Misgurnus anguillicaudatus (oriental weatherfish): 129413942
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Entry
129413942 CDS
T09481
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu00310
Lysine degradation
manu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129413942 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129413942 (prdm2a)
03036 Chromosome and associated proteins [BR:
manu03036
]
129413942 (prdm2a)
Enzymes [BR:
manu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
129413942 (prdm2a)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
129413942 (prdm2a)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
129413942 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_11
zf-C2H2_jaz
zf-C2HE
zf-C2H2_ZNF462_1st
zf-Di19
Motif
Other DBs
NCBI-GeneID:
129413942
NCBI-ProteinID:
XP_055023759
LinkDB
All DBs
Position
13:17222248..17230390
Genome browser
AA seq
1509 aa
AA seq
DB search
MWKANDNLEEERPSKKSADFLMQPEVQSTHSDKATLDSIMEQKEDKVVGGIEGERDEKMD
GKDKQNIQLFQNTSPSVSVVNQSLAHQGQASAATMQQDYRTDMSLNGTKVDLGPDGDVQC
SLKLPCPRCKRRFTSSQGLERHMQTHAQATCHTQQYKCSRCRRTFSTLFSRRRHEKRHDK
RNRNLSNTTSTVGQNVSGSGELLSTNLSSKDDKLLLNPNPGMCNAADSKQKDASSKNNNG
KLSNICKYCKKAFRTHTSLRRHQRRIHERHLLPKVRCKNVTITQESNGQQLGEPAHDSQS
IENISQEREYMVDISSNISENLSFYIDGKIVSTSAVSNCDVLEMNSEGSAVIGLNAVIIS
PAHISHALKLEANTSSLTFDLSGQSSTKRRTSTPPLLPQIKTELESESILSTSSSSLSLS
LYSTSGAALVAAQQPQSTETVALYKEKTVYLSPKLKQLLQNQDGGKPSYALIADGQNLSP
PLSLTVLPASTRFKRRTMSPPSSPQQSLDLSVDNVMTDPDAAETIHSELENPTSPGLSLS
GNDEIGHLNPTTDNSNGLNMEQQVLPLDCSVSRTGGNSCTGGNSCNQQPLDLSNSMGKID
HSEGLAESILDLSIGGKSLDCDLGYLTHPALRKSKPNSNMLQKVLTNECGGVDIPSVDGT
PDITNFAVMALPDSGPTNSENLLFKLAASLQPTPALLAPDNIHSAPSTPPPQDLSSSPPP
FVSFLSTSTVEPSQEVQTLCSTLFVSDTLPPKSTVEDCTDNPVHFSQGNLNVTIPDWVTS
APGGMTHTLIPAAPSLSLQGPQWVSDPALCELAQRTLVVDSLLASDAQIFSPSLSVTQSD
ITSLTFPPNTVVIEYTVALQSTENILPCIQANSVNCLSDNLPVDATVEQDLYVTSPPATL
SPSTTHENSTPMLAAQSSPTEQCSYPTDDTTTLTGSISVVKEESKEEVKDNLVCPANTNV
QTSDYSEQDNKVEDESSPLHPFCKNFMCNVCDRPFQSMKSLSQHVSEHSKEWPYKCEFCV
QLFESDKGLLEHRSSYHGIGKIYVCETCSKEFAFLCNLEQHQRDLHPGQECSHTEVVHGK
LRPENHNNPKTDIYPDLSITEVKQESDNITSKGEKDDLNSTEELYTTIKIMASGAVKPKG
PDVRLGINQHYPSFKPPPFPYHNRTLSGTTAASATNFTTHNIPQTFSTAIRCTKCGNSFD
NMPELHKHILACANASDKKRYTPKKNPIPLKQFAKAQNGVLSPHLMVNSRQNLSQKFGQP
KKLTLHESPVKIKIKIMNRKKSQLVQKGRPAGGRKAFAQNELGSFACPHCSREFTYNASL
KKHVAFSCPMRPANGKCKKRNLIVSVQENNGSLRRQIASAKPHGSIHGPKTLTKSPINQP
IDGTQENRLKRSTILSTSVVQPSKKCKPVLKGSFGPQLASKQIVLSSVAQVNSQEPGIRV
