEILGGDIKIGHGGTLDPMVSGVL
IIMLGRAVRLAPVILKHRKEYIAVLRLHDDVSKEDVLRAADEFTGRIYQRPPRKSAVRRQ
LRIRRIYEIEILDFKERLVLMRVACEAGTYVRSLCTHMALSMGVGGQMEELRRSRSGSVV
LSDTCTLHDLKDAAVFASEGDTEELKKMILPVERLISEIPIVKILDSAVEAVCSGALLAG
VGVSARESYKRDARVAVITEKGELVCIGKALVSSEEYKLGDTGLVVAPQAVVMKRGTYEK
GWVSKNSKKSKNSKKSYDERSNSPLIDSKLTHNETSEPIDTSKKIKDRNISSGRESNRRN
KQDNRPFKRITRAEKQRADTKSAEKKRTGKISKTKTIPDNAVPKVRSGFQPYKKNKK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattcaataacagacccggaattaaaaaaactccttgactgcggaataatcgca
atagataaaccgcaggggccgtcaagccaccaggtaactgcatgggtaaaggagatttta
ggcggcgatatcaaaatcggacatggaggaacacttgatccgatggtttcaggcgttctt
ataataatgcttggaagagcagtccgccttgcaccagttatactaaaacacagaaaagag
tacatcgctgttttaagacttcacgatgatgtttcaaaagaagatgttttaagagcggca
gatgaatttacaggcagaatctatcaaagaccacccagaaaaagtgctgttcgccgtcag
ctcagaatcagaagaatttatgagattgagattcttgattttaaagaacgtcttgtttta
atgcgggtggcctgcgaagccggaacatatgttcgttctctttgtacccatatggcttta
tcaatgggtgtcggcgggcagatggaggagcttcgccgttcaaggtcaggttcagtcgtc
ctttctgacacctgcacgctccatgacttaaaagacgccgctgttttcgcatccgaagga
gatactgaagagttaaaaaagatgattcttcctgttgaaagattaatttcagagattccg
attgtaaaaatacttgattctgctgtagaggcagtctgttccggtgctttgcttgccggt
gttggtgtttctgcacgtgagagctataaacgggatgcaagagttgcggttataacagaa
aaaggagaacttgtctgcataggaaaagcccttgtttcctcagaggagtacaagctcggc
gatacaggccttgttgtcgcacctcaggcagtcgtcatgaaaagaggaacatatgagaag
ggctgggtttccaaaaattcaaaaaaatccaaaaattccaaaaaatcatacgatgaaaga
tcaaatagcccattaatagattcaaaactgacacataatgagaccagcgaaccaatagat
acttcaaaaaagattaaagaccggaatatctcttcaggaagggaatctaatcgcaggaat
aaacaggataacagaccttttaaaagaattacgagagcagaaaaacaacgggctgataca
aagtctgccgaaaaaaagagaaccggaaaaatttcgaaaaccaaaactatccctgataat
gctgtaccaaaagtccgctcagggtttcagccatataaaaagaataaaaaataa
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