Misgurnus anguillicaudatus (oriental weatherfish): 129415103
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Entry
129415103 CDS
T09481
Symbol
hcfc1b
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1b
KO
K14966
host cell factor 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03083
Polycomb repressive complex
manu04980
Cobalamin transport and metabolism
manu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129415103 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
129415103 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129415103 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
manu01009
]
129415103 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
manu03036
]
129415103 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
manu03029
]
129415103 (hcfc1b)
Protein phosphatases and associated proteins [BR:
manu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129415103 (hcfc1b)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
129415103 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
129415103 (hcfc1b)
MLL-HCF complex
129415103 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
129415103 (hcfc1b)
Mitochondrial biogenesis [BR:
manu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
129415103 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
129415103
NCBI-ProteinID:
XP_055025248
LinkDB
All DBs
Position
13:3218016..3237422
Genome browser
AA seq
1991 aa
AA seq
DB search
MASSGTKASGPAVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHV
YNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWK
RLKPKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPG
SNIAGWDIPITYGVLPPPRESHTAVVYTEKTSKKSRLIIYGGMSGCRLGDLWTLDIDTLT
WNKPTISGTAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNL
DTMCWETILMDTLEDNIPRARAGHCSVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYLET
DRPLPPSRVQLVRANTNSLEVSWGAVPTADTYLLQLQKYDIPAATAATSPTVTPSLPVNS
PKSPVPAAAAPAAQSMPLSGVTLVPQSPSPTTSIPGSPLAASPRGPAILKVAAPHSTTGA
SLVTVRQATPGAKSPVTVTSLPAGVRMVVPAQSTQGTPIGSSPQMSGMAALAAAAAATQK
IPPSSGTTVLNVPAGATIMKTVAVTPGSTTLPATVKVASPVMVTNPATRMLKTAAAQVGT
SAISTPNTPTRPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPITMGSGGTLLSS
LGKMMSVVQTKPVQTSSVTGQAGNSPVTLIQTKTPLPAGTILKLVTSADGKPTTIITTSQ
AGGTGTKPTILGISSVSPNTANKPGTTYIKTIPMSALQQGATGVTSSGGIKSPITIITTK
MVTPGTGTPGKIITAMPKLTGTGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVSPGTVS
AGKPTVTTLVVKGTTGMTTLGTVTNTASSSVVGANASLATPATTLSTIATLSNQVPAAIT
VPAAQTSLTTATIQSAPQPTTVTLITTPSGAEAQPAPDLPVSILASPTSDQPSNTGDGAG
DGTATVTLVCSNPPCETHETGTTNTATTAAAKICSNPPCETHVTGTTNTATTASANMGAV
QQVCTNPPSETHDTGTTNTATTASCNMGSTEMGTVDSKPGASTSGESTASGTDPAESAAE
NSSASGSVRPENARTGTTNTSTTARSNMGSDQTGTVQSSSKSQAAISSTVLPLSTSPSCE
TLETSTPDASSDVEGIKQVCSEPPSETHETGTTNTATQSTSTMSSGEANVVQKVCSNPPC
ETHETGTTNTPTQASSPSGAGQDGTVQTVCSNPPCETHETGTTNTPTQSSSTMSAGQNDT
VQRVCSNPPCETHETGTTNTPTQSSSTMGAGQNGTVQRVCSNPPCETHETGTTNTPTQSS
STMGAGQNGTVQRVCSNPPCETHETGTTNTPTQSSSSIGADENGTVQRVCSNPPCETHET
GTTNTATTATSSLETGDGAAEQGGEGQVDSGTSSEPTSSTEPVNPATQSRAITTVTQATP
TPGPAVPEISSMAGSAVVAEVPEVPGEAEAMDQTSAEAVAAEQEPMQTECQGELGEETAI
RVVAIDEGAAADEGTVLQVHVAMEAQPGQGDQAEQMDAGVEGTEAMSLAPQDSEALALPQ
ELMSAEGQQTTLMVTGLTPEELAVTAAAEAAAQAAASEEAQALAIQAVLQAAQQAVLSGD
AGHDQQPTTIPIVLTQQELAALVQQQQQLQEAQAAAAQQLSAEAAAAALPTEGLAPADSL