HVLGRKIEQKIGDVKMQPRRDDCLSLRLRERVEGPVTRSVQQASTTTTLLKQSDSHNIIM
RPVVLQVKK
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaagcaaatgacaatttggaagaggagagacctagtaaaaaatcagctgatttt
ctcatgcaacctgaggttcaatctacccactctgacaaagcaacacttgacagcattatg
gagcaaaaagaggataaggtagttggaggcatagagggagaaagagatgaaaagatggat
ggcaaagacaaacagaacatccaattattccagaacaccagcccgtctgtatctgttgta
aatcaaagcctagctcatcaaggtcaagcaagtgctgcaactatgcaacaggattatagg
actgacatgtctttaaatggcactaaagttgaccttggacctgatggtgatgtccagtgt
tcccttaaattgccctgtcctcgttgcaagagacggtttacgagtagtcaaggcctggaa
cgtcacatgcaaactcatgctcaagcaacctgccacacacagcagtataaatgcagtcgc
tgcagaaggaccttcagtacattgtttagtcgccggaggcatgagaaaagacacgacaaa
cgaaacagaaatctctcaaacaccaccagcactgtcggtcagaatgtgtctggcagtggt
gaacttttgagcaccaacctttcatctaaagatgacaagcttctactaaacccaaaccca
ggcatgtgcaatgcagctgatagtaaacagaaggatgcctctagtaaaaacaacaatggc
aaactctcaaacatctgcaagtactgcaaaaaagccttcaggactcataccagtctaagg
agacatcagcgcaggatccatgagcgccatcttcttcctaaagtgcgttgtaagaatgtg
acaatcacacaagaatctaatggacagcagcttggtgaaccagcacatgactcacagtct
atagagaacatcagtcaggaaagggaatacatggttgacatttcaagtaacatttcagag
aatctcagcttctacatagatggcaaaattgtatcgacaagtgctgtaagtaactgcgat
gtgcttgagatgaactctgagggctctgctgtgatagggcttaatgctgttatcataagt
cctgctcatatttcacatgctcttaaattagaagctaatacttccagtttgacctttgac
ctgtctgggcaatcctccaccaaacgcagaacatctaccccacctttactcccacaaata
aaaaccgaattggaatctgaatcaatcttatcaacctcatcgtcgtctttgtccttgtca
ctgtactctacatcaggagctgcactggttgctgctcaacaaccccaatccactgagact
gttgccctttacaaggaaaaaactgtctatctgtctcccaaacttaaacagctcttacag
aaccaggatggtggtaaaccatcatatgcacttattgctgatggccagaacctgagccct
ccattatctttgactgttttacctgcttcaactagatttaagagacggacaatgtcccct
ccaagctctccgcagcaaagccttgatttgagtgtagataatgtcatgacagatcctgat
gctgcagaaaccattcattcagagttggagaaccctacatcccctgggttgagcttatct
ggcaatgatgaaattggacatttgaacccaaccacagacaactctaatggacttaatatg
gagcaacaggttttgccattagactgctctgtatcaagaacgggcgggaactcctgtact
ggtggaaactcctgtaatcaacagccattggatctctccaactctatgggtaagatagac
cacagtgagggcttagcagagtccattttagacttaagtattggtggaaagagcttagat
tgtgacttaggctaccttactcatcctgctttgaggaagagtaaacccaactctaatatg
cttcagaaggttcttacgaatgagtgtggtggtgtagacattccctctgttgatggtact
cctgacataacaaactttgcagttatggcccttcctgattcaggcccaacaaactccgaa
aatcttttgtttaagttagctgcatcactccagccaacccctgctttacttgctcctgac
aatatccactcagctccttcaacccctccacctcaagacctgtcttcttcacctccccct
tttgtgtcttttctgtctacttccacagtggaacccagtcaggaagttcagactctttgc
