| Entry |
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| Name |
(GenBank) ATP-dependent DNA helicase RecQ
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| KO |
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| Organism |
mant Marisediminicola antarctica
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mant00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHD05_03380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mant03019]
BHD05_03380
03400 DNA repair and recombination proteins [BR:mant03400]
BHD05_03380
Enzymes [BR:mant01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BHD05_03380
Messenger RNA biogenesis [BR:mant03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BHD05_03380
DNA repair and recombination proteins [BR:mant03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BHD05_03380
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
720560..722407
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| AA seq |
615 aa
MSSTPDAPARPLARSAPAEVLHRVFGYDEFRGNQAEIIDHVSSGGDALVLMPTGGGKSLC
YQIPALVRRGTGIVISPLIALMQDQVDALSAVGVRAAYLNSTQTPDAKAAVERAYLAGEL
DLLYLAPERLRVQSTAALLDRGEMALFAIDEAHCVSQWGHDFRPDYLQLSVLHERWPTVP
RIALTATATEQTHAEIAQRLQLGEAKHFVASFDRPNIQYRIASKNSPQQQLLQLVRSEHD
GDAGIVYCLSRASVEKTAQMLVDNGIPALPYHAGLPAPVRAANQSRFLREDGIIMVATIA
FGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRRMIADS
EGDNAHRRKLSAHLDAMLALCETVECRRVQLLAYFGETSTACGNCDTCLSPPESIDGTIA
AQKLLSTVVRLQRERNQKFGAGQLIDILLGKRTPRVEQNGHDNLSTFGIGGELSEPEWRG
VVRQLLAQGLLQVNSDGFGTLVITDDSAAVLSGARKVSLRREPDRPAKKASRTARGASAE
LPAGATPLFEKLRAWRAAEAKEQGVPAYVIFHDATLREIATGTPGTLAELGTVSGVGESK
LEKYGQKLLDAISAA |
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| NT seq |
1848 nt +upstreamnt +downstreamnt
atgagttcgacaccggatgcgcccgcccgccccctcgcgcgcagcgcaccggccgaggtg
ctgcaccgcgtcttcggctacgacgaattccgcggaaaccaggccgagatcatcgaccac
gtgtcatccggcggcgacgcactcgtcctgatgcccaccggcggcggcaagtccctctgc
taccagatcccggcgcttgtgcgccgcggaaccggcatcgtcatttccccgctcatcgcc
ctcatgcaggaccaggtcgacgcactctccgccgtcggggtgcgcgcggcctacctgaac
tccacccagaccccggatgccaaggcggccgtcgagcgcgcctatctcgcgggcgagctc
gacctgctctatctcgcgccggagcggctacgggtgcagtcgaccgctgccctgctcgac
cggggcgagatggctctgttcgcgatcgacgaggcgcactgcgtgtcgcaatggggccac
gacttccgccccgactacctgcagctgtcggtgctgcacgagcgctggccgacagtgccg
cgcatcgcgctcaccgcgaccgcgaccgagcagacccacgccgagatcgcccagcgcctg
cagctcggcgaggcgaagcacttcgtggccagcttcgaccgtccgaacatccagtaccgg
atcgcctcgaagaactcgccccagcagcagctgctccagctcgtgcgtagcgagcacgac
ggcgacgcgggcatcgtctactgcctctcgcgggcatccgtcgagaagaccgcgcagatg
ctggtcgacaacggaatccccgctctgccgtaccacgcgggcctcccggcaccggtccgg
gccgccaaccagtcgcggttcctgcgcgaagacggcatcatcatggtcgcgacgatcgcg
ttcgggatgggcatcgacaagccggatgtgcggttcgtcgcccacctcgacctgcccaag
agcgtcgagggctactaccaggagaccggacgcgcgggccgcgacgggctgccgtcgacc
gcgtggcttgcctacgggctgcaggacgtcgtgcaacagcgccggatgatcgccgactcg
gagggcgacaatgctcaccgacgcaagctctccgcgcacctcgacgcgatgctcgcgctg
tgcgagacagtcgaatgccgccgggtgcagctgctcgcctacttcggcgagacgtcgacc
gcgtgcggcaactgcgacacctgcctgtcgccgcccgagtcgatcgacggcaccatcgcc
gcccagaagctgctgtcgacggtcgtgcgactgcagcgcgagcgcaaccagaagttcggc
gcgggtcagctcatcgacatcctgctcggcaagcgcacgccgcgcgtggaacagaacggc
cacgacaacctgagcaccttcggaatcggcggcgagctgagcgagcccgagtggcgcggt
gtcgtgcggcagctgctcgcgcagggactactccaggtcaacagcgacggcttcggcaca
ctcgtgatcaccgacgacagcgccgcggtgctctccggggcacgcaaggtctcgctgcgc
cgcgagcccgatcgcccggcgaagaaggcgtcgcgcacggcgcgcggggcatccgccgag
ctccccgcgggagccaccccgctgttcgagaagttgcgggcctggcgtgccgccgaggca
aaggagcagggcgttccggcgtatgtgatcttccacgatgcgacccttcgcgaaatcgcg
acaggcacccccggcaccctcgccgagctgggcacggtgtcgggcgtcggcgagtcgaag
ctcgagaagtacgggcagaagctcctcgacgcgatcagcgcggcctga |
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