Misgurnus anguillicaudatus (oriental weatherfish): 129414125
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Entry
129414125 CDS
T09481
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129414125 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
manu03310
]
129414125 (rorca)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129414125 (rorca)
Nuclear receptors [BR:
manu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
129414125 (rorca)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129414125
NCBI-ProteinID:
XP_055024017
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Position
5:30012165..30030526
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AA seq
493 aa
AA seq
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MRGLCTGLYFYILLNNQRSTAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNA
IYSCSRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQ
SQERAGGLGGTAPGSAGEETGDNGSCHARTYSRGSSTTLSDLDDITMLPDGLLFDLPLTP
EEAGDCCSLELLGSSGGSTSSSQSSPEQNRQEFTDAPHIKHEYESGLFSRSLLNLPEGCS
LLEIERITQNVVKSHIETSQYSPEELKRLAWTLYTPEEIRAHQNKSTEILWQQCAVHVTN
AIQYVVEFAKRITGFMDLCQNDQIILLKAGCLDVLLIRTCRVYNPVNNTLLFDGKYASPQ
LFKALGCDDLVSAVFEMAKTLSRLQLSEEEMALFSATVLLSPDRPWLTDSQKVRKLQEKV
YVALQHCLHKGGAPEEKLTKMVSKLPMMKSICNLHIDKLEFFRLLHPETAYNFPALYREV
FCSEITFPDSTEG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcctttgcactggcttgtatttctacattttactgaacaatcaaagatcaaca
gctcaaattgaggtaatcccatgcaagatatgtggagacaagtcatcaggcatccattat
ggagtgatcacttgtgagggttgcaagggcttcttccgtcgaagtcagcagaacaatgca
atatactcctgctcgaggcagaggaactgccttattgaccgaaccaatcgcaaccgctgc
cagcactgccgcctgcagaaatgtcttgcgctgggcatgagtcgcgatgctgtgaagttt
ggccgcatgtccaaaaagcagcgtgacagcctttacgcagaggttcaaaagcaccagcag
tcccaagagcgagctggaggcctgggcggcactgcacccggaagcgctggtgaagaaacc
ggtgacaatggcagctgccacgcccgtacctacagtcggggctccagcactacccttagc
gacctggatgacattaccatgctacccgacgggctgctgttcgatctgccgctcacgcca
gaagaagctggcgactgctgcagcctggagctgttggggagcagcggaggaagcacttca
tcctcccagagttcccctgagcagaacagacaggagtttacagacgcaccgcacatcaaa
cacgagtacgagtcaggacttttctctcgctcgctgcttaatctacctgaaggctgttcc
ttgctggaaattgaacgcatcacacagaacgtggtgaaatcccacattgagacgagtcag
tacagcccagaggaactaaagcgattagcttggaccctctatacgcccgaagagatacgc
gcccatcaaaacaagtccactgaaatactgtggcaacagtgtgccgtgcacgtcaccaac
gccatccagtacgtggtcgagtttgccaagcgtatcactgggttcatggacttgtgtcaa
aatgaccagattatccttctcaaagcaggctgcttggacgtgctattgatccgaacgtgt
cgggtctacaatcccgtcaacaacacgctgttgtttgatggaaagtatgcaagccctcag
ctcttcaaagcactcggttgtgatgatctggtgagtgccgtctttgaaatggctaaaacc
ctgagtcgactacagctgtctgaagaggagatggcattgttttctgccactgtacttctg
tctccagatcgaccttggttgacagatagccagaaggtacgaaagcttcaggagaaggtc
tatgttgcattgcaacactgtcttcataaaggcggcgctcctgaggagaaactgacaaag
atggtgtccaagttacccatgatgaagtctatttgcaaccttcatattgataagttggag
tttttccgcctccttcacccagaaacagcctacaattttcctgctctctacagagaggtt
ttctgcagcgaaatcaccttcccagactccactgagggctaa
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