Methanomicrobium antiquum: L1994_09270
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Entry
L1994_09270 CDS
T08973
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
manq
Methanomicrobium antiquum
Pathway
manq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1994_09270 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manq03019
]
L1994_09270 (recQ)
03400 DNA repair and recombination proteins [BR:
manq03400
]
L1994_09270 (recQ)
Enzymes [BR:
manq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1994_09270 (recQ)
Messenger RNA biogenesis [BR:
manq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1994_09270 (recQ)
DNA repair and recombination proteins [BR:
manq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L1994_09270 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
HTH_7
GerE
Motif
Other DBs
NCBI-ProteinID:
WFN36324
UniProt:
A0AAF0JL71
LinkDB
All DBs
Position
complement(1884742..1886967)
Genome browser
AA seq
741 aa
AA seq
DB search
MHEVSDTIPAGSLSAESALSKYFGYNSLYPYQKEIIDSVTNGRDVLAVIATGGGKSICYQ
LPALLMDGIAVVVSPLISLMKDQVDSLVTAGVSAGFLNSTQDYSDYTKTVGAMVSGSLDI
VYVSPERAVTPSFISTLKRCRISLLAVDEAHCISQWGHEFRPEYRRLASLKKEFPQIPVI
ALTATATPVVRTDIIKQLNLKDPLFYVGSFYRKNLKYTVIPKKDAFGQIVSYIKKRRSDD
SGIIYCQSRKGVEDISKKLGSAGIYALPYHAGLSKQVREKTQDKFIKDNVPVIVATVAFG
MGINKPDVRYVIHYDLPDSPENYYQETGRAGRDGLLSDCLLFYSRGDRAKVEYFINRMNA
GRQKTSALKKLDAITDFCESTECRVKMFLDYFGEDTTGFACGRCDNCLNPSEPFDGTDIA
KKIIRCIQSLEVSFGIGYIADVLRGSKSKKIKEKGHEKSPYFGTGKTFSKDELESYIKEI
MRGGFLSREGSRYPVVVLNEKSMDVLSGKVRVTLIRFKDKKSKEKRSKKSVSKTSPQELS
DGRMRDCDNFLYERLKTVRKRIADEKKIPPYMVLSIASLAELASKRPKTKTGLLSIKGIG
DHKAGEFGKLFLDEISSFESEKSNAGLYASSGNESKTSVREKSSDATYRMYAKGMTISQI
AKERELTEETIAVHIEEKIREGAEIDLDDLVSEKNQEAVFSSLKNYGDISIKDIKSLTDG
RISVSEIRFVKAFFERNQNKI
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaggtttcagacacaataccggcaggcagtctttctgctgaatcagcgctttca
aaatattttggctacaattctttgtatccctatcaaaaagagataattgattctgtgaca
aacgggcgtgacgtactggcagtcatagcaacaggaggtggaaaatcaatatgttatcag
cttccggcacttttgatggacggaatcgcagtcgttgtatcacctcttatttcgcttatg
aaagatcaggttgactcactggtaacagccggtgtttccgcaggatttttaaacagtact
caggattattcagattatacaaagactgttggtgcaatggtcagtggcagtctggatatt
gtttatgtatcgcctgaaagagctgttacaccttcttttatatcaactctgaaacgttgc
agaatctcacttctggcagtcgatgaggctcactgcatctcacagtggggtcatgaattc
aggcctgaatacaggcggcttgcatcactaaaaaaagaatttccacaaatacctgtaatt
gctctgactgcaacggcaacaccggttgtgagaactgatattataaaacagctaaatctt
aaagatccgctattttatgttggtagtttttacaggaaaaatttaaaatatactgttatt
ccaaaaaaggatgcttttggtcagattgtttcatatatcaaaaaaagacgttctgacgat
tccggaattatttactgtcagagtagaaaaggtgttgaggatatctcaaaaaagttaggt
tctgccggaatctacgcacttccctatcatgcagggctttccaagcaggtccgtgaaaaa
actcaggacaaattcataaaggacaacgtgcctgtaattgttgcaacggttgcattcgga
atgggaataaacaagcctgatgtcaggtatgtgattcattatgatcttcctgacagtcct
gaaaattattatcaggagacgggaagagcaggacgtgacggtcttttatctgactgcctt
ttgttttattccagaggtgacagggcaaaggttgaatattttatcaaccggatgaacgcc
ggcaggcaaaagacttcagctcttaaaaagcttgatgctataactgatttttgcgagagc
acagagtgtcgcgttaagatgtttcttgattatttcggcgaggacacaactggatttgcc
tgcggaagatgcgacaactgtttaaatccttcagagccatttgacggaacagatattgcg
aaaaagataatcaggtgtattcagtctcttgaggtctcctttggaataggatacattgct
gatgttctaagaggatctaagagcaaaaagataaaagagaagggccatgaaaaatcacca
tattttggcacaggaaagacattttcaaaggatgaactggagtcctacattaaagagata
atgagaggcggctttttgtcgcgtgagggaagccgctatcctgtagttgtattaaatgaa
aaaagcatggatgttctttcaggaaaagtccgtgtcacacttatacgttttaaggataaa
aaatcaaaagaaaaaagatctaaaaagagtgttagtaaaacctccccacaggaattatct
gatggcaggatgcgtgattgtgacaatttcctctatgagaggcttaaaacagtcagaaag
agaattgcggatgagaagaaaattccgccttacatggttttatcaattgcatctttagct
gaacttgcatctaagcggccgaaaacaaagaccggtcttttaagcataaagggaatcgga
gatcacaaagcaggagaatttggaaagctctttttggatgaaatatcatcgtttgagagt
gaaaaatcaaatgcaggcctttatgcatcttccggtaatgaaagcaaaacttcagttcgg
gaaaagagcagtgatgcaacctaccggatgtatgcaaaaggaatgacaataagtcagatt
gcaaaagaaagggagcttactgaagagactattgcggttcacattgaagaaaaaattaga
gagggtgcagaaatagatttggatgatttggtctctgaaaaaaatcaggaagctgtcttt
tcttctcttaaaaattatggagatatatcgataaaggatataaaaagcctgacagacgga
aggatatctgtcagtgaaataaggtttgtgaaggctttttttgagagaaatcagaataaa
atctga
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