Misgurnus anguillicaudatus (oriental weatherfish): 129413722
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Entry
129413722 CDS
T09481
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04142
Lysosome
manu04144
Endocytosis
manu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129413722 (cltcl1)
04142 Lysosome
129413722 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129413722 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129413722 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
manu04147
]
129413722 (cltcl1)
Membrane trafficking [BR:
manu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
129413722 (cltcl1)
Exosome [BR:
manu04147
]
Exosomal proteins
Proteins found in most exosomes
129413722 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_Vps41
HEAT_Nup120
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
129413722
NCBI-ProteinID:
XP_055023462
LinkDB
All DBs
Position
13:6656825..6696689
Genome browser
AA seq
1683 aa
AA seq
DB search
MTQILPIRFQEHLQLQTLGVNPGSISFSCLTMESDRFICIREKVGDQNQVVIIDLNDPTN
PIRRPITADSAIMNPASKVIALKAGRTLQIFNIELKSKVKSYSMKEDVLFWKWISVNTIA
LVMDTAVYHWSMEGDSQPIKMFDRHASLAGCQIINYRTDDQQKWLLLIGISAQQNRILGA
MQLFSVDRKVSQPIEGHAAAFGVYKLEGNPNPSTLFCFAVRGQAGGKLHIIEVGQPQAGN
QPFTKKAVDVFFPPEAQTDFPVAMQVGAKHGVIYLITKYGYFHMYDLESGTCIYMNRISA
ETIFVTAAHSSTSGIIGVNKKGQVLSVCVEEENIVKYVTSVLQNPELALRMAIRSDLSGA
EELLVHKFNTLFSQGNYTEAARVAAAAPRGVLRTAETIHRFQSAPPQGGRPSPLLQYFGV
LLDRGQLNKLESLELCRPVLEQGKTQLLEKWLKGEKLECSEELGDLVRSADITLALSVYL
RANVPAKVIHCFAETGQFQKIILYAKKVGFSPDWVMLLRGVMRSSPDQGLQFAQMLVQDE
QPLVSVSQVVDVFMEGNLVQQCTSFLLDALKNNRPEEGPIQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCENAGLLQRALEHYSDPHDIKRAIVHTHLLNPEWLVNFFGSLSV
GDSVECLKAMLAANLRQNLQLCVQVATKYHEQLGTQTLVELFETFKSNEGLFYFLGSIVN
FSQDPDVHLKYIQAACRTGQIKEVERICRESSCYNAEHVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDTIKSLIQAVRGNF
STDQLVEEVEKRNRLKLLLSWLESRVQDGCKEPATHNALAKIYIDSNNSPERFLRENPHY
DSVTVGHYCEKRDPHLAFVAYERGQRDLELIQVCNENSLFKSESRYLVRRKDPDLWATVL
EETNPYRRPLIDQVVQTALPETQDPEELSVTVKAFMTADLPNELVELLEKIVLDNSIFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFSIFKKFDVNTS
AIQVLIDHTGNLDRAYEFAERCGEGAVWSRLAQAQLHKGLVKDAIDSYIKAGEPSAYMEV
IDAASRNGDWEDLVKFLQMARKKARESYLDTELIFALAKTKRHTELEDFINGPNNAHIQQ
VGERCYEDEMYEAARLLFNNVSNFARLASTLVRLGEFQAAVDSARKASCTRTWKEVCFAC
VDGEEFRLAQISGLHIVTHADELEELISYYRNRGYFEEIIMLLESALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIMMMIS
HPTDAWRDASFKELIIKVANVELYYKSLQFYLDYKPLLLNDLLSVLTPRLDHNRTVNYFR
GVNQLRLIKPYLRSVQSHNTRAVNEALNNLLMDEEDYQGLQASIDAYDNFDSIGLAQRLE
SHELLEFRRIAAYLYKRNQRWTQSIQLCKKDKLYKDAMQYATESKDADLAQDLLRWFIQE
GKQECFAACLFTSYDLLSPDVVLELAWRYGLVDFAMPYFIQVMREYLKKVDELARQVKVD
ELQDAENKRASEDDVPDATSIVFGQQLMLNSNQTPITPQSGFSGYGYTPPGFVPPAYGFN
