KEGG   Marisediminicola antarctica: BHD05_02125
Entry
BHD05_02125       CDS       T06401                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
mant  Marisediminicola antarctica
Brite
KEGG Orthology (KO) [BR:mant00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mant03032]
    BHD05_02125
   03036 Chromosome and associated proteins [BR:mant03036]
    BHD05_02125
   03400 DNA repair and recombination proteins [BR:mant03400]
    BHD05_02125
DNA replication proteins [BR:mant03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BHD05_02125
Chromosome and associated proteins [BR:mant03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BHD05_02125
DNA repair and recombination proteins [BR:mant03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BHD05_02125
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267 PSF3_N
Other DBs
NCBI-ProteinID: QHO68604
UniProt: A0A7L5AGU8
LinkDB
Position
452670..452957
AA seq 95 aa
MADKSLNRTELVAAVAAESGQSQAAVNGVLDALFSTLATSVGEGTKVTIPGWLAIERTHR
AARAGRNPSTGEAIQIAAGYGVKVSAGSKLKAAAK
NT seq 288 nt   +upstreamnt  +downstreamnt
atggctgacaagtcactgaaccgcaccgagctcgtcgcagcagtagccgcagagtctggc
cagagccaggccgcagtgaacggcgtgctcgacgcactgttctcgaccctcgcgacctcg
gtcggcgaaggcaccaaggtcacgatcccgggatggctcgccattgagcgcacccaccgt
gccgctcgcgccggacgcaacccgtccacgggtgaggccatccagatcgccgccggatac
ggtgtcaaggtcagcgccggcagcaagctcaaggccgccgcgaagtaa

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