KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129413846
Entry
129413846         CDS       T09481                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03420  Nucleotide excision repair
manu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:manu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129413846 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129413846 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:manu04121]
    129413846 (ercc8)
   03400 DNA repair and recombination proteins [BR:manu03400]
    129413846 (ercc8)
Ubiquitin system [BR:manu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     129413846 (ercc8)
DNA repair and recombination proteins [BR:manu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      129413846 (ercc8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_WDR75_2nd WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd Nucleoporin_N
Other DBs
NCBI-GeneID: 129413846
NCBI-ProteinID: XP_055023618
LinkDB
Position
5:complement(31276335..31287818)
AA seq 400 aa
MLSFLYARQSGLDDPVRLRRAESTRRVLSLELNHDRDVDRIHGNGINSLDIEAIEGRYML
SGGSDGVIVVYDLENSSKKPHYTCKAICTVGRSSRYVHKFSVETVQWYPHDTGMFVSSSF
DKTMKVWDTETLKPAEEFQFDGNVYCHHMSSIARKHCLIAVGTKDPKVQLCDLKSGSRIH
ILQGHRGEILSVRWSPRYEHILATASTDSRVRVWDVRRATGSLFTLDEHNGDKSKVSSEG
VNTAHNGRANGLCFTDDGLYLLTTGTDDRMRLWNSATGENTLINYGKVVNESRKGLKFTV
SKGCNPEFVFVPCGSSVAVYGLHSGELITMLRGHYNYVDCCEFHPDYQELYSGGKDCNIL
AWVPVLRQPDMEDEGSNTAKGGPQAAINPAFEDAWSSDED
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgctcagttttctttatgccaggcagtcagggcttgacgatccggttcgtctgagacgt
gcagagtccacacgaagggtcctgagtctggagttgaaccacgacagagatgttgatcgt
atccatggcaacggcattaacagcctggacattgaagctattgaaggaagatatatgtta
tcaggtggatctgatggagtaattgtggtctatgacctggaaaatagcagcaagaaacct
cattacacttgcaaagcaatctgcacagtaggcaggtccagccggtatgttcataaattc
agtgtagaaacagtgcagtggtacccacatgacactggtatgttcgtatccagctcattt
gacaaaaccatgaaagtctgggacacagaaactctgaagccagctgaggagttccagttt
gatggcaatgtctactgccatcacatgtcttctatagctaggaagcactgtcttatagca
gttggtactaaagaccctaaagtgcagctttgtgatctgaagtctgggtctcgcatccac
attctacagggtcacaggggtgagatcctttcagtgagatggtctccacgatatgagcac
atcctggccactgccagcactgacagcagggtccgcgtctgggacgttaggagagctaca
gggagtcttttcactttggatgaacacaatggggacaaatccaaagtctcatctgaagga
gtgaatacagcccacaatgggcgagcgaatggattgtgcttcacagatgacggactttat
ctactcaccacgggcacagacgatcgtatgcggctgtggaatagtgccacgggggagaac
acgctaataaactatggaaaggttgtaaatgagagccggaaaggcctcaagttcaccgta
tcgaagggctgcaacccggagtttgtgtttgtgccatgtgggagctcggtggcagtctat
gggcttcactcgggagagctgatcaccatgctgagaggacattataattatgtagactgt
tgtgagtttcatccagattaccaggaactgtacagtggaggtaaagattgtaacatcctg
gcctgggtcccagtgctaagacagcctgacatggaagatgaaggaagcaacactgcaaag
ggtggaccacaagctgctatcaatcctgcttttgaagatgcttggagcagcgatgaagac
taa

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