Misgurnus anguillicaudatus (oriental weatherfish): 129415859
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Entry
129415859 CDS
T09481
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04137
Mitophagy - animal
manu04140
Autophagy - animal
manu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129415859 (hif1aa)
04137 Mitophagy - animal
129415859 (hif1aa)
04148 Efferocytosis
129415859 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129415859 (hif1aa)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129415859 (hif1aa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
129415859
NCBI-ProteinID:
XP_055026004
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All DBs
Position
11:24320400..24341142
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AA seq
747 aa
AA seq
DB search
MDTVAPGKKRVSSERRKEKSRDAARCRRGKESEVFYELAKELPLPHSITSNLDKASVIRL
ALSYFRLRKLVDTGVLGVETELDCQWNSTFLKALDGFLMVLSVDGDMVYLSETVSKCLGL
PQIDLIGHSVFEFSHPCDHEELREMLAHRIGNIRFSRSLFLSQTQLLTQISLPFPSSGIL
KKGKEQHTDRNFLLRMKCTLTSRGRTVNIKSASWKVLRCSGHIHTVDAIENDECEEERVC
STYLVVICESIPHPGNIEAPLDSRTFLSRHTLDMRFTYCDERIRELLGFDPRDLLQHSVY
EYYHALDSDHMTKTHHNLFVKGQVCTGQYRMLAKAGGFVWAETQATVIYNSKNSQPQCVV
CVNYILSGIEQPKEILSLQQINSTKVKQEKEDDNEEVTMMAFKKESKEGDEKKKCLLDED
LQPAVLHDNLKGVPDELTVVDPPTANAVLTLDINTQDSAISVLKDIPLYNDVMLPSSSVL
LPLSPLSLHTDALCSTLNDSDTSTSQLEPDGFPVSQSSDLSLDSEYSEQQKSDQVNRLFS
MDLEPKTSFNVQPVGLDLEMLAPYIPMDDDFQLRTPSESICSSPCSGLEMPPSNSTQTAP
SVQVTPLESACCDTAQQNTKLIDDRVIIQDNGISSKCQTGPKLLKRKFEAITLSEAIRLG
SVVQVVAEIPEKRIKTSDASSSEGLRHTTILLLPSDVASRLLSRSSDGGALSLPQLTRYD
CDVNVPVTGRQHLLQGEELLCALDLVI
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggatacagtcgcacctgggaaaaaaagggtgagttcagagcgaagaaaggagaaatct
cgggatgctgcacgttgtcggagaggaaaagagtctgaggtgttttatgagctggccaaa
gaactgcccctgccccacagcatcacctccaacctggacaaagcatcagtcataaggctc
gcgctcagctactttcgcttgcgtaaactggtggacacaggtgtactgggtgtggagact
gaattggactgtcagtggaacagtacatttcttaaagctttggatgggtttctcatggtt
ctgtctgttgatggtgacatggtgtatctgtcagagactgtgagcaagtgcctgggtctt
cctcagattgaccttattggacacagtgtgtttgaatttagtcatccatgtgatcatgaa
gaactcagagaaatgctagcacacagaataggtaatattaggttctctcgctctctcttt
ctctctcaaacacagctcctcacacaaatctctctcccttttccctcttcaggcatattg
aagaaagggaaggagcagcacacagacagaaattttcttttgaggatgaaatgtacacta
accagcagagggcgcactgtcaacatcaaatctgcctcctggaaggttctgcgttgttcg
ggccatatccacacagttgacgccatcgagaatgatgagtgtgaggaagaaagggtgtgt
tcgacatacctggtggtaatctgtgagtctattccccatccgggcaacattgaagcacca
ctggattctagaacgttcctcagccggcacactttagatatgcgcttcacctactgtgat
gaaaggatcagagagttgttgggttttgatccaagggatctgctgcagcattctgtatac
gagtactatcacgccctggattctgaccatatgaccaaaacgcatcacaatctgtttgtg
aagggacaggtatgtaccgggcaataccgtatgctggctaaagcaggaggctttgtctgg
gctgaaactcaggccactgttatttacaacagtaaaaactcccagccacagtgcgtggtc
tgtgtcaactacatcctcagtggcattgaacagcctaaagaaatcctttcactccaacaa
atcaacagcacaaaagtaaaacaggaaaaggaggacgacaacgaggaagtgaccatgatg
gcatttaaaaaggaaagtaaggagggtgatgagaagaaaaaatgtttgctagatgaggat
ctgcaacctgcagtgctacatgataacctgaagggggtgccagatgagcttacagtcgta
gaccccccaacagcaaacgctgtgctcactctggatatcaacacccaagactctgccatc
agtgtgctgaaagacattcctctctacaatgatgtcatgttaccctcatccagtgtcttg
ttgcccctctcaccgctctctctacatactgatgcactgtgttcaaccttaaatgattct
gacacctccacctcccaactagagcctgatggcttccctgtctcacaatcatctgatctg
tctttggattcagaatatagtgagcagcaaaaatcagatcaggtgaatagactgttttcc
atggatttggagcctaagacatcattcaatgtacagccagtgggtttggatctggagatg
ttggcaccatacattccaatggatgatgacttccagctgcggactccatccgagtcgatc
tgttccagcccgtgttcaggtctcgaaatgcctccctccaatagcacacaaactgcccca
tcggtccaagtgacccctttagagtcagcgtgctgtgacacagctcagcagaacaccaag
ctgatcgacgacagagtaattattcaagacaatggtatttcgtctaaatgtcagactggc
ccaaagcttctcaagaggaaatttgaggccattactctttctgaagcaataaggctgggg
tctgtggtgcaggttgtggctgaaatacctgagaaaaggatcaaaacatcagacgcttca
tcatcagaagggctccgtcacactacaatactgttgctgccatctgatgttgctagtagg
ttattgagcagatcatcagatggtggggcattatccctcccccagcttacccgttacgac
tgcgacgttaacgtacccgtaactggacggcaacacctgctacagggggaggagctactg
tgtgccttggacctagttatctga
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