Misgurnus anguillicaudatus (oriental weatherfish): 129416303
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Entry
129416303 CDS
T09481
Symbol
col17a1b
Name
(RefSeq) uncharacterized protein col17a1b isoform X1
KO
K07603
collagen type XVII alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129416303 (col17a1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
129416303
NCBI-ProteinID:
XP_073729345
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All DBs
Position
11:19950920..19982699
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AA seq
1567 aa
AA seq
DB search
MDDLKQHRNYSGGSLGDKGIHETITTTRLASLPPRGFTASSSKGMSSNTGASSLDRNILT
QSNSGSYFFSSSGGASAGGFGSGSTEFLTEDTTVSLSRKSGGGSADCFESVFGLDSGLRL
RSSSTDGTRRTQDSCIAPLLVEKKTITLHSSHYDGSSSENSSPETKRKHYGSSRGRTSSR
ETEIRRRLQSASPSTRWTELEDVKKLLKGSRSCSVSPTRSPCSSPLPIPRKATIETKTTT
KPVEQYDNVDLDTDLTSITWNTSTLPAAISTSTSAYSFHSNTNNMATGATLASSTSPSSL
SAYGFHNNLAPVSGGLSSGANTLPGYGVHNKYSATSNSTSALGTGVSSSGYGVQKNYSTS
SNSTAAVSTGVSTSGYGVQKNYSSSPKSTAALGTGVSTSGYGVQKNYSAVSSTGVSTSGT
GTRLLNENVTKKYLISEKENIPVRRDCEDLILTKDSGKQFTNSAHNAKAESYSDVSVKKE
ALTTSYSESPLVKSSSGAYYGSAVATKDKATYAEIKDEDECGGGCCGCGPHCCSWWKWLL
GFLLALLLLLGLLFGLIALAEQLKKLKTRVNTLEGIVSNPHTERLIASINDVNSSGGEKS
VYDTSFYSGSHFREILRAEMQSESMKGYLATLVNSERGLPGPKGEIGPPGPKGDTGFPGQ
SGLPGRDGSKGEKGNAGQHGAEGSPGFRGRDGQPGPRGEPGPPGTGEKGDRGFPGAIGPA
GPPGPKGATGLHGEPGFRGELGPKGDRGLPGIKGDRGDKGDNGFPGIPGSPGRSGSAGEK
GDKGSSGPQGATGEKGQRGETGSIGLPGIRGAAGPPGDAGIPGTPGIQGPPGIPGNPGQP
GTKGETGEPGRVINAAGSSSVAIPGPPGSPGPPGPPGAPGLSGPIGPAGLPGQPGPKGPK
GDQGDQGEPGIVVRTSETVSSRHTGSVYSAQNAGPAGPPGPPGPPGPPGNSIQGPPGPPG
LPGYGQPGPKGDRGDSGTLVPNSGTFFSGPPGPPGPQGPKGATGAPGPRGYQGEPGQPGL
PGSSGRVITEYGTGQGPPGPPGSPGLPGRDGQKGEPGTPGRTIYQTDSRGSFAAGPPGQP
GPPGPPGPPGTPGHSSGSHSAADYRHYIREYMQSDSMRQHLSSIQGPPGPPGASASVEDV
ASRVIAYLRRSGTSGVSFSQGPQGPPGPPGPSGTISAEYIISLLQRDDVRRYVMGPPGPP
GAPGSVTSTFNTQEVANYVLRVMNDKGMINRPGPPGPPGPPGQPGSTYSDIVTLIQKAGL
SGSIGRPGPPGIQGPPGPPGIPGSSTSVVSGYKLEEIQQYLQKSGFRGPPGPPGPRGPPG
DSISSVSYSGSSYSGSSQAFQSQRDLIRSELKDYFNSDTVRLYAYGLPGPPGPQGEKGER
GEPGYSHQTVRSQYHYGTQTGEPLDYSNVAVKVTDYIKNQGLLQDMTETYWRSQVGRLQG
APGPAGPPGPPGYSRVFAAYGNITADLVDFFRIHGTIPGPPGRQGPRGERGYPGPKGEKG
EIGSSGIPGLPGQRGPEGPRGEKGEKGEIGNPGKPGLLGQRGPQGPRGEKGEKGDIQTGR
WRRATGV
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttaaaacagcatagaaactattcaggaggaagtttaggagacaaaggcata
catgaaacaattacaacaactagacttgcatctctaccaccacgaggcttcactgcgtcc
