Mycoplasma anserisalpingitidis: FRW55_00785
Help
Entry
FRW55_00785 CDS
T06570
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mans
Mycoplasma anserisalpingitidis
Pathway
mans03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mans00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FRW55_00785 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mans03021
]
FRW55_00785 (rpoC)
03400 DNA repair and recombination proteins [BR:
mans03400
]
FRW55_00785 (rpoC)
Enzymes [BR:
mans01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FRW55_00785 (rpoC)
Transcription machinery [BR:
mans03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FRW55_00785 (rpoC)
DNA repair and recombination proteins [BR:
mans03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FRW55_00785 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QDY86703
UniProt:
A0A5B8JBS9
LinkDB
All DBs
Position
174095..178522
Genome browser
AA seq
1475 aa
AA seq
DB search
MNNFEESKKIEKIILSLATDEDVLEWSNGEVTKPETINYKSYKPERDGLFDELIFGPTTD
YKCPICNTKYKRSDENSVCSKTTACEKYKPKILPKITRRSRMGHIHLHNPVVHFWFFKID
HSIISKLLGLKVSDTNKVVTKADLEKLIYYKSHIVLEDGGLKALKKNTIIDINEAASIYE
SVLHEMLDMYSKDSEEYEDIALALSELRQYAASQMGKDYGIDFYEYNDIIHEYSNAKIGT
GSQAIEYLLTHIDLEEEARKVAEEIELINNSIPAGESLTGTKVQERTKLYKRLTIINSFI
KSGQKLTSMLIYNLPVIPADLRPLVQLDGGRHSTSDINELYRRIIIRNNRLEKWNASDAP
MLIKQNEYRMIQEAVDALIDNARKKPSPVVSKDSRPLKSISDAITGKKGRFRQNLLGKRV
DYSGRSVIVVGPTLKMHQVGIPREMAAKLFEPWVIKEIIKSNEGINSIKAAKKKVESLDP
MIWPYVERAIEGRPVLLNRAPTLHRLSIQAFEPVLIRGKAIRLHPLVTTAFNADFDGDQM
AVHVPISDEAVREARELMLASKNILGPKDGEPIINPSQDIILGLYYLTLEKENAKGEGTY
YSSMNDMLNAYERGYITLHTRVVLPIKEVNKDQLQLDPNKKYVISTPGKFILNNAFPSDF
EFIFGKRVTKKVTTSSNGEVKVSESEKIHTSLNNVDEYTLPYEVNFTEYIKNLPTNTALS
KKDIAKIVRKVYKKYVAIVTMEDIASVINEVNRENYKDLFTKCAELYDYKNEPINQVHAN
TIAKLIKKHFAEIDAITTRKNKGQLKEWTVSNYTELLEKVWFDYTNKVAKILDKIKDLGF
FYSTKSGTTISMNDVTTVPSTKEKIKDGEIYANQLKEYFEKGYLTDDERYTLTIQKWSEV
KESIEADLKVVTKSDMSNPLFTMFLSGARGNISNFVQLAGMRGLMSNNTKVLKADAANER
VVRSTIEIPVKSSFLDGLTGYEFFSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQGIVV
REDDCGSDFGFIVKDIKDTKTDTVIESLAERIEGRFTNRPIYDENGELVVAANTLITPEL
AERIINDAKVTEVEIRSVLSCHTRNGVCKKCFGKDMATNRIVNIGEAVGVVAAQSIGEPG
TQLTMRTFHTGGVAGVEDITGGFGRLIELIDAYDSPWGRPAVISKHNGIVTGISIAKDKD
GRDTDALLITVAHRNGHETTKETYNAKVSQKLRVAVGDSVIPGQKLVEGPIVLTELLETV
DTRAVQNYLLKEVQRLYRLQGISISDKYIEIIIRQMLSKVMITDPGDSSFFTGSLIDTFV
YQRENGRLIAQGKKPAYGEVKIRGAKQTPLLSESFLAAASYQETAKILVNSSISQRVDNL
EGLKENIILGHKIPAGTNINYEAKGKYDIRDPRSYFKGKYDPTNEDFNDVNIDEDFEDFE
NFSPYDSSENDEYTISLDEIYDNNSDDENEYNDDY
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgaataattttgaagaatctaaaaaaattgaaaaaatcattcttagtcttgcaacagac
gaagatgttttagaatgatcaaatggtgaagttactaaacctgaaacaattaactataaa
tcttataaaccagaaagagatggtctttttgacgaattaattttcggtcctacaactgac
tataaatgtccaatttgtaatactaaatacaaaagaagtgatgaaaatagtgtttgttca
aaaactactgcatgtgaaaaatacaaaccaaaaattcttccaaaaattacacgtagaagt
agaatgggacacatccacttacacaatccagttgtacacttttgattctttaaaattgat
cactcaatcatttctaaattattaggactcaaagtaagtgatacaaataaagttgttact
aaagcagatttagaaaaacttatttactataaatcacacatcgttcttgaagacggtgga
cttaaagcacttaagaaaaatacaattatcgacatcaatgaggctgcaagtatttatgaa
tctgttcttcatgaaatgcttgatatgtattcaaaagattctgaagagtatgaagatatc
gctcttgcattaagcgaattacgtcaatatgctgcttcacaaatgggtaaagattatggt
attgacttctacgaatacaatgatattattcatgaatattctaatgctaaaatcggtaca
ggttctcaagctattgaatatcttttaactcacattgacttagaagaagaagctagaaaa
gtagctgaagaaattgaattaattaacaacagcattccagctggtgaaagtttaactgga
accaaagttcaagaaagaactaagttatataaaagacttacaattatcaattcattcatc
aaatcaggtcaaaaattaacaagtatgttaatttataacttaccagttattcctgctgat
ttacgtcctcttgttcaacttgatggtggacgtcattcgacaagtgatattaatgaactt
