Mariniplasma anaerobium: MPAN_012220
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Entry
MPAN_012220 CDS
T07723
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
manr
Mariniplasma anaerobium
Pathway
manr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPAN_012220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manr03019
]
MPAN_012220
03009 Ribosome biogenesis [BR:
manr03009
]
MPAN_012220
Messenger RNA biogenesis [BR:
manr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MPAN_012220
Ribosome biogenesis [BR:
manr03009
]
Prokaryotic type
rRNA helicases
MPAN_012220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
RMI1_N_C
CoV_nucleocap
UBA_3
Motif
Other DBs
NCBI-ProteinID:
BCR36329
UniProt:
A0A7U9XW65
LinkDB
All DBs
Position
complement(1298488..1300191)
Genome browser
AA seq
567 aa
AA seq
DB search
MNILFKDLPIKEETKQAIEALGLVETTDIQHHAIPLMLEKKDLIGQAQTGTGKTFAFAIP
MIEHIDLDNKNIQGLVICPTRELTLQVYKEFLKLVKFNKQIKITSIYGGESYQKQFKALK
EHPQIVVATPGRAIDHLHRGTIDLSSLDMLIMDEADEMLKMGFQEDLETLLKDTPQERQT
ALFSATIPAFIKEVAKKYQKTPEIIKIKTKSLTVDKIDQFYYMIKKTDRDQLLLRALDFY
NPSSAIIFANTKRDVDHLAAFLQKYSYEADALHGDLKQSQRDYVMNRFRSRRLTLLIATD
VAARGLDVSHVDMVFNYELPFEDEIYVHRIGRTARAGLSGKSVSFVYPSMRGKLFMIEKF
IKQQMVELEIPTLIEIQAKQEETLFEQIKHETDSNETNYDMLIAKFVELGYDKDDIISAL
IKKLSVQIKTYEDISKPRTRQDNNFSKDQSRSGSRNRSRSGSRDQSRSGSRDSSRSGSRD
QSNRRDDNSKQYFTATINLGKNDGLRAPHLLDYFKKNADMYPSNIGDINISDDHTDFEIH
VKAVKRLDQLTDKVFKGRKLKFKITKK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaatatattatttaaagatttaccgattaaagaagaaacaaaacaagctatagaagct
ttaggtttggttgaaacaacagacattcaacatcatgcaattccattgatgttagagaaa
aaagatctcattggtcaagcacaaacaggaacagggaaaacatttgcttttgctattcct
atgattgaacatatcgatcttgacaataaaaacatacaaggacttgtcatttgtccaact
agagaattaactttacaagtttacaaagaatttttaaaacttgttaaatttaataaacaa
attaaaattacatccatatatggtggagaatcatatcaaaaacaatttaaagcacttaaa
gaacatccacaaatcgttgtagcaactcctggtagagcaattgatcatttacatcgtgga
actattgacttatcgagtttagatatgttaattatggatgaagcagatgaaatgcttaag
atgggctttcaagaagacttagaaacacttttaaaagacacaccacaagaaagacaaaca
gcattattttcagcaactattccagcatttattaaagaagttgcaaaaaaatatcaaaaa
actccagaaattataaagattaaaacaaaatcacttactgttgataaaattgatcaattt
tattacatgattaaaaaaacagatcgcgatcaacttttattaagagctctagatttttat
aatccttcatcagcaattatatttgcaaacacaaaaagagatgttgatcatcttgcagcg
tttttgcaaaaatattcatatgaagcagatgcacttcatggagatttaaaacaatctcaa
agagattatgttatgaatcgctttagatcaagaagacttacattattaattgcaacagat
gttgcagcacgtgggcttgatgtatcacatgttgatatggtatttaattatgaattacca
tttgaagatgaaatatatgtacatagaattggtagaactgctcgtgcaggattatcaggt
aaatctgtatcatttgtttatccttcaatgagaggcaaattattcatgattgaaaaattt
atcaagcaacaaatggtagaattagaaatacctacactaatagaaattcaagcaaaacaa
gaagaaactttatttgaacaaatcaaacatgaaacagattcaaacgaaaccaattacgat
atgctaattgctaagtttgtagaacttggttacgataaagatgatatcatttctgcctta
attaagaaactatcagttcaaataaaaacttatgaagatatatctaaacctagaactaga
caagataataatttttcaaaagatcaatcaagaagtggttcaagaaatagatcaagaagt
ggctcaagagatcaatcaagaagtggctcaagagattcatcaagaagtggatctagagat
caatcaaatagaagagatgacaattcaaaacaatactttacagctactatcaatcttggt
aaaaatgatggattaagagcgcctcatttattagactatttcaagaaaaacgctgatatg
tatcctagtaacattggtgatatcaatatcagtgatgatcatacagactttgaaattcac
gtgaaagctgtgaaaaggctagaccaacttacagataaagtatttaaaggtcgtaaatta
aagtttaaaattacaaaaaaataa
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