Misgurnus anguillicaudatus (oriental weatherfish): 129413525
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Entry
129413525 CDS
T09481
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129413525 (vps13a)
Membrane trafficking [BR:
manu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129413525 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
129413525
NCBI-ProteinID:
XP_055023190
LinkDB
All DBs
Position
13:complement(29992957..30058408)
Genome browser
AA seq
3230 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVGNLDSSQLSLGIWGGDAILRNLIIKENALSQLDIPFKVRAG
HIGRLELKIPWKNLYTQSVEATLDEVYLLIVPTASIKYDAEKEERQLQEARQRELQRIEE
TKQKAAEKENPKAEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDVTNPSCPLSFGVSLQ
NLSLQTADQNWNPCLLDEKAKLFFKLVRLDNLFAYWNVNSELYSYHNPDEALRLLRHSVA
VKNAIPQDYHFIFRPISANAKLRMNPRSDVDFSSPKVDLSVNLPEVAVELSRPQYVSILE
LLGSVDMMTRNLPYRKYRPNVPVHTNARQWWRYVITGVLEVNVKPSLHMWSWHHIRRHRQ
HVKKYRELYKNKIISKKPADALLKELEENEKTLDIFNITMARQQAEMEASKAGLRIYRPG
VKVEEEQSQGWFGWMWSWSGDSATPTTDVKTGGFDDLMTPAEKAKLYAAIGYSETAVNPN
LPKNFESMKINFQLLNLSLSIKESREKPEIIKLSVIDLKAMLAQRPAAQAIKVSAQLSSF
EVSGLPRGQKPPVLLSPRHEAGAKDKTLLNLMFETNPLDGLSDQKLHIDSRPLEIIYDAM
TVNSLSAFFMPPKDLQLDELTNATLMKLEQFRDKTSTGLMYIIETQKVLNLNINLMASYV
IVPENGFYDPKHNLAILDLGHFQMSSKSRAGLPQLSIGSSTIEDIMSRAYDSFDVQLSSL
QFLYTKAGGDWKRARPLRQSSFHILEPVDLKVVFSRAMVVTDPRMPKFKIFGELPLLSLR
ISDDKVRGVLALLSSIPLPESRPAPTKAPQVTPKVSKRGNTPQLTPRRPAIDDLRASIIY
GSDEELFFDAPSSPVEDLPFFEASSDSLQMSADKRMSMVLKDPKKNMTEFSMNFEINKLS
VQLCRLSKGQEVSVLHLFIDGLGTELNLRTFDMSSKTFLKEICLECSEYLDSEDKKVHLI
TTLDNTEEDLLMLEYIKADKNAPDFKTMYKNTEQMIKVNFSSLDVHLHTEALLNSMNFLN
NLLPPLKKDAQGDQPLPTIEEEEEEEEESKVEESAITKSASKKSKYEDVVNLHIRADLNC
LKVFIRGEKARISEISIEGLVSEVQMMKKSVEILANLRNIVILDCDKEALYKKAVSIVDK
EVFKFRMVNLVDATEGDAYMDMHIVDTSVTLSVGCIQVIFLNKFVSSILAFVNNFQEAKN
ALAEVTAQAAEKAATGVLELAERSTRISLDVNIKAPVVFLPQSSVSHNVIVADLGLVTVK
NHFEIVSSPTHTKIPPVMDIMAVGLSDLKMFRTTFSDGKFKDEIQLLKPVNMDLSIKRNL
SASWYHSIPDIQINAHLKPMSLILSQEDLTIVLKTLSENLSESSDVPQAPSSSDKADTLS
TKDSQGSSGKRNTVVTAAVVEGQKPGKLKTTLKLDFKFDSMTLVLYSPNANEICLQDSRD
ESFKLAEFKLGTISTSVHMYSDSSMKASLKLTNCLLDDKRQRAKMITSRMMAMRQGREDN
VMVDVSYRQGRDGTNLDTLIQDFYLCASMEFLLTVADIFLKAMADGFSGPPKTNKQPASS
SKEIAVPAQPVVAKTEMKVVVKNPEIVFVADLTRADAPALVVTTQCELLMKSEPSGQSMT
AGVSDLKVVACPFLREKRENNVTTVLQPCEVFFQSSQSSTQPQTIELSISSLTLKVSPII
INTVITIQSALSPAAETPEELKSPVPYDLWEPRSLQDLKLWFLEEEGEEDTRSVIPLIPQ
