Misgurnus anguillicaudatus (oriental weatherfish): 129416387
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Entry
129416387 CDS
T09481
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129416387 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129416387 (pnpt1)
03016 Transfer RNA biogenesis [BR:
manu03016
]
129416387 (pnpt1)
Enzymes [BR:
manu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
129416387 (pnpt1)
Messenger RNA biogenesis [BR:
manu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
129416387 (pnpt1)
Transfer RNA biogenesis [BR:
manu03016
]
Prokaryotic type
tRNA degradation factors
129416387 (pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
129416387
NCBI-ProteinID:
XP_055026669
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All DBs
Position
11:4646673..4663622
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AA seq
755 aa
AA seq
DB search
MSCVMRSRLGWLRFGYRSFHQKSAAVSLGDRRLEISTGTLARFADGCSVVKLGETSVMVT
AVSKTKPSVSQFMPLVVDYRQKAAAAGRIPTNYLRRELGTTDSEILTSRLIDRSIRPLFP
AGYFYETQVLCNILAADGVNDPDILAINGASAALALSDIPWNGPIGAVRIGLADGEFIVN
PTRSEMNRSVLNLVVAGAASSSVVMLEAAAENVLQQDFCHAVKLGVKHAQQIILTIQQMS
RELKVTKRTPGKLFTASAEMVEYARQLASDKIYAVFTDFTHDKISRDEAINKIRLDTEEL
IKEKFPQSESFEVMEAFNSVSKDIFRNLVLHEYRRCDGRDLTSLRDISCQVDIFKPLHGS
ALFQRGQTQVLCTVTFDSLESSIKTDLITTALSGVKDKNFMLHYEFPPYATNEIGKMSGM
NRRELGHGALAEKALRPVVPKDFPFTIRVTSEVLESNGSSSMASVCGGSLALMDSGVPIS
SAVAGVAIGLISKPSPDKTSELADYRLLTDILGIEDYNGDMDFKMAGTSKGITALQADVK
IPGLPLKIVMEAIQQATVAKKEILGIMNKTISKPRSSTKENGPLVENVKVPLSRRARFVG
PGGYNLRKLQAQAGVTISQVDEETFSVFAPTPSAMNEAQEFMKEICKDDQEEQLEFGAIY
TATITEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPTALGLEVGQQIQVKYFGRDPTD
GRMRLSRKVLQSPAATVVKSLSEKQSISIGESQDS
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtgtgatgagatcccggttaggatggcttcggttcggttacaggagttttcat
cagaagagtgcggcggtcagtctcggggaccggaggctggagatctccacagggacgttg
gccaggtttgctgatggctgctctgtggtcaagctgggtgaaacatctgtgatggtcaca
gctgtcagtaagaccaaaccgtctgtctctcagtttatgcctcttgtggtggattacaga
cagaaagcagcggctgcaggtcgaatccccaccaactacctgagacgagagctgggcacc
acagactcggagatcctcaccagtagactcatcgatcgctccatcaggccattgtttcct
gctggatacttctatgagacacaggtgctgtgtaacatattagctgctgatggggtgaat
gatcctgatattctggctattaatggagcgtctgccgctctggctctgtctgatattccc
tggaatggaccaatcggtgcggtgcgtatcggtctcgcagatggagagtttattgttaac
ccgacacgctcagagatgaacaggagtgtgttgaatctcgtggtcgctggagctgcctcc
agtagcgtggtgatgctggaggcggcagcagagaatgtacttcagcaggatttctgtcac
gctgtgaaattaggagtcaaacatgcacagcagatcattctgaccattcaacagatgtca
agagaactgaaagtaaccaagcgaacaccaggcaaactcttcactgcttcagctgagatg
gtggaatacgcccgacaattggcatctgataaaatctatgctgtatttacagacttcaca
catgacaagatatccagagatgaagccattaataaaattcgtctggatacagaggaactc
atcaaagagaagtttccacagtccgagtcatttgaggtgatggaggcgtttaacagcgtc
tcaaaagatatattcagaaatcttgttcttcatgaatacagacggtgtgatggtagagat
ctgacatcattgcgggacatttcctgtcaggtggatatatttaaaccgttgcacggctca
gctctctttcagaggggacagacacaggtgctgtgcacggtaacgtttgactctctggag
tccagtattaaaacagatttaataaccacagcactcagtggcgtcaaagacaagaatttc
atgctgcactatgaatttcctccatatgcaacaaatgagatcgggaagatgagtggaatg
aacagacgagagcttggtcatggggcgttggcagagaaagcattgagacctgttgttcct
aaagactttcccttcaccatccgtgtcacatctgaggtgcttgagtccaatggatcatcc
tcaatggcatctgtgtgtggtgggagtttagcgctcatggattcaggtgttccaatctct
tctgctgtggcaggagtcgccattggtctgatatctaaacccagtcctgataaaacatct
gaactagcagactacagattactgactgatatattgggaatagaagattataatggtgac
atggattttaaaatggcaggcaccagtaaagggatcacagctctgcaggcggatgtaaaa
atccctggacttcctttaaagatcgtcatggaggcgatacagcaggccacagtggctaaa
aaagagattttaggtatcatgaataagacaatatctaaaccgaggagctccacaaaggag
aatgggccacttgttgagaacgtcaaagtgcctttgtctcgaagagctcgatttgtaggt
ccaggtggttacaatctccgcaaactacaagctcaagcaggtgtaacaataagtcaagtg
gatgaggagacgttctcagtgtttgcacccacacccagtgccatgaatgaagcccaggag
tttatgaaagaaatctgcaaagatgatcaggaggaacagctggagtttggtgccatatac
acagccaccattacagagatcagggacattggtgtgatggtgaagctgtatcctaacatg
agcgctgtgctcctacacaactcacagctggatcataaaaggataaaacatcccactgct
cttggattggaggttggacagcagattcaggtgaagtattttggccgagaccccacagat
ggcaggatgagattatcacgtaaagttcttcagtctccagcagcgactgtagtgaagagt
ctcagtgagaaacagagcatctctataggagaatctcaagactcatag
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