Misgurnus anguillicaudatus (oriental weatherfish): 129414878
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Entry
129414878 CDS
T09481
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129414878 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129414878 (lsm1)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129414878 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
129414878 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
129414878
NCBI-ProteinID:
XP_055024976
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All DBs
Position
5:complement(15220043..15228312)
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AA seq
133 aa
AA seq
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MNYMPGTASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIP
RGIFVVRGENVVLLGEVDLDKECDQILQRVSIEEILEEQRTEQQAKQESERLKLQAVKER
GLSIPKADTLDDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccagggactgcaagcctcatcgaggatattgataaaaaacatctcgtt
ctccttcgcgatggaagaacgttgattgggatcctcagaagcatagatcagtttgccaat
ttagttttgcatcaaacggttgaacgcatccatgtaggtaaaaaatttggcgacatacct
cgtgggatatttgtcgtcagaggagaaaatgttgtcttgctgggagaagtagatttggat
aaagaatgtgatcagattctccagagagtttctattgaggaaatactggaggaacagagg
acagaacaacaagccaagcaggagtccgagagactaaagctacaggctgtaaaagagcgg
gggttatcaatccctaaagctgacacactagatgatttctga
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