Marisediminicola antarctica: BHD05_08990
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Entry
BHD05_08990 CDS
T06401
Name
(GenBank) ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mant
Marisediminicola antarctica
Pathway
mant03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mant00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHD05_08990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mant03019
]
BHD05_08990
03009 Ribosome biogenesis [BR:
mant03009
]
BHD05_08990
Enzymes [BR:
mant01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BHD05_08990
Messenger RNA biogenesis [BR:
mant03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BHD05_08990
Ribosome biogenesis [BR:
mant03009
]
Prokaryotic type
rRNA processing factors
BHD05_08990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
QHO69757
UniProt:
A0A7L5AHH6
LinkDB
All DBs
Position
1908587..1911349
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AA seq
920 aa
AA seq
DB search
MVEYNENNDETPRKRKGLFGSRRVRSADMVPAEQSAAPVPDAVEPREQPAAEQPVAEQPA
AEQPAAEQPVAEQPALEQAVAQRASRSRRASSASAAAAPTENPTEEAAPAEPVTARRTRQ
SAAKSTATRSTAASRATKAKAETPAPDEAPAADGTPAADDTAEQSTEQSAEQPTTPEAPA
APARPSTSLLFQAPELPAYAPRQQSRDNRGGNDRDNRGESRDDGRDEDEQTTVRRRSRRR
SGEEDRDTGSSNPRNTVVKVRTPRPQPEPITEPQRIKGSTRLEAKKQRRRDGRDAGRRRP
VITEAEFLARRESVDRVMVVRAKFGRIQIGVLEDGVLSEHYVAKAQEASLIGNVYLGRVQ
NVLPSMEAAFVDIGRGRNAVLYSGEVDWDAAALENSSGGSQARRIELALKPGDKVLVQVT
KDPIGHKGARLTSQVSLPGRYLVYVPNGSMNGISRKLPDTERARLKKILKEVLPENVGVI
VRTAAEGATDEQLTLDVNRLTSQWARISETIEKAQAPALLHSEPDLLVKIVRDVFNEDFQ
KLIIEGQDAEETISSYLAQVAPDLVDRIERYESETDSFDAHRISEQIEKALDRKVWLPSG
GSLVIDRTEAMTVVDVNTGKFVGSGGNLEETVTMNNLEAAEELVRQLRLRDIGGIIVVDF
IDMVLESNRDLVLRRLVECLSRDRTKHQVAEVTSLGLVQMTRKKLGLGLIESFSENCEVC
AGRGIVIHHDPATKHRQSPQPETGRRGRKGGNGGGPTPPAPKSGTGTHAITEDARNALAK
IATSTILTQVEAHAKAETAPAEQSVSQLAALAVEQPAEEPAEQPAEQQATVEVVAPVRVE
APAETAAETPAETPVAIFDLPLKRQTRAPRKISTHDAEQILDSVLDALPEPRQAGQGRVR
TSRRASSAGTVSAPADGSQN
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggtggaatacaacgaaaacaacgacgagacaccgcgcaagcgcaagggactcttcggg
tcccgccgcgtcagaagcgccgatatggttcccgccgagcagtcggcagcgccggttccg
gatgctgtcgagccgcgcgagcagcctgccgctgagcagcctgttgccgagcagcccgcc
gccgagcagcctgccgccgagcagcccgttgccgagcagcccgccctggagcaggctgtg
gcgcagcgagcatcccgctcacgccgcgcgagcagtgcatccgcggccgccgcgcccacg
gagaacccgaccgaggaggcagcgccggcggagcccgtgacggcgcgccgcacgcgccag
agcgctgcgaagtcgaccgcgacccggtccacggcggcgagccgcgcgactaaggccaag
