Misgurnus anguillicaudatus (oriental weatherfish): 129414785
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Entry
129414785 CDS
T09481
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
manu03036
]
129414785 (smarcad1a)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129414785 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
CUE
ERCC3_RAD25_C
DEAD
Motif
Other DBs
NCBI-GeneID:
129414785
NCBI-ProteinID:
XP_055024873
LinkDB
All DBs
Position
13:19179358..19190697
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AA seq
958 aa
AA seq
DB search
MSLFNLERFRFQKDKAADGRSKSSDRSSSDKENHRGCVTGKLQKHGLDDVSSDDKAVRMG
KDSLSKDVEDKVSKLMEMFPQKSKKDLLAVVESTSTLEGAVAHCLLVCGEKDSDRQKGKT
RHNEDDENAQPMKRRKITRSDTEDEEDSEEEENQEPSREKQEALLRKLKKKIPDFEKELL
RDVLREHDWDYENALGSLLMFSSTDSSSPEDQRKPKAKSSHSEVKNAKSLQKPESSSSLS
RWLTAAPSPVRNISTPSTPKTHKVASSNNTIKNDSFKRKRENDLRVDNISASEGEEEEEL
DSEVDSASDDLESDDEDDIAPHLQDQIIQFLQEASLDELVLISLCSVKKAQRIISLRPFN
SWKDVKEQFFKDNGLSIDLVHGCKVVLKERQVVRDLMGRCEKIAQKMTKDVTQVIEAGMG
SMKQPKVLNSKFHLQPYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLAHLYEKG
IKGPHLITVPSSTLDNWVRELGLWCPSLKVLVYYGSVEDRRYLRQEILSNLIDFNIIVST
YNLTIGNDHDRSLFRKLKLKYAIFDEGHMLKNMKSLRYRHLMTINAEHRLLLTGTPLQNN
LLELMSLLNFIMPSMFSSSNSQISKMFSTRSSEDESSFHKERIAQAKLIMKPFILRRVKR
DVLKELPPKVEKIEMCPMSEAQQKLYEKLFKKLKRTPSGEKQELCNVMMQLRKMANHPLL
HRQYYTSEKLALMSQAMLKEPTHFDADPALIQEDMEVMSDFELHNLCKEYTSISTFQLEK
KLILDSGKFALLTKLLAKLKENGDRVVLFSQFTMVLDIVEILLKHLDHQFVRLDGSTPMA
ERIGLIDKYNTNPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCHRMG
QTRTVQVIKLISKDSIEACMLRVGQEKLKLEQDMTTDEGEDGAMTEQMAELLKVSLGL
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtttaacctcgagcggttccgtttccaaaaggacaaagctgctgatggtcgc
agtaagtcgtcggatagatccagctcggataaagagaatcacagagggtgtgttacaggc
aaattacagaaacatggactggatgatgtttcttccgatgacaaagctgtcaggatgggc
aaggattctctgtcaaaggacgtggaggacaaagtgtccaaactaatggaaatgttccct
cagaagagcaagaaagatctgctggcggtggttgagagtaccagcacactggagggagca
gtagcacattgtttgttagtgtgtggtgagaaagattcagacaggcagaaaggcaaaacc
agacataatgaagatgatgaaaacgctcagccgatgaagagaagaaaaatcacacggtca
gatactgaggatgaagaagactctgaagaagaggaaaaccaggagccaagcagagagaag
caggaagctctcctgaggaagctcaagaaaaaaatacctgattttgaaaaggagctcctg
agagacgtccttagagagcatgactgggactatgagaatgccctgggatcattgctaatg
ttttcctcaacagattccagttcaccagaggatcaaagaaaaccaaaagccaaatcgtct
cactccgaagtaaaaaatgccaagagcttgcagaagccagaaagttcgtctagtctttca
agatggttgacagcagctccgtcaccagtgcgaaacatctccactccgtctactcccaaa
acgcacaaagtggcgagtagcaacaacacgatcaaaaacgactcctttaaacggaaaagg
gaaaatgatttgcgagtagacaacataagtgcctctgagggggaggaggaggaggagctg
gacagcgaggttgatagcgcctctgatgacctggagtctgatgatgaagatgacatcgct
cctcatctccaagaccagatcattcagttccttcaagaggcttctctagatgagcttgtt
ctgatatctctctgctcagtcaaaaaagctcaaaggataatttctttgaggccttttaac
tcttggaaggatgtgaaagagcagttttttaaggataatggcctgtctatagacctggta
catggctgcaaggtggtactgaaagagaggcaggtggtcagagacctcatgggcagatgt
gagaagatcgcacagaaaatgacaaaagatgtcacacaggtcatagaagcaggcatgggc
tctatgaagcaacccaaagtcctaaacagcaaatttcatttgcagccgtatcagctgatt
ggcttgaagtggctgattctgctccaccagcacaagctcagtgggattctggcagatgaa
atggggcttggtaagactattcaggccatcgctttcctggctcatctgtatgaaaaaggc
attaaagggcctcatcttataactgtgccttcatccactttagataattgggttcgtgag
cttggtctttggtgccccagtctgaaagttctcgtttactacgggtcagtggaagaccgc
agatacttgcggcaagagatcctcagcaatctaattgatttcaacatcatagtgtccaca
tacaatctcacgataggaaacgaccatgaccgcagtctcttccgcaaactgaagctcaaa
tatgcgatatttgacgagggccacatgctgaaaaatatgaaatcgctgcgataccgccac
ctcatgaccatcaatgctgagcaccgtttactgctaactggaacacctttgcagaacaac
ctgttagagctcatgtccctgttgaacttcatcatgccttccatgttctccagcagcaat
tcacagatctccaagatgttctccacgagatcatcagaagacgagagcagctttcacaag
gagagaatcgcacaggctaaacttatcatgaagccatttatcctgagacgagtcaagcgt
gatgtgttaaaagagcttccaccaaaagtggagaagattgaaatgtgtcccatgagtgag
gcccagcagaagctatatgagaagctttttaagaagctgaaaaggactccaagtggagag
aagcaagaactttgcaatgtgatgatgcagctgagaaagatggccaatcatccgttacta
caccgtcagtattacactagtgaaaaattggctctcatgagtcaagccatgcttaaggaa
ccaacgcactttgatgccgaccctgcacttatccaagaggatatggaggtgatgtctgac
tttgaactgcataatttatgcaaggaatacacctccatcagcacttttcagctggagaaa
aagctaattttagactctgggaagtttgcgctgctaacaaagctacttgccaagctcaaa
gaaaatggtgacagggttgtgctgttcagtcagttcaccatggttttagacattgtggag
atcctgctaaaacaccttgatcatcagtttgttcggctggatggctctactcccatggcg
gagaggattggccttatcgacaaatataacacaaacccagagatctttgtgttccttttg
tcaacccgtgccggaggccagggaatcaacctcgcctctgctaacaccgtgatcctgcac
gacattgactgtaatccatttaatgacaagcaagcagaggaccgctgtcatcgaatgggg
cagaccagaacagtgcaggtgatcaagctcatcagcaaggactcgattgaggcctgcatg
cttcgtgtgggacaggagaaactgaaactagagcaggacatgaccactgatgagggtgaa
gatggagctatgactgaacaaatggctgagctgctcaaagtctcactgggtttataa
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