tccactctctttgtatctgacactttgccacccaaaagcactgtggaagactgcaccgat
aatcctgtacatttctcacagggtaatttaaacgtgacaatccctgactgggtgacctct
gctcctggaggtatgactcacacccttatacctgcagccccttcactgagtttacaaggc
cctcagtgggtctcagatcctgctttatgtgaactagcccaaagaacactggttgtagac
tctttattagcctccgatgcacaaatattttctccctctctgtctgttacccaatcagac
atcacatccttgacttttcctccaaatactgttgtgattgaatatactgttgcactgcaa
tctactgaaaacattttaccatgcattcaagctaattctgttaattgtctctccgacaac
ttacccgtagatgcaacagttgagcaggacctttatgtcacatctccaccagcgacgctc
agtccatccaccactcatgaaaattccactccaatgttagctgcacagtcctcacccaca
gagcagtgttcataccctacagatgacacaactacccttactggctccatcagtgtggtg
aaagaagagagcaaagaagaggtgaaggataacttggtctgtcctgccaatactaatgta
cagacttctgattactctgaacaggacaacaaagttgaagacgagtcatctcccttgcat
ccattttgcaaaaactttatgtgcaatgtttgtgaccgtccctttcagtctatgaagagt
ctcagtcaacatgtaagtgaacactccaaagagtggccttataaatgtgaattttgtgtg
cagttgtttgagagtgacaaaggcttgctggagcaccgttccagttatcatggcattggt
aaaatttatgtctgtgaaacatgctctaaagaatttgctttcctctgcaacttggagcag
catcagcgagatcttcaccccggtcaagagtgttcacacactgaggttgtgcatggcaaa
ttaagacctgaaaatcataacaatcccaaaactgacatctatccagacctttccatcaca
gaagtaaaacaagaatctgacaacataacctcaaaaggagaaaaagatgacttgaattct
acggaagagttgtatacgacaataaaaatcatggcgtctggagcggtcaaaccaaaaggc
ccagatgtacgactaggcattaaccaacattacccgagtttcaaaccgcctccgttcccg
taccacaatcggacactatctgggacgacagcggcatcagctacaaactttaccacccac
aacatccctcagaccttcagcacggccattcgatgcacaaagtgcggcaacagctttgac
aacatgcctgaactgcacaagcacatcttagcttgtgctaatgctagcgacaaaaagcgc
tatactcctaagaaaaaccctataccacttaagcagtttgcaaaagcgcaaaatggggtg
ttatcgccccatttgatggtcaacagtaggcagaatctttctcaaaagtttggacaaccg
aaaaagctaaccctccatgaatcaccagttaaaataaaaataaaaattatgaatagaaag
aaatcacagctggtgcaaaagggcagacctgctggggggagaaaggcctttgctcaaaat
gaactggggtcttttgcatgtcctcactgtagcagggagttcacgtataatgccagctta
aagaaacatgtagcttttagctgccctatgagaccagccaatgggaaatgtaagaaaaga
aacctcattgtttcagtgcaagagaacaacgggagccttcgcaggcaaatcgcaagtgca
aaaccacatggatcaatccacgggccaaaaacattaacaaagagtccgatcaaccagcca
atcgatggcactcaagaaaacaggcttaaaagatctaccatactatcaacatctgttgtt
caacctagtaaaaaatgcaagcctgttttaaaaggcagctttgggccacagcttgcttca
aagcagatcgtcctttcttctgttgctcaggtgaactctcaggaaccgggcattcgggta
catgttttggggagaaaaatcgagcagaaaattggagatgtaaagatgcagcccagaaga
gacgactgtttgtctttaaggttgagggagagggtagaaggaccggttactcgcagtgtg
cagcaggcaagcaccacgacaacactacttaaacagtcggacagtcacaacatcatcatg
cgtcctgttgttctgcaagtcaagaaatga
DBGET
integrated database retrieval system