GESMNMNIGSICLTLEAGVGHRTVPMLLAKASFQGDVKNWSTLINLHCHLDLEVNYYNEM
MGLWEPLLEPLDDEGKDGFRPWKLALKMKKKPVAYSGVSDEVDGGVPDYKTVICLSSKDQ
LNITLSKCGLHMLGNLGTAFAEAAKQTAECIQTDQAPFVVKNHLGLAVSVLCSEVFRPIG
KESVKRVVELQDGESLNMDYTAESSDQFSAMTSLSTKNYIKPTPVGHTNENILPLIKTGL
GMYSVVHNDSQVTRFIVCQIYTVEGSKYVKIRSPFQIVNHFSVPFRVYEGSVCLGMSLPT
EEFCVPLGSYRAELSLQPVPEGEEVYDRSEGFTYKEVIQKPGECLQKTCHHHGDSALMMK
VNMVPLPDTVTSHSTEEEFDKPFVLHLWPTVLLRNLLPYPITCRLKVSGDSPPAVLKEGH
SSQIHTAIMDFSILELKLLGYLQQDWEAQYNITSDQEEIGFIKFHSLRLDDETEAKAELD
IAVHVKKEEGQVVVAIHSPYWMVNKTGRLLQYKADDIHRKHPKDNDMPLLFSFKPRNFLQ
NNKVRLMISESELSVDFSIDTVGSYGVVKCKGRQKDYLVGVKIDASSFSLTRLVTFLPFY
MLVNRTKHLIWVCEEGQEHWTEARPGQAAVPFWPERDSKKLRVKVEGCQSSPRAFDLHQP
ENCLLLHLDKTLGGIIVDLNLTEHSAVIRFSDYHDGAAPFLLINHTKDETLQFHQSRRKP
KGSTWVPDDILDVSLSIGDETESLCSQAEIDELGPGQAVYYTWAEPTGSRILRWRWGKFK
GELKSEEDQLLDMNKEGKLFVISFYEGLQRVALFTTDRRVYKLICDSEKMEVAQQEISIL
LQNIGVSLVNNTNSQEVAYIGITSSDVVWETKLKKRSRWKCMSVKEAGLLEQHYQAYMEN
GPVDSSLINLENDYQVLFSANGVDMRVLEPFDAPLRRNFLPALKVEYSVSARQKTYRVQI
NRIQIQNQLPGAIFPFVFYPIKPPKSVSMDSEPKPLADVSIITRAAGHSDILRIKYFKVL
IQEMDLRMDLGFLYAILELFTAEHASAVTSEQEVELFEKDIEYLKTELNHVSATDTSAIS
LYEYFHISPIKLHLSFSLSSGGEDGNKKERETEIIPVQSLNLLLKSIGATLTDAQDVLFK
LEFFELRYQFRTTQQLQWEVIRHYSKQAIKQMYVLVLGLDVLGNPYGLIRGLSEGVEAFF
YEPYQGAIQGPEEFMEGMALGVKALVGGAVGGLAGAASRITGAMAKGVAAMTMDEDYQQK
RREAMNKQPSGLREGLARGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGMGKGLVG
ALTRPTGGIIDMASSTFQGIKRAAETSQDVVSLRPPRFFHEDGVIRPYKEREGIGSQMLQ
SIENGRFAKYRYFAHAKVNDSDFLMITKRGIFFVTKGTFGQLTCEWQYLFDEFTKDPMIV
EGRRLRIEAKERVKSVFHAKEFGKIINFKTPELAKWVLAKLEDAREGLTK
NT seq
9693 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgagtctgtggtggtcgatgtcttgaacagatttctgggagattatgtgggg
aacctcgacagctcgcagctcagtctcggcatatggggaggtgatgccatattgagaaac
ctgataataaaagaaaatgccctgagtcaactagacattccttttaaagtccgggcggga
cacataggtcgcttggaattgaaaatcccgtggaaaaacctgtacactcagtctgtggag
gcaacgctggatgaagtctatttgcttatcgtacccactgctagtataaagtatgatgcc
gagaaagaggagcgtcagctgcaggaggcgcggcagagggagctacagcgcattgaggag
accaaacagaaagctgcagagaaagagaatccaaaagctgaaaagcaggatacatttgtg
gagaaactggtcacacaggtgatcaaaaacctacaagtgaaaatctccaacatacacgtc
cgttatgaggatgatgtcaccaatcccagctgcccgctgtcgttcggggtgtccctgcaa
aacctcagtcttcagaccgctgatcagaattggaatccctgtcttctggatgagaaagcc
aagctgttttttaagcttgtgcgtttggacaatctctttgcttattggaatgtgaattct