tccagtaagggtatgtcaagtaacactggagcttctagcctggataggaacattttaacc
caaagcaacagcggttcttatttcttttcttcatctgggggcgcgagtgctggcgggttc
ggatctggttccactgaatttctgacagaggacaccactgtgagcctaagcaggaagtca
ggtggtggttctgctgactgttttgagagcgtctttggattggactcagggctaaggctg
agatccagctccactgatggcacaaggagaacacaagactcctgcattgcccctctgttg
gtggaaaagaaaaccataacccttcactccagtcattatgatggaagctcaagtgagaat
tcatccccagagaccaaaagaaaacactatggatcaagtagaggaagaacttcgagcaga
gagacagaaatcaggagaagactacagagtgcatctccttctacaagatggacagagctg
gaggatgtgaagaagctgttgaaaggttcacgctcctgcagcgtgagcccaacaagatct
ccctgctcctctcctctgcccattcctcgcaaagccaccatagagaccaagaccaccacc
aaaccagttgagcaatatgataacgttgatctggacactgatctgacctcaattacctgg
aacacctctacactgccggctgcaatctccaccagtacttcagcctacagctttcacagc
aacaccaacaacatggcaacaggagctactcttgcaagcagcacatctccatcatcttta
tcagcttatggatttcataacaatttagctcctgttagtggtggtctttcgagtggagct
aacacacttccaggatatggagtacataacaaatattcagcaacttcaaacagcacttct
gcattgggcacaggtgtctccagttcaggatatggagtgcagaaaaattattcaacaagt
tcgaacagcaccgctgcagtaagcacaggcgtctccacttcaggatatggagtacagaaa
aattattcatcaagtccaaagagcactgctgccttgggaacaggtgtctccacttcagga
tatggagtacagaaaaattattcagcagtgagcagcacaggcgtctccacttcaggaacc
ggtacaagactccttaatgagaatgtgacaaagaaatacctgatatcagagaaagagaac
attcctgtaaggagagactgtgaagatcttattttgaccaaagacagcggcaagcagttt
accaacagtgcccacaatgccaaagcagagtcatattcagatgtttcagtgaagaaggaa
gctttgacaaccagctattctgaaagtcctctggtcaagtctagctctggtgcatactat
gggtctgcagtggcaacaaaagataaagctacatatgcagagattaaggatgaggatgaa
tgtggaggaggttgctgtggatgtgggccacactgttgttcctggtggaagtggctgctg
ggctttttgctcgccctgctgctgctccttggacttctgtttggactcattgctttggct
gagcagttgaagaaactgaagactcgtgtcaacactcttgagggaattgtctcgaatcca
cacacagaacgcctgattgcttctattaatgatgttaacagcagtggtggagagaaatct
gtgtatgatacttcattctattcaggcagtcattttagggaaatactgagagcagagatg
cagtctgaatcaatgaaaggctaccttgcgactttagtcaactctgaaagaggactgcca
gggcccaaaggtgaaattggacctccagggcccaagggagacacaggtttcccaggacaa
tcaggattaccaggaagggatggatcaaaaggggaaaaaggaaatgcaggtcaacatggt
gcagaaggatcaccagggtttaggggaagagacggacaacctggaccccgtggagaacca
gggccacccggaactggagaaaagggtgataggggtttccctggtgccattggtccagct
ggtccacctgggccaaaaggtgctactggtttacatggtgaaccaggctttagaggtgaa
cttggtccaaaaggtgacagaggacttcccggaattaaaggtgatcgtggtgataaagga
gacaatgggtttccaggtattcctgggagtccagggagatctggatcagctggagagaaa
ggagataaaggatcttcagggcctcaaggagctactggtgaaaagggccaaaggggagag
actgggtcaattggattaccaggaatcagaggagcggctgggccacccggtgatgctggg
