Misgurnus anguillicaudatus (oriental weatherfish): 129415392
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Entry
129415392 CDS
T09481
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129415392 (zswim8)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
129415392 (zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
129415392
NCBI-ProteinID:
XP_055025334
LinkDB
All DBs
Position
14:complement(20080034..20127276)
Genome browser
AA seq
1922 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRMRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTHEQIIGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASMCDEMVVLWRLA
VLDPTMSPQRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVECCYFNWEVAY
PLPGITYCSADKKNTSFCWTRTAQQRRGAKAGTTGDPQEPGGGSRSVTSEASSSEQKSRS
GSHPPQQEVAVRPKETIVSKRKGVSVVNTGGVLVRLGGGVSLSLEDGGKSMYKASGSSPS
TSSKAKLTQTSKGSCGSSSGVSGKHPSAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEA
SNTFDFLPPPPEMLPSPSPLLREPRKFNSGNVSKDRPFETKRATHASVPSAADAHACFSK
ETSMSAPAVVAMEKEVEVEADLDENGGDEDPVEDAPGKAQRSRREGDGSGASPGPQAAEA
AAAGSGDAVGDDDYQAYYLSAASEEGAERGVADSNHEEEPDIFAGMKPLEQEGRMEILFA
CVEALYAHGYSNDACRLAVELARDLLANPPDLKVEQPQTKGKKSKVSTTKQTQVATNTLS
KVAFLLTVLSERLELHNLAFNTGMFSLELQRPPASTKALEVKLAYQESEVVALLKKIPLG
VVEMTSIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNEMP
GDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDK
LLDRESQTHKPQTLSSFYSSKPATSSQKSPSKHATHGASGATGGVSKHAPSAAVQGVSGG
GATGQQGGVTGVQSSEGIGENRDQEGVQSSSCEQQSETAPFKPEGTVPSRLALGGRGAYS
TRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWTAASWGRGQDSDSISS
SSSDSLGSSSSSGSRRAGGGARAKSTDTSRYKGRRPECHAPHVPNQPSEAAAHFYFELAK
TVLIKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSS
HVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMVRAAAELALSCL
PHAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQ
TVGGGSGSQREGSGRCGANGGIGRTPPEGSCGILDNPGVMDPSGVAAVTTTVTAAAVVPV
ISVGSTIYQSHALPGSAMAHAQGLHPYTTIQTHLPTVCTPQYLGHPLQHVPRPAVFPVSG
AAFPQGMHPAFIGAQFPFSVATGPHPPMAATAVTFPGVPVPSMTQIAVHPYHAAEAGLPL
STAVADERLCRPFTLMDSYITHCSKAGGAIQAASLPGLSSQPASLVSAPFPVEDEQHSQP
ISQQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNHV
YQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHR
LIHLTPADYDDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATF
SP
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgttcgctgagtgggaagacggagagaggttctcctttgaagactcggac
cggtttgaggaggactccctgtgctcattcatatcagaggctgaaagtctctgccagaac
tggaggggatggaggaagcagtctgctggtccaaattcacccactgtgaagattaaagat
ggacaagtcatccctctggtggagctgtcagccaagcaggtggctttccatattccattt
gaggtggtggaaaaggtctatccacctgttcccgagcagctgcaattacggatcgcatac
tggagcttcccagagaacgaggaggacatcagattatactcgtgtctggccaacggcagc
cctgatgagtttcagcgtggtgagcagctctacaggatgagagctgtgaaagatcctctg
cagataggtttccacctcagtgccacagtagtgtcaccccaggctggccaatcaaaagga