PQP
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagattctacctatccgcttccaggagcatctgcagctgcagacgttgggagtg
aatcccggcagcatcagtttcagctgtctgactatggagtctgaccgcttcatttgcatc
agagagaaagtgggtgatcagaaccaggtggtaatcatcgacctgaacgaccccaccaac
ccgatccgacggcccatcacagcggacagtgccatcatgaacccggccagcaaagtcatt
gcgctgaaagcgggacgaacgctacagatctttaatatcgagttgaaaagcaaagtgaag
tcttatagcatgaaagaggacgtcctcttctggaagtggatctctgttaacaccattgct
ttggttatggacacggctgtatatcattggagcatggagggagacagtcagccaatcaaa
atgttcgatcgtcacgccagcctcgctggatgtcagattatcaattacagaacagacgat
cagcagaaatggttactgctcatcggtatatcagctcagcaaaatcgtattctaggcgcc
atgcagttgttttctgtggatcgtaaagtgtctcagcccattgaaggtcacgctgcagcg
tttggagtctataaactggagggaaacccaaatccttcaactctcttctgctttgccgtc
aggggccaagctggtggaaagctgcacatcattgaggtcggtcaaccccaggcaggtaat
caacccttcactaaaaaagcagtggacgtctttttcccccctgaagcgcaaacagacttt
cctgtagccatgcaggtcggtgctaagcatggcgttatctacctcatcactaaatatggt
tatttccacatgtatgatctggagtcaggcacgtgtatatacatgaatcgcatcagtgct
gaaaccatatttgtaacagccgctcacagcagcacgtctggaatcattggggtcaataaa
aagggtcaggtgctgtctgtatgtgttgaagaggagaacatagtgaagtatgtaacaagt
gtgctgcagaatcctgagctcgccctgcggatggcgatacgcagtgacctctctggagcc
gaagagctcctcgtacacaaattcaacacactgttctctcagggcaactacactgaagcc
gccagagtcgctgccgcagctcccaggggagttttacgaacggcagagaccatccacagg
ttccagtcggcaccgcctcagggtggacggccgtctccactgctgcagtatttcggggtt
cttttggatcgcgggcagctgaataaactggaatcgctggagctctgcaggcccgtactg
gaacagggcaaaacccaattattggagaaatggctgaagggagaaaagctggagtgttca
gaagagttgggcgatctggtgagatccgccgacatcaccctagcgctcagcgtttatctc
cgagcaaacgttcccgccaaagtcattcattgctttgcagagacaggacagtttcagaag
atcattctctatgctaaaaaggtgggattttctccagactgggtgatgttgttgaggggc
gtgatgagatcaagtcctgaccagggccttcagtttgcacagatgcttgttcaggatgaa
cagccgctggtcagcgtcagtcaggtggtggatgtctttatggagggtaatctagtccag
cagtgtacttcatttctattggacgctctaaagaacaacaggccggaggaggggcctata
cagacacgcctccttgagatgaacctcatgcacgccccacaggttgcagatgcaatactg
ggtaatcagatgtttacgcattatgatcgtgcacacatcgctcaactgtgtgagaacgcc
ggattgctacagagagcacttgaacactacagcgatccgcacgacatcaaacgagccatc
gtacacacgcatctgctcaatcctgagtggttggtgaatttcttcggctctctctctgtt
ggagattcagtcgagtgtttaaaggccatgttggctgcaaacctcagacagaacctacag
ctgtgcgttcaggtcgcgaccaaatatcacgagcagctgggaactcaaaccctggtggag
ctttttgagactttcaagagtaacgagggtctgttttattttttgggctccatcgtgaac
ttcagtcaagaccctgatgttcatctaaagtacattcaggctgcatgtcggaccggtcag
attaaagaagtggagcggatctgtagagagagcagctgctataacgccgaacacgtcaag
aacttcctcaaggaagccaaactgacggatcaactgcctctcatcatcgtgtgcgaccgc
ttcgatttcgttcacgatctcgtgctgtatttataccgcaacaacctgcagaaatacatt
gagatctacgtgcaaaaggtgaatcccagtcgtctgcctgtggttgttggcggtttgtta
gacgtggattgttcagaggacaccattaagagtctgattcaggcggtacgtggaaatttc
