Misgurnus anguillicaudatus (oriental weatherfish): 129415733
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Entry
129415733 CDS
T09481
Symbol
msh6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129415733 (msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manu03400
]
129415733 (msh6)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129415733 (msh6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
129415733
NCBI-ProteinID:
XP_055025838
LinkDB
All DBs
Position
11:complement(30364408..30375244)
Genome browser
AA seq
1374 aa
AA seq
DB search
MAKQSSLFNFFTKSPPLVTKAKSSPSPVEADVPSNKSNTSPKEEAKIIKKTTSKPVKDHQ
KTGHAKLFGDKAVSAKQSSSSMFSAGALVWAKMEGHPWWPCMVVPQPLTGQQMRGRGRDQ
RLHVHFFDEPPTRGWVNTKYIRDYQGSDSPDAKSGGVFFSGKPVIRKAMELADLAMKESA
EQRLKMPMCADPSDEEEGDEEDMEVEKSTLSDEEMSEEEVEEKVKPGRRSSRAAAEKGQK
SKRRRIVVASDSEDSGEEFKPDQHAAGSSEEEEEEETVSSGVEEEEESEPEAEPDSPVKP
LKRKRSEKPAKAKNKSAASNTPKRAPATSVTPSLGSNTKSRLSAFSAPDNFESQNSGTGG
LDGGSTVWDHEKLDWLQDGKRKDGQRKRQSDENYDPTTLYVPEDFLNRTTPGMRRWWQLK
SEMFDTVLFYKVGKFYELYHMDAVIGVNELALTFMKGSWAHSGFPEIGFGRFSDVLVQKG
YKVARVEQTETPEMMEARCKAMARPTKFDRVVKREVCRIITRGTQTYSVLDGAPSETQSK
YLLSVKEKSEEDSAGHGHIYGVCFVDTSVGHFHVGQFQDDRHCSRLRTMVAHYSPAQVLF
EKGNPSAETLKMFKAILSSALQEGLNAGSQFWDAQKTLKVLAEEDYFKESTVDNEGGSIL
PSTLKAMTSESDSLSLTPKKGYELALSALGGCMFYLKKCLVDQELLSMGNFEEYIPVDVE
MEQAGGASCFFAKTRQRMVLDGVTLANLEILQNSSTGGPEGSLLERLDTCCTPFGKRLLK
QWLCAPLCNPSSIADRLDALEDLMGAPSQATEVTDLLKKLPDLERLLSKIHSMGTPLKGQ
DHPDSRAVLYEELIYSKRKIADFLAALEGFKVMKEIVSVMDPVAEDFRSKLLRQVLLLKA
ENKEGLFPDLSPELKRWDTAFDHQKARTTGVITPKAGFDPEFDQALSGIKDCEKDLQEYL
DRQKKRLGCKNLSYWGTGRNRYQLEVPDSVSERSLPEEYEVRSTKKGWKRYSTKEIERLF
SELQSWEDKRDAALKDCMRRLFYNFDKNYKDWQTAVECMAVLDVLLSLSRYSQSGDGPMV
RPEMVLPGDRCQASPFLDLRGSRHPCVTKTFFGDDFIPNDIFIGCPGDNEEEGQDDMKAL
APCVLVTGPNMGGKSTLMRQCGLVVILAQLGCYVPADSLRLTPVDRVFTRLGASDRIMSG
ESTFFVELSETASILLHATNHSLVLLDELGRGTATYDGTAIASAVVKELSEKICCRTLFS
THYHSLVEDHARDPAVRLGHMACMVENECEDPSQETITFLYKFIGGACPKSYGFNAARLA
NIPEEVIQSGHKKAREFERSTVSLRLFKKLCSYAEDATASRDEFNTLVQLICSL
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcaaagttccctttttaatttcttcacaaagtcaccgccgctcgtgacaaag
gccaaatccagcccgtctccagtggaggcggacgttccctcaaataaatccaacacatct
cctaaagaagaggcgaaaattatcaagaaaaccacatcaaaaccagtcaaagaccaccag
aagaccggccatgcgaaactcttcggagataaagcggtttctgcaaagcagagttcctca
tctatgtttagtgctggtgctcttgtatgggctaagatggagggtcatccctggtggccc
tgtatggttgtgcctcagcctctgaccggacagcagatgagaggtcgtggccgagaccaa
agacttcacgtgcacttctttgacgaacctccgacacgtggttgggttaacacaaagtac
ataagggactatcaaggttctgatagcccagatgccaaatcaggcggcgtgttcttcagt
ggtaagcctgtgattcgtaaagcgatggagctggcggaccttgcgatgaaagagagtgca
gagcagagactgaagatgccaatgtgcgcggatccctcggatgaagaagagggagatgaa
gaggatatggaggttgagaaatcaaccttatcagatgaggaaatgtctgaagaagaggtt
gaggaaaaggtaaagcccggtcgccgttcatctcgcgctgcagccgaaaaaggtcagaag
tccaagcgtcgacgcattgtggtggcgtctgacagcgaggactccggtgaagagtttaaa
cctgatcagcacgcagcaggtagcagtgaggaggaggaagaggaggagacggtgagcagt
ggggttgaggaagaggaagagagtgaacccgaggcagaaccagacagccctgtgaaacca
ttgaaacgcaaacgctctgaaaagcctgctaaagcaaagaacaaatctgccgcctcaaac
acccctaaacgggcaccagcaacatctgttactccgtctttgggatctaacaccaagtca
cgcctatctgctttctctgccccagacaactttgagagtcagaacagcggtacaggcgga
