Misgurnus anguillicaudatus (oriental weatherfish): 129414482
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Entry
129414482 CDS
T09481
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
manu01009
]
129414482 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129414482 (hdac6)
04131 Membrane trafficking [BR:
manu04131
]
129414482 (hdac6)
03036 Chromosome and associated proteins [BR:
manu03036
]
129414482 (hdac6)
Enzymes [BR:
manu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129414482 (hdac6)
Protein phosphatases and associated proteins [BR:
manu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129414482 (hdac6)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129414482 (hdac6)
Membrane trafficking [BR:
manu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129414482 (hdac6)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129414482 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
129414482
NCBI-ProteinID:
XP_055024525
LinkDB
All DBs
Position
5:complement(38502051..38518680)
Genome browser
AA seq
1095 aa
AA seq
DB search
MDSVPDLNDSGDSKGSTRSPKGTAENQRNRDDSKKSLQEARRKGKMDRSKAEEEMRSKLQ
NMDVHGKTKASGTGLVYVDAFVRYYCLWDASHPERPERVAVVMDTLDKEGLLSRCIRVEA
RAASEDELLLVHTKEYIDLMRSTQKMAYEELKTLADKYDSVYLHPELFASACLAVGSVLQ
MVDKVMTSQLRNGFCVVRPPGHHAHIDQMNGYCMFNNLAIAARYAQKRHEVERVLIVDWD
VHHGQGIQYIFEQDPSVLYFSVHRYEDGTFWPHLKESVSSSVGSGAGQGYNINLPLNKTG
MEDGDYVAVFQQVLLPVAYEFQPQLVLVAGGFDAVIGDPKGEMRVSPQCFSILTHMLKGL
AQGRLVMSLEGGYNLESTAEGVCASVRSLLGDPCPHLSSPGAPSESALKSISQTILDLYP
FWKSLQTFEGGPLSDVTPHPAPVCAEVQISSTVTGLVYDQKMMLHHNMWDSHHPELPQRI
SRIFSRHEELGLLSRCHRIPARLATEEELALCHSSKHINTIKSTEDMKPRDLHRLGNEYN
SIFISNESYKCALLAAGACFNSVQAILTDQVRNGVAIVRPPGHHAEKDKACGFCFFNTAA
VTARYAQSITNQSLRVLILDWDVHHGNGTQHMFEEDNSVLYISLHRYEDATFFPNSEDAD
YDQVGRGKGKGYNVNIPWNAGKMGDAEYLAAFHYLVMPIAREFAPDLVLVSAGFDAARGD
PLGGYQVTPEGYAHLTHKLMSLAAGRVLVILEGGYNLNSISESMSMCTSMLLGDSPPALP
DLSHLHPNAAVTINNVLRAHAPYWSSLRIQLPESLRLSLPSPKPKGKRTSVGKSKKSPRQ
SNPAQSPRHQTPQHHSTPPSAALDDLTEGMLSLDLNTSVSSNPSPASVPIGGARRKVKPQ
RESSGQMSDSPVKLSADNTKDKDDTNAETAAVTAEAPMLKAEATVDSGAVEDQEPSAPQG
ACGYTEKSVFELVCGAQDTDGETMYVVDPLSWCPHLESVRPVPAGGIDVFLPCEECGGDA
ENWICLFCYKVLCGRYVNQHMVTHGQVSGHPLVLSFADLSVWCYACESYIHNQVLYEVKN
AAHLVKFGEEMAPFS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtaccagatctaaatgattcgggtgactccaaaggttccactcgatctcca
aaagggacagcagagaaccaaagaaatagagacgacagcaagaagagcctacaggaggca
cgcaggaaggggaaaatggatcgaagtaaagcagaggaagagatgcgcagtaaactccaa
aacatggatgtgcatggtaaaactaaagcatcaggaaccggtcttgtctacgtggatgcg
tttgttcgctattactgcctctgggatgccagtcaccctgagcgtcctgagagagttgct
gttgtaatggatacgctggataaagaggggttgctgtcgcgatgcattcgggtcgaggcc
agagcagcgtcggaagatgagctgttactcgttcatacgaaggagtacatagacctgatg
agatccacacagaaaatggcgtacgaagaactgaagacccttgctgataaatatgactct
gtctatctgcatcccgaacttttcgcttcagcttgtttggcggtgggatcggttctccag
atggtggataaggtgatgacatcacaactacgtaacggcttttgtgtcgtcaggcctcca