gaactctattcctaccacaatcctgatgaagctctgcgactcctaaggcacagtgtagcc
gtcaagaatgccatccctcaggattatcatttcatcttccgtccaatatctgcaaatgcc
aaactacgaatgaatcctcgctcggatgtggacttctcatcgccgaaagtggatctttcg
gtcaacctgcctgaggttgcagttgagcttagccggccacagtacgtcagcattctggag
cttttgggctcggtggatatgatgactcgtaatcttccatacaggaaatatcgtccaaac
gtgccagttcacactaatgctcgtcagtggtggagatatgtgatcacgggcgttttagag
gtgaatgtcaagcccagccttcacatgtggtcatggcatcacattcgccgtcatcggcaa
catgtgaaaaagtacagagagctctacaagaacaagatcatcagcaagaaacctgcagac
gctctgctgaaggagcttgaggaaaatgaaaaaactcttgatatattcaacatcaccatg
gcgagacagcaggctgagatggaggcctcaaaagcaggcctgcgaatatatcgtcctggc
gtgaaagtggaggaagagcagtcacagggctggtttggctggatgtggagttggtctgga
gacagcgctacaccaactacagatgtcaaaacaggaggttttgatgacttgatgactcca
gcagaaaaagccaaactatatgctgctattggatacagcgagacagccgtcaatcctaac
ctgccaaaaaattttgagagtatgaagatcaattttcagctgctcaacctgtcgctgtcg
atcaaagagagtcgagaaaagccggagataatcaaactgtccgttattgatcttaaggcc
atgttggcgcaaagacctgcagctcaagcgataaaggtctctgcccaactgtcatctttt
gaagtgtccggtcttccacgtggccagaagccccccgtcctgttgtcacctcgtcatgag
gccggggcaaaggataagactctcctgaatctcatgtttgagaccaatccactcgatgga
ctttcagaccagaaactacacatagattctcggccacttgagatcatctacgatgctatg
actgtaaacagtttgtcagctttcttcatgcctccgaaagacctgcagctggatgaactg
accaatgccaccctcatgaagctggagcagttcagagacaagacctctacgggactcatg
tacatcattgaaactcagaaggtcctcaatctgaacatcaacctcatggcttcatacgtc
attgtacccgagaacggcttttatgaccccaaacacaaccttgccattctggatttaggt
cattttcagatgtccagtaagagcagagccggactccctcagctttccataggcagcagc
accatagaggacatcatgtctagagcatatgacagctttgatgtccagctaagcagctta
cagtttctctacaccaaagcaggtggtgactggaagagggcgcgtccgctcagacaatca
tcctttcacatcctggagcctgtcgatctgaaggtggtcttcagtcgagctatggtggtc
acggaccccagaatgcctaagtttaagatttttggtgaactccctctgctgtctttgcgc
atctctgatgataaagtgcgcggcgtcctggcattgctcagcagcattcctcttccagag
agccgccctgccccgactaaagcaccacaggtcacacccaaggtctccaagcgagggaac
acgcctcagctcacgcctcgaagaccagccatagatgacctgcgtgcatccatcatatat
ggctcagatgaggaattattcttcgatgctcctagttcaccagtagaagatttgccgttc
tttgaggcgtcatctgactccctgcaaatgtctgccgataagagaatgtctatggtgcta
aaggatcccaagaagaacatgacagagttctccatgaattttgagatcaataagctttct
gttcagttgtgtcgcttgtcgaagggacaggaagtgagcgtcctccatctgttcattgac
ggtttagggactgaactcaatcttcgcaccttcgatatgtcatcaaaaaccttcctaaag
gagatctgccttgagtgttcagagtacctggattcggaagacaagaaggttcaccttata
acaactttggataatactgaagaagatctgctcatgctggaatacattaaggctgacaaa
