Mariniplasma anaerobium: MPAN_015560
Help
Entry
MPAN_015560 CDS
T07723
Name
(GenBank) DEAD/DEAH box family ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
manr
Mariniplasma anaerobium
Pathway
manr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPAN_015560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manr03019
]
MPAN_015560
Enzymes [BR:
manr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MPAN_015560
Messenger RNA biogenesis [BR:
manr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MPAN_015560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Cas3-like_C_2
P-loop_SecA
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BCR36663
UniProt:
A0A7U9THN2
LinkDB
All DBs
Position
complement(1646765..1648105)
Genome browser
AA seq
446 aa
AA seq
DB search
MSFKNLGIIPEILKAVEHEGYDTPSPIQEQAIPVLLQQKDVLASAQTGTGKTAAFSIPII
QGLYQDQLPYEKKHIRALILAPTRELAEQIKDSFRGYSRHMGLRTEVIYGGVSQRSQEIA
LKKGVDILVATPGRLLDLINQGLVKLQFVKYLVLDEADHMLDMGFIKDVRKIVSYVKDMH
QTMMFSATLPHEILSFANELLINPVRIEITPPEAMLDKIDHSLYFVTKKDKTNLLIDLLV
NPKMESVLVFTRTKHGANKLVKELLAYGVKADAIHGNKSQNMRQKALNNFKAKRTRVLVA
TDIAARGIDVDDLSHVLNYDLPESPETYVHRIGRTGRAEKTGIAMSFCSQDEAHLLRAIE
KTNKITIPVITEQPFHTTIRVDQTRNELKVIKAQRENGSKRGNTGRRKKSYSPDTNKNKN
ESPYQKAKSKKKYYDKYSKSKSSRKY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaaaatttaggaattatcccggaaatattgaaagcagtagagcatgaaggc
tatgatacaccttcacctatacaagaacaagccatccctgtacttttacaacaaaaagat
gtactagcaagtgcacaaacaggaacaggtaaaacagcggctttttcaataccaattatt
caagggttgtatcaagatcaattaccatatgagaaaaaacatattagagctttaattcta
gcaccaacaagagaacttgctgaacaaattaaagatagttttagaggttactctcgtcac
atgggattaagaacagaagttatttatggtggcgtatcacaaagaagccaagaaatagca
ttaaaaaaaggtgttgacatattagttgcgacaccaggtagattattagatttaattaac
caagggttagttaaattacaatttgttaaatatctagttttagatgaagcagatcatatg
ttagatatgggctttatcaaagacgttagaaaaatagtttcatatgttaaagatatgcat
caaacaatgatgttttcagcaacattacctcatgaaatattatcttttgcaaatgaatta
ttaatcaatccagtaagaattgaaatcacaccaccagaagcaatgttagacaaaatcgat
catagcttatattttgttacgaaaaaagataaaacaaatctattgattgacttactagtt
aatcctaagatggaatctgttttagtttttacaagaactaaacatggtgcaaacaagtta
gttaaagaattactagcttatggtgttaaggctgatgcgattcatggtaacaaatcacaa
aacatgagacaaaaagcattaaataactttaaagctaaacgcacaagagtattagttgca
actgatattgcagctcgtggaattgatgtagatgatttatcacatgtattaaattatgac
ctaccagaatctccagaaacttacgtgcatagaattggtagaactggtagagcagaaaaa
actggtattgcaatgtcattttgttcccaagatgaagcacatttattaagagctattgaa
aaaacaaataaaataacaatacctgtcatcactgaacaaccatttcatacaaccattaga
gttgaccaaacaagaaatgaattaaaggttatcaaagctcaaagagaaaatggttcaaaa
agaggtaatacaggcagaagaaaaaaatcttactcacctgatacaaataagaataagaat
gaatccccttatcaaaaagctaaatcaaaaaagaaatattatgataaatattcaaaatct
aaatcatcaagaaaatattaa
DBGET
integrated database retrieval system
