Misgurnus anguillicaudatus (oriental weatherfish): 129413947
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Entry
129413947 CDS
T09481
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
129413947 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manu03400
]
129413947 (xpc)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
129413947 (xpc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
129413947
NCBI-ProteinID:
XP_055023763
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Position
5:complement(25561149..25571779)
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AA seq
869 aa
AA seq
DB search
MAKRKDPEQNKDTKKPKQIAKIKQAAKKQKAKENGMMVKNNLKNSKVGPPASKTVKGSSA
GKTSKYFQPKEPEDMMTDHSKELSPVFIEHSPSKHVKEEEAESEDEEDWEEVEEIGDMDS
TELAVTSKPVEIEIETPDMAHKRQKQEKKKAEFETYLRRMMKRFTKEQLEDTHKVHLLCL
LASGLFRNRLCCEPDLTAIAFSILPIHFTTVETKRINIGFVEGLLKWFQRTFTLNPALPE
EKRVELSTVLEKRIGCLSARDHEEMTYLLLLVLRSLRLFCRLVLSLQPLSFKPPSTTKKT
TKPTKSTPTKNQSEKPSPKPKISPGTKRLSVETKEERGGKRRKKTEGGKKEALAGQKPKN
TRRRSVASKVSYKEVNSDEEEEESGEEFQPANEDDSEDSDCEVTNVCRKSKVKLKNLAPQ
RSDEIKQERSEEEEEEEEEEEKEVKKRRSTRKEGKGADEWIEIYLESTGRWVCVDVDQGV
GQPQLCTDQATQPITYVVGIDDEGYMKDISSKYDPTWLTSSRRRRIDSEWWEETMDLYKS
PDADRGQKEDQEMQAKLLDKPLPTSVAEYKNHPLYALERHLLKYEAIYPRTAAVLGYCRG
EPVYSRDCVHVLHSSDTWLKEARTVRLAEEPYKMVLGISNRSRKARMMSEQKDVKDLALF
GLWQTEEYQPPVAVDGKVPRNPFGNVYLFRPCMLPVGCAHLRLPNLHKVARKLNIDCAAA
VTGFDTHCGFAHAVTDGYIVCEEHKDILEAAWENEQDIQQKKEQEKREKRAVANWTLLVK
SLLIKERLKRRYGQQGLASEAGLNQGKEGDAEGLSSDEEEESRAQTAPPSLANSWPQNRQ
EEQEEKIVRRVNKREKREKEKHLFPFEKV
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagaaaagatcctgaacaaaataaggacacaaagaaaccgaagcagattgca
aagatcaaacaagcagccaaaaaacaaaaagccaaagaaaatggcatgatggttaaaaac
aacttaaaaaactccaaagtggggcctcctgcatccaaaaccgtcaaaggttcctctgct
gggaaaacaagtaaatatttccagccgaaggaaccagaggacatgatgacggaccacagt
aaggaattgagccctgtgttcatagagcactcaccatcaaaacatgtgaaagaagaggag
gcagaaagtgaagatgaggaggactgggaggaggtggaagaaataggagatatggactca
acagaactagcagtcacatcaaaacctgtggagattgagatcgagactccagacatggcc
cacaagagacaaaagcaggagaaaaagaaagcagagtttgaaacttacctgcgccgaatg
atgaaacgatttaccaaggagcagctagaggatacacacaaggtccacctgctttgctta
ttggccagcggacttttccggaacagactctgctgtgagcccgacctgacggctattgcc
ttctcaatactgcctatccactttaccacagttgagacaaaacgtataaatataggcttt
gtagaggggcttctgaaatggtttcagaggacattcaccttaaaccccgccttacctgag
gagaagagggtggaactaagcacagtgctggagaagcggattggttgtttatcagcaagg
gaccatgaggagatgacttacctgttattattggtcctgagatcattacgactcttttgc
cgattggtgctgtcactacaacccctgtctttcaagccaccatctaccactaagaaaact
accaaacctaccaaaagcacacctactaaaaatcagtctgagaaaccttccccaaagccg
aagatatcccctgggaccaaacgcctatccgtggagactaaagaggaaaggggtgggaaa
cgtagaaaaaagacagaaggaggcaagaaagaggcactagcaggacaaaaacccaaaaac
accagaagaagaagtgtagcatcaaaggtgtcctataaagaagtcaacagtgatgaggaa
gaggaggagagcggggaggagtttcaacctgccaacgaggatgatagtgaggactctgat
tgtgaggtcacgaacgtttgcagaaagtctaaagtaaagttaaaaaatctggctcctcag
aggtcggatgagatcaaacaggagagaagtgaggaggaggaggaggaagaagaagaggaa
gagaaagaggtaaagaaacgaagatctacacgaaaggagggaaaaggtgcagatgaatgg
atagagatttatttggaaagtaccggtaggtgggtgtgtgttgatgtggatcaaggagtc
gggcagccacagctttgcactgatcaggccacacagccgatcacttacgtggtgggcatt
gacgatgagggatacatgaaagatattagcagcaagtatgaccccacctggctgacatca
tcaaggcgacgacgtatcgactccgaatggtgggaggagactatggatctctacaaatct
ccagatgctgataggggacaaaaggaggaccaggagatgcaggcaaagttattagacaag
cctctgccaacatcagtagctgaatataagaaccacccactgtatgccctagagaggcac
ttgctgaaatacgaggccatttacccccgtacagctgctgtcttgggatactgcagaggg
gaaccggtttactcgcgagactgtgtgcacgtgttgcattccagtgatacctggctgaag
gaagctagaactgttcgactagcagaggaaccgtacaagatggtgcttggtatttccaac
cgttctcgtaaagccaggatgatgtcagagcagaaggatgtaaaagatctggctctcttt
ggactctggcaaacagaggagtatcaacctccagttgccgttgatggcaaagtaccacgt
aatccatttggaaatgtgtacctctttaggccatgtatgttaccagtgggatgtgctcac
ctgcgtttgccaaatctgcacaaagttgctagaaaactaaacatcgactgcgctgcagca
gtaactggcttcgatacccactgtggattcgcacatgctgttactgatggctatatagtc
tgtgaagaacacaaagatattctagaggcagcttgggaaaatgagcaagatatccagcag
aagaaagaacaagagaaacgtgaaaaacgagcagtggctaactggaccctgctggtcaaa
agcctgttgataaaggagaggctgaagcgtcgctatggacaacagggccttgcatcagag
gcggggcttaaccaaggaaaagaaggtgatgctgaagggctgtcttcagacgaagaggaa
gaaagcagggctcagactgcacctccctctctggcaaattcatggccacagaacagacaa
gaagagcaggaagaaaagattgtaaggcgtgtaaataaacgagagaaacgtgagaaggag
aaacatctctttccttttgaaaaagtgtga
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