gcctacaatgtggccgtaatgtttgaccgctgccgcatcacttcctgcagctgcacctgt
ggagcaggagccaaatggtgtgctcacgttgtggctctctgcctcttcagaattcacaat
gcatctgcggtttgtctccgagcacctgtgtcagagtccctatctagattacagcgggat
caacttcaaaagtttgcacaatacctcatcagtgaactcccacaacagatcttaccgaca
gctcagcgtcttctggatgagcttctttcttcacagtctactgctattaacactgtgtgt
ggagccccagatcctaccgctggcccttcagcctctgaccagagtacttggtatttagat
gagtccacccttagtgacaacattaagaagaccctgcacaagttctgtggcccatcacct
gtggtgtttagtgatgtgaactccatgtatctctcatccactgagcctcccgcagctgct
gaatgggcttgtctgctaaggcccctgagaggaagagaaccagagggcatctggaacctt
ctgtccatcgtcagagagatgtttaagaggagggacagtaatgcagctcctctgttagag
atcctcaccgaacaatgtctcacacatgaacagattattggttggtggtatagtgtgagg
acatctgcctctcacagtagcgccagtgggcacacaggccgcagtaatggtcagacagag
gtggcagcgcatgcttgtgccagtatgtgtgatgagatggtggtcttatggagactggca
gtgctagatcctactatgagtcctcagaggcgtttagaacttgctgcccagctaaagcag
tggcacctaaaggttatagagatagtgaaacggggacaacaccgcaagtccctggacaaa
ctcttccagggcttcaaaccagcggtggaatgctgctacttcaactgggaagtcgcctac
cctttgcctggcatcacctattgcagtgcagataagaaaaatacctcgttttgttggacc
aggacagctcagcagcgccgaggtgctaaagctgggactaccggggaccctcaagaaccc
ggaggaggaagtcgcagtgtaacgtcagaagccagctcctccgaacagaagtcacggagc
ggctcccaccctccccagcaggaggtggctgtccgcccaaaagagaccatcgtgagcaag
agaaagggcgtttccgtggtcaacaccggtggcgtgctggttcgtctgggtggtggggtc
tctctctcacttgaggacggaggaaaaagcatgtataaagccagtggctcctcaccatca
actagtagcaaggccaagctaacgcaaaccagcaagggctcatgtggaagttcaagcggt
gtcagtgggaagcaccccagtgctaagaggcgaaccagcagtgaggacagttctttagag
cctgacatggcagaattgagtctggatgatggctccagtctggctcttggggcggaggcc
agtaatacctttgattttcttccacctccacctgagatgctaccttcacccagccctctg
cttcgagagccacgcaaattcaacagtggtaatgtttcaaaggaccgtccgttcgagacg
aaacgtgccacacacgcttccgtaccttctgctgctgacgcccacgcttgcttctctaaa
gagacctcaatgtcagccccagccgtggtagccatggagaaagaggtggaggtagaggca
gatctggatgagaacggaggagacgaggacccggttgaagatgctccaggcaaggctcag
cgtagccggagagagggagatggcagtggggcttcgcctggacctcaggcagctgaggcg
gcagccgcaggaagtggagatgcggtgggtgatgatgactatcaagcgtactaccttagt
gctgcatcagaagagggagcggagagaggagttgcagacagcaatcatgaagaagaacca
gacatctttgctggtatgaaacccttggagcaagaaggcaggatggagatactgtttgcc
tgtgtggaggctctctatgctcatggctacagtaacgatgcttgccgattagcagttgaa
ctggctcgagatcttctggctaacccacccgacctcaaggtggagcagcctcagacaaag
ggtaaaaagagtaaggtgtcgaccactaaacagacccaggtggccacaaataccctgtct
aaagtagctttcctgctaactgttctgagtgaaagactagaactccataatttggcgttc
aatactggcatgttctccttggagttgcagagaccaccagcttctactaaagcccttgag
gtaaagctggcgtatcaggagtcagaggtggtggctctgttaaagaagattcctctgggt
gttgtcgaaatgacttccataagggaccgagcagagcagctccgtgatggaaacttctgt
gactaccggcctgttctgcccctcatgctcgctagcttcatatttgatgtgctctgcacc
cctgtggtgtctcccacgggctctcgacctcctagccgtaaccgtaacaacgagatgcct
ggcgatgaggagttgggctttgaggctgctgtggcagctcttggtatgaagactactgtt