aatgcccctgattttaaaactatgtataaaaacacagagcaaatgatcaaggtgaatttc
tcctcgctggatgtacatctgcacaccgaggcgctcctcaactctatgaatttcctaaat
aacctcctcccacctctcaagaaagacgcacagggggaccagcctctccctactatagag
gaggaggaggaggaggaagaggagtcaaaagtagaggaatctgctatcaccaaatctgcc
agtaagaagtcaaagtatgaggatgtggtgaatttgcacattcgagcggacctgaactgt
ctgaaggtcttcataagaggagagaaagcccgaatctctgagatcagcatagaagggctg
gtttctgaagttcagatgatgaagaagtcagtggagattttggctaacctaagaaacatt
gtaattctggattgtgacaaagaggctctgtacaaaaaggcggtgtccattgtagacaaa
gaggtgtttaaattccgcatggtgaaccttgtggacgcaacagaaggcgacgcctacatg
gacatgcacattgtggacactagtgtaacactatctgtgggctgcattcaggtcattttc
ctcaacaagtttgtgtcctcaatactggcattcgttaacaattttcaggaagcaaaaaac
gctttagcagaggtgacggctcaggcagcagagaaagctgcaacaggggtcctggagctg
gcagagagaagcacacgaatctccctggatgtgaatatcaaagccccagttgtcttcctg
ccacaatcttctgtttcccacaatgtcattgtggcagatctgggtttagtaactgtgaag
aaccactttgagatcgtctcctctccgacccacaccaagatcccacctgtgatggacatc
atggctgtgggacttagtgatcttaagatgttcagaaccacctttagcgatggaaaattt
aaggatgagattcagttgcttaaaccggttaatatggacctgtcaatcaaacgaaatctc
tccgcctcctggtatcatagcattcctgacatacagatcaatgcacatctaaaacccatg
agtctgatcttgagtcaggaggatctgactatagttttaaaaactctaagtgagaatctg
tccgagtcttctgatgttcctcaagctccatccagctctgataaagcagacacgttgtcc
actaaggactctcagggatcgtcaggtaaacggaacactgttgtgacggcagcagtggtg
gagggccagaaaccaggcaaactgaaaaccactttgaaactggactttaagtttgactcc
atgaccctggtcctgtacagcccaaatgccaacgagatctgtttgcaggactcacgtgat
gagagttttaagttggcagagttcaagttgggcaccatctccacttcagtccacatgtat
tctgatagctcaatgaaagcttccctcaaactcacaaactgtctgctggacgataaaaga
cagagagcaaaaatgatcacatccaggatgatggccatgcgtcagggcagggaagacaat
gtgatggttgacgtgagttataggcaaggccgggacggcaccaatctggacactttgatt
caggacttctacctgtgtgccagcatggagtttttgctcacagtagctgatatctttctt
aaagctatggcagatggcttctctggtcctccaaagaccaacaaacagccagccagttca
tctaaagagatagcagttcccgctcaaccagtggtagccaagactgagatgaaagttgtg
gtaaagaatcctgaaatcgttttcgtggccgacctcacgcgcgctgatgccccggctctt
gttgtgacgacccagtgcgagctgctgatgaagagcgagcccagtggacagtcaatgacg
gcgggcgtatcggatctgaaggtggtggcgtgtccgttcttgagggagaagcgcgagaac
aacgtgacgacggtgcttcagccctgcgaggttttcttccagagtagccaatcatctact
caacctcagaccatcgaactgtccatcagctcgctcacacttaaggtttctcccatcatc
ataaacactgtcatcaccattcagtcagcactaagccctgcagccgagaccccggaggag
ttgaaaagccccgtgccttatgatctatgggaaccccgtagcctacaagacttgaagctc
tggtttctggaggaggagggagaagaagacacccgctccgtcattcctctcattccacag