ataccaggaactcctgggattcaaggccctccaggcattcctggcaatcctggtcaacct
gggactaaaggtgagaccggtgaacctggaagagtgattaatgcagcaggctcaagctca
gtggcaatcccaggaccacccggcagccctggacctcctggcccacctggagctccagga
ctctcaggacccattggccctgctggacttcctggtcagcctggtcctaaaggtcctaag
ggagatcagggagatcaaggagaacctggtattgtcgtgagaactagtgagactgtgagt
tcaaggcatacaggaagtgtttatagtgctcagaatgctggaccagctggtcctcctggt
ccaccagggcctcctggacctccaggcaattctatacaaggaccaccgggaccaccaggc
ttgcccggatatggacaaccaggcccaaaaggagacaggggagattcaggaacccttgtg
cccaattcaggaacatttttttcaggaccacctgggccacctggacctcaagggcctaaa
ggagcaacaggtgccccgggtccaaggggataccaaggggaaccaggtcagcctggcctt
ccaggaagttcgggtagagttatcactgaatacggtacgggtcaaggaccacccggtccc
ccaggatcacctggactacccggacgagatggccaaaaaggggaaccaggaacgccgggt
agaacaatataccaaacagactcaagagggtcgtttgcagccgggcccccagggcagcct
ggtcctccaggtcctccgggaccacccggtactccagggcattccagtggatcacattct
gctgcagattatcgtcattacattagggagtatatgcagagtgacagcatgaggcagcat
ttgtcaagcatacaggggccaccgggaccacctggggcttcagcatctgtggaggacgtg
gcatctcgagttattgcctaccttcggcgtagtggaactagtggtgtctcttttagccaa
ggcccccaaggtccacctggtcctccaggcccatcaggaactatatccgctgaatacatt
atttctcttttacagagagatgatgtaaggcgttatgtaatgggccctccagggccacct
ggagcacctggcagtgttactagtaccttcaacacgcaggaagtggcaaactatgtcctc
agagttatgaatgacaaggggatgataaatagacctggaccaccaggccctcccggccct
ccaggccaaccaggttccacctacagtgacatagtcactttgattcagaaggcagggctt
agtggaagcattggacgtccaggtcctccagggatacagggacctcctggtccacccggt
atcccgggaagcagcacttctgtggtctcgggttacaaactggaggaaatccagcaatac
ctgcagaaatctggttttagaggacctcctggccctcctggtccacgaggacctccagga
gactctatatcctctgtgtcatatagcggatcttcatatagtggatcttcccaggctttc
cagtcccagcgagacctaatccgttctgagctaaaggactactttaacagtgacactgta
agactctacgcttatggtctccccggacctcctggacctcaaggagaaaaaggtgaacgt
ggtgagccaggatatagtcatcagactgtcagaagccagtaccactatgggactcagacc
ggtgaaccactggactactccaatgttgcagtgaaagtgactgactacattaaaaatcag
ggtctactgcaggatatgactgagacgtactggagaagtcaagtaggaagactccaagga
gcccctggacctgctggtcctcctggtccgcccgggtatagccgcgtgtttgcagcctat
ggaaacataactgctgaccttgtggacttctttagaatacatgggactattccagggcca
cctggtaggcaggggccaagaggagaaagaggatacccaggacctaaaggagagaaaggg
gagataggaagttcaggaatacctggcctgccaggacagagaggacctgaaggaccaaga
ggagagaagggtgaaaaaggggagattggaaatccaggaaaacctggcctgctagggcag
agaggaccccaaggaccaagaggagaaaagggtgaaaaaggtgatatccagactggtaga
tggagaagagccactggtgtgtaa
DBGET
integrated database retrieval system