agtaccgatcagctggtggaggaggtggaaaaaagaaacagactgaagttgcttttgtcc
tggctggaatcccgtgtgcaggacggatgtaaagaacctgctacccataatgctttagca
aagatctacatagacagtaacaacagtccagaacgctttctcagagagaacccacattac
gacagcgtgacagtgggacattactgtgagaagagagatcctcatctggcgtttgtggct
tatgagagaggccaacgtgacctggaactcatacaggtctgcaatgaaaactctctgttt
aaaagcgaatcgcgttatctggtgcgacggaaagatccggatctttgggccacagtttta
gaggagacaaatccttacagacgacccctgatagaccaggtggttcagacggctctacct
gagacacaagatccagaagaattatctgtgacagtgaaagcatttatgacggccgatcta
cccaatgaactcgtagagctactagagaaaatagtgctggacaattcaatatttagtgaa
cacagaaacctgcagaacctgctgatattgacagcgataaaagcggaccgaacacgtgtt
atggaatatatcaaccgcctggacaattacgacgcccctgacatcgccaacatcgccatt
agcaatgaactgtatgaagaagccttctccatctttaagaagtttgatgtcaacacctcg
gcaatacaggttctgatcgatcacactgggaatctggaccgtgcgtatgagtttgcggag
cgctgtggtgagggagcggtgtggagccggctcgcacaagctcagctgcataaaggtctg
gtgaaagacgccattgactcttacatcaaagctggagaaccgtctgcgtatatggaggtg
atcgatgcagccagtagaaacggtgactgggaggatctggtgaagtttcttcaaatggcc
agaaagaaagcgagagagtcttacttagacacagagctcatctttgctctggccaaaaca
aagcgtcatacagagctggaagattttatcaacgggcccaataatgctcacatacaacaa
gttggagagaggtgttatgaagatgagatgtatgaagctgcccgtctgctctttaataac
gtgtctaattttgctcgtctggcgtccacactcgttcgcctcggcgagtttcaggcggcc
gtggacagcgctcggaaggccagctgcacacgcacatggaaagaggtgtgttttgcatgt
gtagatggagaggaatttcggttagcgcagatctccggtcttcacatagtgactcacgct
gatgaacttgaagaactcatcagctactatcggaatcgtggttattttgaagagattatc
atgttgttggagtctgcgttaggattggagcgcgctcacatgggcatgtttaccgagttg
gcaatactctactctaaattcaaaccgcagaagatgagagaacatctggagctcttctgg
tccagagtcaacatcccaaaggtgttacgagcagcagaacaggcccatctgtgggcggag
cttgtgtttctgtatgataaatatgaggagtatgacaacgccattatgatgatgatcagt
cacccgacagatgcttggagagatgcttcatttaaagagctcatcatcaaggtggcgaat
gtggaactctattataaatctctacagttttatttagactataaaccccttctgctcaat
gatctgctgtctgttctcacacctcgactggaccacaacagaactgtcaactacttcaga
ggggtgaatcaattgaggctgattaaaccgtatctcagatcagtacagagtcacaatacc
agagctgtgaatgaagccctaaacaacctgctgatggatgaagaggactatcagggtctg
caagcctccatagacgcctatgataactttgattctattggtttagctcagcgactggag
tcacacgagcttctggagttcagacgcatcgctgcgtatctctacaagagaaaccaacgc
tggactcaaagcattcagctctgcaagaaagacaaactttataaagatgcgatgcagtac
gccacagagtcgaaggacgctgatctggctcaggatcttctgcgttggtttattcaggag
ggtaagcaggagtgtttcgcagcgtgtctcttcacctcctatgatcttctgtcgcctgat
gtcgttctggagctggcctggagatacggcctcgtggactttgccatgccttacttcatt
caggtgatgagagagtacctgaaaaaggtggatgagttagccagacaggtgaaggtggat
gaacttcaggatgcagaaaataaaagagcatcagaagatgacgtccctgatgccacatcc
atagtttttggacaacagttgatgttaaacagcaatcaaacacccatcacaccccagtcg
ggtttttcgggttatggatacactcctcctggatttgttcctccagcatatggcttcaac
cctcagccttga
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integrated database retrieval system