ggagaatctatgaatatgaacatcggctctatctgtctgacgctagaggctggcgtgggc
catcgtaccgtgcccatgcttctggccaaagcctcgttccagggagatgtgaagaactgg
agcactcttataaaccttcactgtcatctggacctggaggtgaattattataatgagatg
atgggtttgtgggagccgctgttggagccgctggacgatgagggcaaagatggatttaga
ccctggaaattagctcttaagatgaaaaagaaaccagtggcgtattctggagtatccgat
gaggtggacggcggtgtgcctgattataaaacggtcatctgcctttcgagcaaagaccag
ctcaacatcacgctctccaagtgtggtttgcatatgctcggtaatctgggaacggcgttt
gcagaggctgctaagcagacggccgagtgcattcagacagaccaggctccgtttgtggtg
aaaaatcacttgggtttggccgtgtcggtgctttgtagtgaagtatttcgacctattggt
aaagagtctgtaaaacgtgtggtggagcttcaagatggagagagtctaaatatggactac
acagcggagtccagtgaccagttctctgccatgaccagtctcagcaccaaaaactacata
aagcccactcctgttggccacactaacgaaaacatcttgccactaatcaaaacaggactg
ggtatgtacagtgtcgtacacaatgattcgcaagtcacacgtttcattgtgtgccagatt
tataccgttgagggcagcaaatatgtcaagatccgctctcccttccagatcgtcaatcat
ttctccgtaccgttccgggtttacgagggttcggtgtgtctgggcatgtctttgcctaca
gaggaattctgtgtgccattgggttcctacagagctgagctgagcttgcagcccgtacca
gaaggcgaggaagtgtacgatcgctcggagggcttcacatacaaagaggtgattcagaaa
cctggagagtgtttacagaaaacctgccatcatcacggagacagcgccctgatgatgaag
gtcaacatggttcctcttccagacactgtgacatcacacagtactgaggaagagttcgac
aagcccttcgttctgcatctgtggcccaccgttctcctccggaaccttctgccgtaccca
atcacgtgcaggttaaaggttagtggagattctccccccgctgtacttaaagagggccac
tcctctcaaatccacacggctatcatggatttttccattctggagctgaagcttcttgga
tatctgcagcaggattgggaagcccaatacaatatcaccagcgatcaagaagagatcggc
tttatcaaattccattcgctaagattggacgatgaaaccgaggcgaaagcagagctagac
attgctgtccacgttaagaaggaggagggtcaagtggtcgtggccattcactcaccgtat
tggatggtaaataagacaggcagactgctgcagtataaggcggatgatattcatcgcaaa
catccgaaggataacgacatgcccctcctcttttccttcaagccgcgcaacttcctgcag
aacaacaaggttcgcttgatgatctcagaaagcgagctgtcggttgatttttccattgat
acggttgggagttacggggttgtgaaatgcaaaggaaggcagaaggattacctggttggg
gtgaagatagatgcatccagcttcagtttgacacggttggtgacattcctgcccttctac
atgctggtgaacagaaccaagcacttgatctgggtttgtgaggagggacaggaacactgg
acagaagcccgacctggacaggccgccgttccattctggccagaaagagactcaaagaaa
cttcgagtcaaagttgaaggctgtcaatcatctccacgggcctttgatttgcaccaacca
gagaactgcctcttgctgcacctggacaaaacactgggcggcatcattgtagacttgaac
ttgacagaacattctgctgtcatccggttctctgattatcacgatggcgccgctccgttc
ctcctcatcaaccacacaaaagatgagacgctgcagtttcaccaaagtcgcagaaagcca
aaaggttctacttgggttccagatgatatactggatgtttctttatcaataggggatgag
actgagtccctctgctctcaggctgaaatcgatgagctgggtccgggtcaggcagtgtac