ggacatcatgctcacatcgatcagatgaacggttactgtatgtttaataatctggccata
gctgcacgctacgctcaaaaacggcacgaagtggaacgagttttgattgtggattgggac
gtgcatcacggacagggaatccagtatatttttgaacaggatcccagtgtgctgtatttc
tcagtgcacagatatgaagacggtacattttggccgcacctcaaagagtcggtgagcagc
tctgtaggttcaggagcgggacagggctacaacatcaatctacccttgaacaagacagga
atggaagatggagactatgtggcggttttccagcaggtcctcctgcctgtggcgtatgag
tttcagcctcagctggtgttagtggcaggaggttttgatgctgtgatcggagacccaaag
ggtgagatgcgagtgagtccgcagtgtttctctattctgacccacatgctgaaaggcctc
gctcaggggcgtctcgtgatgtctttggagggtggatataacctggagtctactgccgag
ggtgtttgtgcgtctgtgaggtcacttctgggtgacccttgccctcacctgtcctcacct
ggtgccccgagcgaaagtgcactgaaatccatctctcagaccatcttagacttgtatcca
ttctggaagagtcttcagacgtttgagggcggtcctctatctgatgtcacgccccatccc
gctccagtttgtgcagaggtgcagatttcttccactgtcaccggattggtttatgaccag
aaaatgatgctccatcacaacatgtgggatagtcatcacccagagctccctcaaaggatt
tcccgaatcttttctcgtcacgaggagttgggactgctctcacgttgccatcggataccg
gctcgcttagcaacagaagaagagcttgcactttgccatagttctaagcacatcaacact
ataaagagcacagaagacatgaaacccagagatcttcaccgactggggaacgagtataac
tcaattttcatcagtaatgagagttataaatgtgccctgttggcagccggtgcctgtttt
aactccgtgcaggccattctcacagaccaggtgagaaacggtgtggctatagttcgtcct
cctggtcatcatgcagagaaagacaaagcctgtggcttttgcttctttaacacggctgct
gtgacggcacgctacgcccagagcatcaccaaccaatccctgcgtgtccttatcctcgac
tgggatgtgcaccatggaaacggcacccagcacatgtttgaggaggacaacagtgtgcta
tacatctccctgcatcgctacgaggatgcaacgttcttccccaactcagaggatgctgac
tatgatcaggtgggacgggggaaaggtaaaggctacaatgtcaacattccctggaacgct
ggaaagatgggagatgccgagtaccttgcagctttccattatctagtgatgccgatagcc
agagagtttgctccagatctggtgctggtgtctgctgggtttgacgcggcgcggggcgat
ccgttaggggggtatcaggtcaccccagagggttacgctcatctcacccacaagttaatg
agtctggcagcaggaagagtgcttgtcatactagagggaggatataacctcaactccatc
tctgaatccatgtccatgtgcaccagtatgttacttggtgattcccctcctgctctgcct
gacctgtctcatctccaccccaacgccgctgtcaccattaataatgtcctgcgtgctcac
gccccctactggagctcgctgagaatacagcttccagagtctctccgtttgtctttgccg
tctcctaaaccaaaaggcaagcggacgtcagttggtaaaagtaagaaatctcctcgtcag
tccaatcctgctcagagtcccagacatcagacaccgcagcatcactcgactccgccctct
gccgccctcgatgacctcactgagggcatgctgtctttggatctcaacacgagtgtctcg
tctaaccccagcccggcgtcggttcccatcggtggagccagacgtaaagtaaaaccacag
agggaatcatcaggccagatgtcagattcacccgtgaagctgtctgcagacaacaccaaa
gataaagatgacacaaatgcagaaactgctgccgtgacagcagaagcacctatgctgaag
gctgaggccacggttgattcaggtgctgtggaggaccaagagccttctgcaccgcaggga
gcttgtggttacacagaaaaatctgtgtttgagctcgtgtgtggagcacaagacacggac
ggggagacgatgtacgtggtggatccgttgtcatggtgcccacacttggagtctgtgcgg
cccgtgcctgcaggtggcatcgacgtcttcctcccgtgtgaagagtgtggtggggacgct
gagaactggatctgtctcttttgctacaaggtgctctgcgggcgttacgtaaaccagcac
atggtgacacacgggcaggtgtcaggtcatcctctggtcctgagctttgctgacctttca
gtctggtgctacgcctgtgagtcgtacatccataaccaggtgctctatgaagtcaaaaac
gctgctcatcttgtaaagtttggagaggagatggctcctttcagctaa
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