ctggatggagggtccaccgtgtgggaccatgagaaactcgactggcttcaggatggcaag
agaaaagatggccagcgaaaacgtcagtctgacgaaaactacgaccccacgactctatac
gtacccgaggattttttgaacaggacaacacctggaatgcgccgctggtggcagctgaag
agtgaaatgtttgatacggttctgttttataaagttggcaagttctacgagctctaccac
atggatgccgtgattggcgtaaatgaattggctcttaccttcatgaagggcagttgggcc
cattctggcttccctgagattggctttggacgtttctctgacgtactcgtacagaagggc
tacaaagtggctcgcgtggaacagactgagacacctgagatgatggaagcgagatgtaag
gccatggcacgtcccaccaagtttgaccgtgttgtaaagcgagaggtttgtcgaatcatc
acgcgaggcacccaaacctacagcgtgcttgatggtgccccttctgaaactcaaagcaag
tatctgcttagcgttaaagagaagagtgaagaagacagcgcgggtcatggccacatctac
ggggtctgcttcgtcgacacttctgtaggacacttccacgtcggacagtttcaagatgac
cgacactgttcccgtctgcgtaccatggtggcgcactactctcccgcccaggttctgttt
gagaagggcaacccatcagctgaaacgcttaaaatgttcaaggccatcttgtcatccgcc
ctacaggaaggactaaatgctggctcacagttttgggatgcccagaagactctcaaggtt
cttgcagaggaagactacttcaaagaaagcacagttgacaacgaagggggatcaattctc
ccttcgactcttaaagcaatgacgtccgaaagtgactctctgagtctcactccaaagaag
gggtacgaactagctctttctgcacttggtggctgcatgttttaccttaagaaatgtctt
gtagaccaagagcttctttcaatgggcaactttgaggagtatattcctgtggatgttgag
atggagcaagcaggtggagcatcatgtttttttgcaaagactcgccaaaggatggtcctg
gatggagtgacccttgccaatcttgagatccttcaaaatagctcgaccgggggtccggag
ggatccctgcttgaacgattggatacctgttgcaccccttttggcaaaagactcctaaag
caatggctctgcgcccctctttgtaatccatcctcaattgctgatcgcttagatgctctg
gaggacctgatgggtgctccatcccaagctactgaagtcacagacctactaaaaaagctt
ccagatcttgagagactactgagtaaaatccacagcatgggaactcctttgaaaggacag
gaccatccagactcccgagccgttttgtacgaagagctcatctacagcaaacgaaagata
gctgactttctcgcagcgctcgagggcttcaaagtcatgaaagaaattgtgtcagtcatg
gaccctgttgctgaagacttccggtctaagctgttgcggcaggtgttgcttttaaaagca
gaaaacaaagaggggcttttccccgacctttcaccagagctcaaacgttgggacacggct
ttcgaccatcagaaagctcgtaccaccggtgtgataaccccaaaggccggcttcgaccca
gagtttgaccaggctcttagtggaataaaagactgtgagaaagacctgcaagaatacctg
gacagacagaagaaaagattgggttgcaaaaacttgtcttattggggaacaggaaggaac
cgttaccagttagaagttcctgatagtgtttccgaaagaagcttgccggaggagtacgag
gtgagatccactaagaagggttggaagcgatactcgaccaaagagatcgagcgtctgttt
tcagagctgcagagctgggaagacaaaagggatgctgcgctgaaggactgcatgagaaga
ctcttctacaattttgacaagaattacaaagactggcaaaccgctgtggagtgcatggct
gttcttgatgtgttgttgagcttatcccggtacagtcagagcggtgatgggccaatggtg
agacccgagatggttcttccaggggacaggtgtcaggcttcaccctttttggatctgaga
ggttctcgtcatccgtgtgtcaccaagaccttctttggcgacgacttcattcccaatgac
atcttcatcggttgccctggtgataatgaagaagagggtcaagatgacatgaaagcactt
gccccttgtgttctagtcactgggccaaacatgggcggcaaatccacactaatgagacag
tgcggtctggtggtgattttggcacagttgggctgttatgtgcctgctgacagtttgcgt
ctcactccagtggaccgagttttcactcggcttggtgcctctgatcgcatcatgtcgggt
gagagtactttctttgtggagctcagtgagacggccagcattttgctgcacgcaaccaac
cactctcttgtcctcctcgatgaactgggcagaggtacggccacatatgacggtacagct
atcgccagcgcagtggtgaaggagctgtcggagaagatctgttgccgtactctgttctcc
acacattatcactcactggtggaggatcacgctcgggatcctgccgtcaggcttggacac
atggcctgcatggtggagaatgaatgcgaggaccccagtcaggagaccatcaccttcctg
tacaagttcatcggtggtgcttgtcccaaaagttacgggttcaacgcagctcgcttggct
aatattccggaggaggtcatccagtccggacataaaaaggcccgggagttcgagaggagc
acggtgtctctcaggttattcaagaaattgtgttcatacgctgaagatgccacagccagt
cgtgacgagttcaacacattagttcaactgatctgcagtctgtag
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