tacacgtgggccgagcccaccggctctcgaatcttaagatggagatggggcaaatttaaa
ggagaactcaagagtgaagaggatcagttgttggacatgaacaaggagggaaaactgttt
gttatctcattttacgaaggcctccaacgcgtggcgctttttaccacagaccgtcgcgtt
tataagctgatttgcgatagtgaaaaaatggaggtggctcaacaggaaatcagcattttg
ttacagaacataggcgtttcattggtcaacaacaccaacagccaggaagtggcctatatt
ggcatcaccagttctgatgtggtttgggagactaaactcaagaaacgcagccgatggaaa
tgtatgagcgttaaagaggctggactgttggagcagcactaccaggcatatatggagaat
ggcccggtggacagctctctcatcaacctagagaacgactaccaggtgttgttctctgct
aatggtgtggacatgagagtactggagcccttcgatgctcctctcaggagaaacttcctc
ccagcactgaaggttgagtacagcgtgtcggcccgccagaaaacctacagggtccagatc
aacagaattcagatccagaatcagttgcctggagccatcttcccatttgtgttctaccct
attaaaccacccaagtcggtcagcatggactcagagcctaaaccacttgctgatgtcagc
atcatcaccagagcggccgggcactcggacattctgcgaatcaagtattttaaggtgttg
attcaggagatggacctgcggatggaccttgggttcctgtatgccatattagagctcttc
actgccgagcacgcgagtgccgtcacgtctgaacaagaggtcgagttgttcgagaaggat
attgagtatttgaagactgagttgaatcacgtttcagcgaccgacacgtccgccattagc
ctgtatgagtactttcacatctctcccataaagcttcatttgagtttctctctgagctcc
ggtggtgaagatgggaataagaaagagagagagactgagatcattcctgttcaatctcta
aaccttctgctgaagagtatcggagccacgctcactgacgctcaggacgtcctattcaag
ttggaattcttcgagttgaggtatcagtttcgtaccacccagcagttacagtgggaagtg
atccggcattactctaaacaggcaatcaagcagatgtacgttctggttttgggtttggat
gtgcttggtaatccgtacggactgatccgtggtctgtctgaaggagttgaggccttcttt
tatgagccctaccagggagccatacagggcccagaggagtttatggaaggaatggcactc
ggtgtgaaagctctggttggaggggctgtgggcggtcttgcgggagctgcgtctcggatc
acaggggcgatggctaaaggtgtggctgccatgacgatggatgaggattatcagcaaaag
agacgagaagcaatgaataaacagcccagcggtctccgagagggcctggcgcggggaggg
aaaggacttgtatctgggtttgtgagtggcatcactggaatcgtgactaaacccattaaa
ggagctcaaaaagaaggtgcagccggtttctttaagggcatgggaaaaggtttggttgga
gctctgaccagaccaacaggtggcatcattgacatggccagcagcacctttcaaggcatc
aaaagagctgcagagacgtctcaagacgtggtgagtttacgtccaccgcgtttctttcac
gaagatggagtcatccggccgtataaggagagagagggaataggcagccaaatgctacag
agtattgaaaacgggcggtttgcaaaatataggtattttgctcacgctaaggtgaacgac
tccgatttcctgatgattactaaaaggggaatatttttcgtgacaaagggaacgtttggt
cagttgacatgtgaatggcagtatctctttgatgagtttactaaagatcctatgatcgtt
gagggccggagactacgcatagaagcgaaggaaagagttaaatctgtgtttcatgccaaa
gagtttggaaagatcatcaatttcaaaactccagaattagccaagtgggttcttgccaag
cttgaagatgccagggaaggtctgacaaaataa
DBGET
integrated database retrieval system