agtgaagccgagcatcctcttctctgcgaaggtacacggagggagaaaggagacctggct
cttgcattgatgatcacgtataaagatgaccaaagcaagttaaaaaagattctggacaag
ctccttgatcgtgagagtcagacccataagcctcagactctgagctctttttactctagc
aaaccagccacaagcagtcagaagagcccatctaaacacgccacccatggtgccagcggg
gccacaggcggagtgtcaaagcacgccccatcagccgctgtgcagggagtgagcggtgga
ggagcgactgggcagcagggaggtgtaacgggtgttcagagctcagagggaatcggagaa
aatagagatcaagaaggtgtgcagtcttcctcctgcgagcagcagagcgagacggcacct
ttcaaacctgagggcactgtgcccagccgtctggcactgggaggccgtggggcatacagc
acacgctgctggggatcacctgtgcggcagaaaaagaaacacacaggcatggcaagcatt
gacagtagcgctccagaaaccacatcagacagctcccccactcttagtcgacgcccactt
cgaggtggttggacagctgcttcctggggaagaggccaggacagtgacagcatcagtagc
tcttcttctgattcgctgggctcgtcgtcatccagtggctcacgcagagcaggaggagga
gccagagccaagagtactgataccagcagatataaagggcgtcggcctgaatgccacgct
ccacacgtgcccaatcaaccgtctgaggcagctgcccatttttactttgaactggccaag
accgtgttgattaaagctggaggaaacagctccacatccatctttactcaaccctccgcc
agcggaggccatcagggccctcaccgcaacctgcatctgtgtgcctttgagattggcttg
tatgccctcggcctgcataatttcgtgtctcctaactggttgtcgagaacttattcttca
catgtatcatggattacaggccaggcaatggagattggtagtgctgccctcaacatcctg
gttgaatgctgggatgggcacctcacacctccagaggtggcgtcacttgcagaccgtgca
tcccgagcacgagaccccaacatggtgcgtgctgccgcagagctggccttgagctgcctg
cctcacgctcatgcccttaaccccaatgagatacagagagcgttggtacagtgcaaagag
caggataatgtcatgttggagaaggcttgcatggcagttgaggaagcagcaaagggaggg
ggtgtttaccctgaagttttgtttgaggtggcccaccagtggtactggctgtatgagcaa
acagtgggtgggggctcaggttcccagagagagggttctggacgctgcggggccaacggt
ggaatagggagaacccctcctgagggaagctgtggtatccttgacaaccctggagtcatg
gatccatccggtgttgcagcggtaacaacaacagtgactgcggctgccgtagtacctgtg
atttctgtcggctccaccatctaccagtcacacgctttgcccggttcagccatggcgcac
gcgcagggcctccatccgtacacaaccattcagacgcatctgcccaccgtctgcacccca
cagtacttgggccatccgcttcagcacgtcccccgtcctgccgtcttccctgtgtctggg
gctgcctttccacaaggaatgcacccagccttcatcggtgctcagttcccattctcagtg
gccactggccctcatcctcctatggcagcgaccgctgtcactttccctggagttcctgtc
ccgtccatgactcagattgccgtccacccgtatcatgctgcagaggcaggtctgcctctt
agcactgctgtggcagatgaacgactttgcagaccgtttacattgatggacagctacatt
acacactgcagtaaagcaggaggggccattcaggccgcatcccttccaggactctcatcc
caacccgcctcattggtcagtgcgccttttcccgtggaagacgagcagcacagccagccg
atcagtcagcagggactgcactacctccactcggcatacagagtcggaatgctggccttg
gagatgctgggaagacgagcccacaacgatcatcccaacaacttttcccgcagtccccca
tacacagaagacgtcaaatggctgctgggcctggctgcacgtctcggtgtgaaccatgtg
taccagttttgcgtaggtgcagcaaaaggcgttctgagtccatttgtcctgcaagagatc
attatggaggctctgcagaggttaaacccagcacatatccacgcacacctccgcacccct
gccttccaccagctcgtgcagcgctgccagcaggcctacttacagtatatccaccatagg
ctgatccatctgactccggcagactacgacgactttgtgaacatcatccgaagtgcacgt
ggggcgttttgcctgacgccagttggcatgatgcagttcaacgacgtcctgcagaacctg
aagaggggcaaacagacaaaggaactctggcagaggatctctttggagatggccaccttc
tcaccctga
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