Marisediminicola antarctica: BHD05_04820
Help
Entry
BHD05_04820 CDS
T06401
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mant
Marisediminicola antarctica
Brite
KEGG Orthology (KO) [BR:
mant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mant03016
]
BHD05_04820
Enzymes [BR:
mant01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BHD05_04820
Transfer RNA biogenesis [BR:
mant03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BHD05_04820
Prokaryotic type
BHD05_04820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QHO69068
UniProt:
A0A7L5AF52
LinkDB
All DBs
Position
1012301..1013248
Genome browser
AA seq
315 aa
AA seq
DB search
MNREQAGERPEPPTTRIRLDIAYDGGHFTGWATQPTVRTVQGAIEDALGVILRRHTPVAS
LVVAGRTDAGVHATGQVAHLDLTPAQLRSLDRPRRGKLAGRVYDGPASLGRRINGIAGID
SDVHVARSALALPGFDARFSALWRRYEYRIADTSAPRNPLERHRTLWYPAALDVGLMNQA
AASLLGLHDWAAYCKPRDGATTVRSLEEFWWDRDADGVLLARVQADAFCHSMVRSLVGAC
VAAGQGNLPVERLTGIRDELARGSEFKVMPAKGLVLVEIGYPETADGLQARADLTRNRRP
KLDAGASLTARGEVD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgggagcaagcaggcgagcggccggaaccgccgaccacgcgcatccgcctcgac
atcgcgtatgacggtggtcactttaccggctgggcgacgcagccgactgtgcgaaccgtt
cagggcgcgatcgaagacgcgctcggagtgatcctgcgccggcacactcccgtggcgtct
ctcgtagtcgcgggacgaacggatgccggagtgcacgcgaccggccaggtggcccacctc
gacctcacccccgcccagctgcgcagcctcgaccggccgcggcgtggcaagctcgccggg
cgtgtgtacgacgggccggcgtcgctcggccggcggatcaacggcatcgcggggatcgac
agcgatgtgcacgtcgcgcggagcgcactcgccctgcccggcttcgacgcccgattctcg
gccctctggcgacggtacgaataccgcatcgccgacacctcggcaccgcgcaatccgctc
gagcggcaccgcaccctctggtatccggccgcgctcgacgtcgggctcatgaaccaggcg
gcggcgtcgctgctcggcctgcacgactgggcggcgtactgcaagcctcgcgacggggcg
acgacggtgcgcagcctcgaggagttctggtgggaccgggatgccgacggggtgctcctc
gcgcgggtgcaggcggatgccttctgccacagcatggtgcgctcgctcgtcggcgcctgc
gtcgcggccgggcagggcaatcttcccgtcgagcggctcaccggcatccgggacgagctg
gcccgaggcagcgaattcaaagtaatgccggccaagggtctcgtgctcgtcgagatcggc
taccccgagacggccgacggtctccaggcgcgcgccgacttgacgcgcaaccgacgcccg
aagctcgacgcgggggcgagtttgaccgcgcgaggcgaagtggactaa
DBGET
integrated database retrieval system