taccgtcgtattattattagaaataatcgtttagaaaaatgaaatgcttctgatgctcct
atgttaattaaacaaaatgagtatcgtatgattcaagaagctgttgatgctttaattgac
aacgctagaaaaaaacctagtcctgttgtttctaaagattcaagacctcttaaatctatt
agtgatgccattacaggtaaaaaaggtcgtttccgtcaaaacttacttggaaaacgtgtt
gactactcaggacgtagtgttattgtcgttggtcctactcttaaaatgcaccaagttggt
attcctagagaaatggctgctaaattatttgaaccatgagtaattaaagaaataataaaa
tctaatgaaggaattaactcaattaaagctgctaaaaagaaagttgaatcacttgatcca
atgatttgaccatatgttgaaagagctattgaaggtagaccagttcttcttaaccgtgct
cctacacttcaccgtctttcaattcaagcttttgaaccagttttaattagaggaaaggct
ataagattacacccacttgtaactacagctttcaacgccgacttcgacggggaccaaatg
gctgttcacgttcctatttctgatgaagctgttcgtgaagctcgtgaattaatgcttgct
tctaaaaacattcttggtcctaaagatggtgaacctatcatcaacccatctcaagatatt
attcttggattatattacttaacactagaaaaagaaaacgctaaaggtgaaggtacatat
tattcatcaatgaatgatatgttaaatgcctatgagcgtggctatattactcttcacaca
agagttgttttaccaatcaaagaagtcaataaagatcaattacaacttgatcctaataag
aaatatgtaatttctacacctggtaaatttattcttaacaatgctttcccatcggatttt
gaatttatttttggtaaaagagtaactaaaaaagttacaacaagttctaatggtgaagta
aaagtatctgaaagtgaaaaaattcacacaagcttaaataatgttgatgaatatacttta
ccttatgaggtgaattttactgaatacatcaaaaacttaccaactaatactgctttatct
aaaaaagatattgcaaaaattgtgcgtaaagtatataaaaaatatgttgctattgtaaca
atggaagatattgcaagcgttattaatgaagtaaatagagaaaattacaaagatttattt
actaaatgtgctgaattatatgactataaaaatgaaccaattaatcaagttcatgcaaat
acaattgctaagttaattaaaaaacattttgcagaaattgatgctattacaactagaaaa
aataaaggtcaacttaaagagtgaacggtaagtaattacacagaattacttgaaaaagtt
tgatttgattacacgaataaagtggcaaaaattcttgataaaatcaaagatttaggtttc
ttctattcaactaaatctggtacaacaatctcaatgaatgacgttacaacagttccatca
acaaaagaaaaaattaaagatggtgaaatttatgccaaccaacttaaagagtattttgaa
aaaggatacttaactgatgatgaacgttatactttaacaattcaaaaatgatctgaagtt
aaagaaagtattgaagcagacttaaaggttgttactaaatcagatatgagcaacccactt
ttcacaatgttcctttctggagctcgtggaaatatctctaactttgttcaacttgctggt
atgcgtggacttatgagtaacaacaccaaagttcttaaagccgatgctgcaaacgaacgt
gtggttcgtagtactattgaaattcctgttaagtcaagtttccttgatggtcttactggt
tatgagttcttctcatcaactcacggggctcgtaaaggacttactgatactgctcttaac
actgctaaatctggatatttaactcgtcgtttagttgatgttgctcaaggtattgttgtt
agagaagatgattgtggttcagactttggttttattgttaaagacattaaagacacaaaa
actgatactgtaattgaatctcttgcagagagaattgaaggtagatttactaaccgtcca
atttacgatgaaaatggtgaattagttgttgctgcaaatactttaattactccagaatta
gctgaaagaattatcaatgatgctaaagttactgaagttgaaattcgttctgtactttct
tgtcatacacgtaatggggtatgtaaaaaatgttttggtaaagatatggccacaaacaga
atagtaaatatcggagaagctgttggagttgttgctgctcaaagtattggtgaacctggt
acacagcttactatgcgtacattccataccggaggggttgctggggttgaagatattact
ggtggatttggtcgtttaatcgaattaattgatgcctacgattcaccttgaggtagacca
gctgttatttcaaaacataatggaattgtaactggaattagtattgcaaaagataaagat
ggtagagatactgatgcattattaattactgttgcacacagaaatggacatgaaacaaca
aaagaaacatataatgctaaagtttcacaaaaacttagagttgctgttggagatagtgtt
attccaggtcaaaaacttgttgaaggtccaattgttttaacagaattacttgaaactgtt
gacactagagctgttcaaaactacttacttaaagaagttcaaagactttatagacttcaa
ggtatttctatttcagataagtatatcgaaatcattattcgtcaaatgctttctaaagtt
atgatcactgacccaggagattcaagcttctttaccggtagtttaattgatacatttgta
tatcaaagagaaaatggtcgtttaattgctcaaggtaaaaaaccagcttatggtgaagtt
aaaatccgtggagcaaaacaaactcctcttcttagcgaatctttcttagctgctgcatca
taccaagaaacagccaaaatcttagttaactcatcaatttcacaaagagttgataactta
gaaggtcttaaggaaaatattattcttggacataaaattcctgcgggtacaaatattaat
tatgaagctaaaggaaaatatgatatccgtgatcctagatcatactttaaaggaaaatat
gatcctactaacgaagactttaatgatgttaacatcgatgaagattttgaagattttgaa
aactttagtccatacgattcatcagaaaatgatgaatatacaatttcactcgatgaaatt
tatgacaataattctgatgatgaaaatgaatacaatgatgattattaa
DBGET
integrated database retrieval system
