KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129414207
Entry
129414207         CDS       T09481                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:manu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129414207 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:manu03041]
    129414207 (sf3a1)
Spliceosome [BR:manu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    129414207 (sf3a1)
 Complex B
    129414207 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    129414207 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 129414207
NCBI-ProteinID: XP_073723744
LinkDB
Position
5:complement(16319123..16323918)
AA seq 785 aa
MPPGPVQIVQPEPNNKPDEQKEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPTDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQQASSQQLPQK
VQAQVIHESMVPKEPPPEYEFMADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQR
NYQFDFLRPQHSLFNYFTKLVEQYTKVLIPPKGLLIKLKKEAENPPDVLDQVRHRVEWAK
FQERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPHEQGNFPPPTTPEELGARILIQ
ERYEKFGESEEVEMEVESEDEEDERETRQDGHTSQMDQDTQLQDMDEGSDEDEDGVKAPL
PPDNPLPPPLPPTPDHVIIRRDYDPKASKPQAPVTTSDEYLISPITGERIPASKMQEHMR
IGLLDPRWLEQRDRSIRERQIEEEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGE
EEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDDTKEKIGPSKP
NEMPQQPLLSAAPSMPKPSPPVNTMPGPTPVMAPPVRTTLLPAVPVIPRPPVAPVVRLAP
GQVLAPMPPMLHAPRINVVPMPPPAPHIMAPRPPPMVVPTAFVPAPPVPQPPSSVSAPHP
PSHPPPPHDDEPSSKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLSGQVLN
FNLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMNNGSVIHLALKER
GGRKK
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgtgcagatcgtgcagccggagccaaacaacaagcccgatgagcag
aaagaagagactccagccacgaagcccatcgtgggaatcatctacccacctcctgaagtc
cgaaacattgttgacaagacagctagctttgtggccagaaatggaccagagtttgaagcc
agaattcgacagaatgagatcaacaacccgaaattcaacttcctcaaccctaccgaccct
tatcatgcctactaccgccacaaggtcaatgaattcaaggagggtaaagctcaggaaccg
tccgcagcggtccctaaagtcatgcaacaacaagcatcatcacaacagcttcctcagaag
gttcaagcgcaggttattcatgaaagcatggtacccaaggagcctccacctgagtatgag
ttcatggccgatcctccctccatctccgcctttgatctggatgtggtgaagctgaccgca
cagtttgtcgcccgaaatggtcgtcagtttctgacgcagctgatgcaaaaggagcagagg
aactaccagtttgacttcctgcgacctcagcacagcttgttcaactactttaccaaactg
gtcgagcagtacacaaaggttctgatccccccaaaaggtcttctgataaaattgaagaag
gaagcagagaatcctcctgatgtcctggaccaggtgagacatcgtgtggagtgggccaaa
tttcaggaaagagagcgaaagaaggaagaagaggagcgagagaaggagcgagtggcttat
gctcagatagactggcatgattttgtggtagtggagactgtggactttcagcctcatgaa
cagggtaatttccctcctcctacgacccctgaggaactgggtgctcgtatcttgatccag
gagcgctatgagaagttcggagagagcgaggaggttgagatggaggtagaaagtgaagat
gaagaggatgagagggagaccagacaagatggacatacctctcagatggaccaagacaca
caactgcaggacatggacgagggctctgatgaagatgaagatggtgtgaaggctcctctg
cctcctgataaccctctgccacctcctctgccccccaccccagaccatgttattattcgc
agagattacgaccccaaggcctctaagcctcaagctcctgtcaccacctctgatgaatac
ctcatctcgccaattaccggtgagaggatcccagccagtaagatgcaggagcacatgcgc
atcggactgctggacccgcgctggctggagcagcgtgaccgaagcatccgcgagcgtcag
atcgaggaggaggtgtacgctcccggcctggacatcgagagcagcctgaaacagctggcc
gagagacgtaccgatatcttcggtgtggaagaaacggccattggtaagaagattggagag
gaggagatacagaaaccagaggagaaggtcacatgggatggtcactcgggcagtatggct
cgtacccaacaggcggctcaggctaacatcaccctgcaggagcagattgaggccatccat
aaagctaaaggtctggtgcaagaggacgacaccaaggaaaagatcggtccaagcaagccc
aatgagatgccacagcaacctctgctctcagcagcccccagtatgcccaaacccagccca
ccagtcaacaccatgcctggacccacacctgttatggcgcccccagtgcggaccaccttg
cttccggctgttccggtcataccccgtcccccagtggcccctgtggtgcgtctggccccc
gggcaggttctggcccccatgccgcccatgctgcacgccccccgcatcaatgttgtgccc
atgccaccccccgcaccacacatcatggcacccagacctccacctatggtggttcctact
gcgtttgtacctgctccaccggttcctcaacctcccagtagtgtttccgccccacatcct
ccttctcaccctccacctcctcacgatgatgaaccctccagcaagaagatgaagactgag
gacaacctgattccagaagaagagttcttgcgtaggaacaagggacctgttgcagttaag
gtgcaggtacccaacatgcaagacaagaccgaatggaagctcagtggtcaagtgctcaac
tttaacttgcctctcacagaccaggtgtctgtcatcaaggttaaaattcatgaggccact
ggtatgcctgctggaaaacagaaactgcagtatgagggtattttcatcaaagattccaac
tctctggcttattacaacatgaacaatggatccgtcattcatcttgcccttaaggagaga
ggaggaagaaagaagtag

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