gccgagacccctgccccagacgaggcccctgccgcggacgggacccctgccgcagacgac
accgcagagcagtcgaccgagcagtcggctgagcagcccaccacgcccgaggcaccggcc
gcacccgcgcgcccctcgacgtcgctcctgttccaggcgcccgagttgccggcctacgcg
ccgcgccagcagtcgcgggacaaccgcggcggcaacgaccgcgacaaccgcggcgagtcg
cgcgacgacggccgtgacgaggacgagcagacgaccgtccgccgccgctcgcgccgccgc
tccggtgaggaagaccgagacacgggcagctccaacccgcgcaacaccgttgtcaaggtg
cgcacgccccgcccgcagccggaaccgatcaccgaaccgcagcgcatcaagggatccacg
cgcctcgaggcgaagaagcagcgccgccgcgacggccgtgacgccgggcgccgcaggccc
gtcatcaccgaggccgagttcctggcccgccgggagagtgtcgaccgcgtcatggtcgtg
cgggcgaagttcggccgcatccagatcggcgtgctcgaagacggcgtgctctccgagcac
tacgtcgcgaaggcccaggaggcgagcctgatcggcaacgtctacctcggccgggtgcag
aacgtgctcccgagcatggaggcagcattcgtcgacatcgggcgcggccggaacgccgtg
ctctactccggcgaggtcgactgggatgccgccgccctggagaactcctccggaggaagc
caggcgcgtcgcatcgagctcgccctcaagccgggcgacaaggtgctcgtgcaggtcacc
aaggacccgatcggccataagggcgcccgcctgacgagccaggtctcgctccccggccgc
tacctcgtctatgtgcccaacggctccatgaacgggatcagccgcaagctgcccgacacc
gagcgagcccgcctgaagaagattctcaaggaggtcctacccgagaacgtgggcgtcatc
gtgcgcaccgcagccgagggcgcgaccgacgagcagctcaccctcgacgtcaaccgtctt
acctcgcagtgggcgcgcatcagcgagaccatcgagaaggcccaggcgcctgcgctgctc
cacagcgaacccgacctgctcgtcaagatcgtcagggatgtcttcaatgaagacttccag
aagctcatcatcgagggtcaggatgccgaggagacgatttcgagctacctcgcccaggtc
gcacccgaccttgtcgaccgcatcgagcgctacgagtccgagactgactcgttcgacgcg
caccgcatctcggagcagatcgagaaggcgctcgaccgcaaggtctggctcccgtccggc
ggctcgctcgtcatcgaccgcaccgaggcgatgactgtcgtcgacgtcaacaccggtaag
ttcgtcggctccgggggcaacctcgaggagacggtcacgatgaacaacctcgaggcagcc
gaggagctggtgcgccagcttcggctgcgcgacatcggtgggatcatcgtggtcgacttc
atcgatatggtgctcgagtccaaccgcgacctcgtgttgcgccgactcgtcgagtgcctc
agccgcgatcgaaccaagcaccaggtcgccgaggtcacctcgctcggactcgtgcagatg
actcgcaagaagctcggactcggtctgatcgagtcgttcagcgagaactgcgaggtctgc
gcgggccgcggaatcgtcatccaccacgacccggccaccaagcaccgccagtcgccgcag
ccggagaccggccgccgcggccgcaagggcggcaacgggggagggcccacccctccggcg
ccgaagtccggcacgggaacccacgcgatcacggaggacgcccgcaatgccctcgccaag
atcgcgacgtcgacgattctcacccaggtcgaggctcacgccaaggccgagacggcaccg
gccgagcagtcggtgagccagctggccgcgctcgcggtcgagcagcccgccgaggagccc
gccgagcagcccgccgagcagcaggcgaccgtcgaggtcgtcgcgcccgtccgggtcgag
gcacccgcggagacagccgcggagacacccgccgagactccggtcgcgattttcgacctt
cccctgaagaggcagacgcgcgcgcctcgcaagatctcgacgcatgatgccgagcagatt
ctcgactcggtgctcgacgcgcttcccgagccgcgccaggccggacaggggcgcgtgcgc
acctcccgccgcgcatcctcggccggaaccgtgtcggcaccggccgacggctcgcagaac
tag
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