NDPASESNGHEMAAAVTATVARLLPRASAETLAPSITFAPSQPLVVASPAKMQAATALTE
VANGIESAAGKQDAPPVVVKPPVKKENQWFDVGIVKVTNMVVTHYYVPADDSAVTDDDSG
TVPDYSKMKKIELSPGTAYKFRVAGVNACGRGTFSEVSAFKTCLPGFPGAPCAIKISKSP
DGAHLTWEPPSVTSGKIIEYSVYLAIQSSQTVEAKVSAPAQLAFMRVYCGPNPSCLVQSS
SLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDGSAAKPAAKRPVSSPDMK
GTGPKKARSDQ
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcaggcaccaaggcctctggacctgcggttctgcagccgcgctggaagaga
gttctgggctggtccggcccggttcctcgcccgagacacggacatcgagctgtggccatt
aaagaattgatggtggtattcggcggagggaatgaagggattgtggatgagctgcacgtc
tataacacagccaccaatcagtggtttattcctgctgtccggggtgacattcctcctgga
tgtgccgcttatgggttcgtttgcgatggcaccagacttctggtattcgggggtatggtc
gagtatggaaagtacagcaacgacctttatgaactacaggcaagtagatgggagtggaaa
cggttaaagcccaaagctcctaaaaatggaccgccaccatgtccccgtctgggtcacagt
ttttctcttgttggaaacaaatgttatctgtttggtggactggctaatgacagtgaggat
cccaaaaacaatattccaagatacctaaatgacttgtacacactggagctgcgcccaggg
tcaaacatagcaggctgggacatccccattacatacggtgtcctgccgcctccgcgtgag
agccacactgccgttgtctacacagagaaaacgtccaagaagtctcgcctcatcatctac
ggtggtatgagtggatgccgccttggagacctctggactttagacatagatactttgacc
tggaacaaaccgactataagtggtacagctcctctgccccggagtctccattctgccacc
actataaccaacaagatgtttgtgtttggtggatgggttcctcttgttatggatgatgtc
aaagtggcaacacatgagaaggaatggaaatgcactaacacattggcatgcttaaatcta
gacacaatgtgttgggaaactatcttgatggacacattagaggataatatcccaagagcg
agagctggacactgttctgtagctattaacaacaggctatacgtctggagtggcagggat
ggctaccgaaaagcctggaacaaccaagtttgctgcaaggatctgtggtatctggagaca
gatcgccctctgccaccgtcacgagtccagttggtccgtgccaacacaaactctcttgag
gtgagctggggggcagtgcccactgctgacacgtacctgctacagctgcaaaaatatgac
atccctgctgcgaccgctgccacttctccgactgtcaccccttctctacctgtcaactcg
cccaagagtcctgtgcccgcagctgctgcgcctgcagctcaaagcatgcccctgtctggg
gtcacgctggtgccacaaagtccttcacccaccacctccattccaggcagcccgctagca
gcttcacctcgtggaccagctattcttaaagtggcagcacctcattcaacaactggggct
tcactggttactgtgcgtcaggcaaccccaggggccaaatccccagtcacagttacatca
cttcctgctggagttcgcatggttgtcccagcacagagcacccagggaacaccaattggc
agcagccctcagatgagtggcatggctgctttggctgcagcggcagctgccacgcagaag
atcccgccctcttccggaaccactgtgctaaatgttccagcaggagccaccattatgaaa
actgttgctgtgactccaggatccacaactttgccggctactgtcaaagtagcttcgcct
gttatggttaccaaccctgctaccaggatgctaaaaacagcagcagcccaggttggcact
tcagctatctctacgcccaacacccctactcggcccatcatcaccgtacacaaatctggc
acagtgactgtggctcagcaggcccaggttgtcaccactatggttggaggagtcaccaaa
accataaccctggttaaaagcccaatcactatgggtagcggtggcactttgctctccagc
cttgggaagatgatgtctgtggttcagaccaaaccagtacaaacctcttctgtgactggg
caggctggaaacagtcctgtcactctaatacagacaaagactcctctgcccgctggtacc
attctgaagctggtgacatctgcagatggcaagcccacaaccatcattacaacatcccag
gcagggggaaccggcaccaagccaactatcctgggcatcagcagcgtctctccgaacaca
gccaacaaaccaggcacaacctatattaaaaccattcccatgtctgcccttcagcaaggg
gcaacaggtgtgaccagcagtggtggcatcaagtctcccatcacgattatcaccaccaag
atggtcactcctggcacgggcacaccaggcaaaatcataaccgctatgcctaagctgacg
ggtacaggacaacagggggtcacgcaggtggtcttgaagggggcaccggggcaaccaggc
accatcctgcgcacagttcccatgggtggagtgcggctagtttcaccgggcactgtgtca
gctgggaaaccaactgttacgacacttgtcgtcaagggcaccacgggtatgacaactctg
ggtacagtgaccaacaccgcatcctccagcgtggtgggtgccaacgccagccttgcaact
cctgccaccaccctttccacaattgctacgctgtccaaccaagttcctgcagctatcact
gtacctgctgcacagaccagcctcaccaccgccacaatacaatctgctccacagcctact
acagttactttgatcacaacaccaagtggtgctgaggcccagcccgcaccggaccttcct
