Marisediminicola antarctica: BHD05_04520
Help
Entry
BHD05_04520 CDS
T06401
Name
(GenBank) type II secretion system protein GspE
KO
K02652
type IV pilus assembly protein PilB
Organism
mant
Marisediminicola antarctica
Brite
KEGG Orthology (KO) [BR:
mant00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mant02044
]
BHD05_04520
02035 Bacterial motility proteins [BR:
mant02035
]
BHD05_04520
Secretion system [BR:
mant02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
BHD05_04520
Bacterial motility proteins [BR:
mant02035
]
Pilus system
Pilus assembly proteins
BHD05_04520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_16
AAA_22
AAA_29
nSTAND3
AAA_14
AAA_30
SRP54
AAA_23
cobW
AAA_7
DAP3
Motif
Other DBs
NCBI-ProteinID:
QHO69017
UniProt:
A0A7L5AFP0
LinkDB
All DBs
Position
959217..960902
Genome browser
AA seq
561 aa
AA seq
DB search
MIPKGGPVAYLTDILIVRGVLPIEALDGLKRGQDDENQIRELVEQGIVSEVQFASARAEK
LSLPFVELVDYPVDRVAVALVPAAVCRRYQVLPIAISEGKLVLAMVDPGDVFALDDVGAA
SQMGVIRVVAERSDLTAALDRHHRADGELSDLTSAIEEDSAASESESSLGDAADDDVPIV
RFVNLIVSQAIQDRASDIHIEPAERDLRVRYRIDGVLHEMQRAPKAIQNGVISRLKIMSD
IDIAERRKPQDGRMSVMHAGRKIDLRVATLPTVWGEKIVMRILDNAESDMKLSDLGLLER
NAEAYRSSYTKPYGMILVTGPTGSGKSTTLYTTLHTVSRPEINVITVEDPVEYRMAGINQ
VQVNPKAGLTFASALRSILRSDPDVVLLGEIRDHETAQIAIEASLTGHLVLSTLHTNDAP
SAVTRLTEMGIEPFLVGSALDCVVAQRLARRLCDRCKEAYQPELSDLAVMRLFVDPGAAS
PVVHRPIGCSTCSNTGYRGRIAIHEVMLVTEEIERHAVARSASAEIMRTAKEQGMLTLRE
DGWAKVRLGHTSIEEILRVVA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgatacccaaggggggtcctgtggcatatctgacagatatcctcatcgttcgcggcgtg
ttgccgatcgaggctctcgacggactcaagcgcggccaggacgacgagaaccagattcgc
gagctcgtcgagcaggggatcgtctccgaggttcagttcgcatccgctcgagccgagaag
ctgagcctcccattcgtcgagctcgtcgactacccggtcgaccgcgtcgcggttgctctc
gttccggcggcggtctgccgccggtaccaggtgctccctatcgctatttccgagggcaag
ctcgtgctcgcaatggtcgacccgggagacgtcttcgcgctcgacgatgtgggagccgcg
tcgcagatgggtgtgatccgcgtcgtcgcagagcgcagcgatctcaccgcagcgctcgac
cgccaccaccgcgccgatggcgaactcagcgacctgacctcggcgatcgaggaagacagt
gcggcgagcgagtccgagtcttccctaggcgacgccgccgacgacgacgtgcccatcgtc
agattcgtgaacctcatcgtcagccaggccatccaggaccgggcatccgacatccacatc
gagccggccgagcgcgacctgcgggtgcggtaccgcatcgacggcgtgctgcacgagatg
cagcgcgcgccgaaggcgatccagaacggtgtgatctcccggctcaagatcatgagcgac
atcgacattgccgaacgtcgcaagcctcaggacggccgcatgtcggtcatgcacgccggc
cgcaagatcgaccttcgcgtcgcgacactgcccacggtgtggggcgaaaagattgtcatg
cgaattctcgacaacgccgagtcggacatgaagctcagcgacctcggcctgctcgagcgc
aatgccgaggcctaccgcagctcgtacacgaagccgtacggcatgatcctcgttaccggc
ccgaccggttcgggcaagtcaacgaccctctatacgacgctgcacaccgtctcgcgtccc
gagatcaacgtcatcaccgtcgaagacccggtcgagtatcgcatggctggcatcaaccag
gttcaggtgaaccccaaggccgggctcaccttcgcgagcgcgctgcgctcgattctgcgg
tcggacccggatgtcgtgctgctgggtgagatccgagaccacgagaccgcgcagatcgcc
atcgaggcctcgctcaccggccacctcgtgctctcgaccctgcacaccaacgacgccccg
agcgccgtcaccaggctcaccgagatggggatcgagccgttcctggtcggctccgccctc
gactgcgtagtggcccaacgcctcgcgcggcgcctgtgcgaccggtgtaaggaggcgtac
cagcccgaactctccgacctcgccgtgatgcgactgttcgtcgacccaggcgccgcgtcg
cccgtcgtgcatcgcccgatcggatgctccacttgctccaacaccgggtaccggggccgg
atcgcgatccacgaggtgatgctcgttaccgaggagatcgagcgccatgccgttgcacgc
tccgcgagcgcggagatcatgcgcaccgcgaaggagcagggaatgctgacccttcgcgaa
gacggctgggccaaggtgcggctcggccacacctcgatcgaggagatcctgcgtgtcgtt
gcctaa
DBGET
integrated database retrieval system