gtttccatcctggcatcacccacctccgaccagccctccaacactggtgatggtgctggc
gatggtactgctaccgtgactttggtctgctctaacccaccgtgtgagacccatgagacc
ggaacgaccaacactgctacgactgctgctgccaagatttgttccaaccctccgtgcgaa
acgcacgtaacgggcactaccaacacagccacgaccgcctcggccaacatgggtgctgta
cagcaggtgtgcaccaacccaccttcagagacccatgacacgggcactaccaacacggcc
accactgccagctgcaatatgggctctacagaaatgggcacagttgacagcaaaccaggg
gcttctacgtcaggtgagtccacagcttctggtacggacccagctgaatccgccgcagag
aacagttctgcatctggctccgtgcgtcctgagaatgcccgcacgggaaccaccaacacc
tccaccactgcccgttcaaatatgggttctgatcagacaggaacagttcagagctccagc
aagagccaagctgcaatttcttccacggttttgcctctctctaccagcccttcctgtgag
acgcttgagaccagcaccccagatgcttcatctgatgtagaaggtattaaacaggtctgt
tcagaaccaccttctgagacacatgaaacgggcacaaccaatactgctacacaatcaacc
tctactatgagcagtggggaggccaatgtggtgcaaaaggtgtgctccaatccgccctgt
gagacccacgagacgggcactaccaacacgccgacccaagcttcatctccaagtggtgct
ggacaagatggcactgtgcaaacggtgtgctccaatccaccctgtgaaacccacgagact
ggcactaccaacacgcccacccaatcctcatctactatgagcgctggacaaaatgacact
gtgcaaagggtgtgctccaatccaccctgtgaaacccacgagactggcactaccaatacg
cccacccaatcctcatctactatgggcgcgggacaaaatggcactgtgcaaagggtgtgc
tccaatccaccctgtgaaacccacgagactggcactaccaatacgcccacccaatcctca
tctactatgggcgctggacaaaatggcactgtgcaaagggtgtgctccaatccaccctgt
gaaacccacgagacgggcactaccaacacgccgactcaatcctcatcttctatcggtgcc
gatgagaatggcaccgtgcaaagagtgtgctccaatccgccctgtgaaacccatgagacg
gggactacaaatacagccactacggctaccagcagcttagaaactggagatggagcagct
gaacagggtggtgagggacaggttgacagtggaaccagttcagaacccacatcctctaca
gaaccagtcaatcctgcaacacaaagcagggccatcaccacagtgacgcaggccacgccc
actccaggaccagcagtaccggagatctcatccatggccggttcagcagttgtggctgag
gttcccgaggttccaggtgaggcagaggccatggatcagacaagtgctgaggctgtagca
gccgaacaggagccaatgcagacagagtgccagggagaactgggtgaagaaacagccatc
agggtggttgccatagacgaaggtgcagcggctgatgagggcaccgtgctacaggttcat
gtcgccatggaagcgcaaccaggtcaaggagaccaggctgagcagatggatgctggtgtg
gagggcacagaagcgatgagtctcgcacctcaggactctgaagctctcgctttaccccag
gagctgatgtctgcagaaggtcagcaaaccaccctcatggtgaccggactgaccccagag
gagctggctgtgactgcagctgcggaggctgcggcgcaggcagccgcttcagaagaagcc
caggccctcgccatccaggctgtactacaggcagctcaacaggctgtgctcagtggagat
gcaggacatgaccagcagccaaccaccatccccatcgtcctgacgcagcaggaacttgca
gctctcgttcagcagcagcaacagttgcaggaggcgcaggcggcagcggcccaacagttg
agtgccgaagcggctgcggctgcactgcccaccgaaggtttagctccggcagacagcctc
aacgacccggcgtctgagagcaacggtcacgagatggcagccgctgttacagcaactgtg
gctcgtcttttaccacgcgcttctgctgaaactctggccccgtcgattactttcgcacca
tcccagccgttggtggtcgccagccctgccaagatgcaagcagccacagctttgaccgag
gtggccaatggaatcgagtctgcagctgggaagcaagatgcccctccggttgtggtgaag
ccgccggtgaagaaagagaatcagtggtttgacgttggaatcgtcaaagtgacaaacatg
gttgtcacgcactattatgtgccggcagacgattctgcagttactgatgatgattctggt
acggtgccggactacagcaagatgaagaagatcgaattgtctcctggcacagcgtacaag
tttcgtgtagcaggcgtcaatgcgtgcggccgtggaacgttctccgaggtctccgcgttt
aagacctgcttacccggcttccccggagcaccgtgtgccatcaaaatcagcaagagccct
gatggtgcccatctgacctgggagcctccttcagtcacatcagggaagatcatcgagtac
tcggtgtatctggccatccagagctcacagacagtcgaggcgaaagtgtctgctccggcg
cagctcgcctttatgcgggtgtactgtggacctaacccatcgtgtctggtccagtcatct
agcctctccaacgcccacatcgactacaccaccaaacccgccatcatcttccgcattgct
gcacgtaatgagaagggttatggccccgccacgcaagtcaggtggcttcaagaaaccagt
aaagatggctcggcagccaaaccagcagcaaagagaccagtctcgtcacctgatatgaaa
ggcactggtccaaagaaagccagatctgaccagtga
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