Misgurnus anguillicaudatus (oriental weatherfish): 129416524
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Entry
129416524 CDS
T09481
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129416524 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
manu04990
]
129416524 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
manu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129416524 (pdlim1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
CASP_C
Motif
Other DBs
NCBI-GeneID:
129416524
NCBI-ProteinID:
XP_073729376
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All DBs
Position
11:complement(20586285..20591304)
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AA seq
322 aa
AA seq
DB search
MPLRVVLEGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQANLCIGDMILSIDGESTDGM
THLEAQNKIKGCTDEMVLSVDRSESKMWSPLVTEEGKTNPYKMNLANTDPQDVKHIGSAH
NRSAMPFSSGGPRVVTNLYNNPAGLYSNENIKSFNSAVGDVKNSATSSESSKNLDASRPG
QARPPLAAESEVYKMLQENQEAQEPPRQSASFKVLQEILDTGDSEKPSGFRSVKAPSPRI
GASVGNTEKLSVCDKCGSGIVGMMVKVRDRFRHPECYVCTDCGINLKQKGHFFVEDKIYC
EKHARERVTPPEGYDVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgccgttacgtgttgttttagaaggtcctgggccgtggggattccgtctggtaggagga
aaagatttcgagcaacctttgaccatctcgagggtgacccctggaagtaaagcagcgcag
gccaatctttgcattggggacatgattctgtctatagatggagagtccacagatggtatg
acacacctggaagcccaaaataaaatcaagggctgcacggatgaaatggtgctttccgtt
gacagatcagagtcaaaaatgtggtcaccactggtcactgaagaaggaaagactaatccg
tacaagatgaatctggcaaatacagacccacaggatgtgaaacacataggctctgctcat
aacaggagtgccatgccattcagttcgggtggtccgagagtagtcaccaacctgtacaac
aatcctgctggcctgtactccaatgaaaacattaagagctttaacagtgcagtgggtgat
gtcaagaactctgccacctctagtgaatccagtaaaaacttagatgcttctagaccgggt
caggcaaggcctccattagctgcagaatctgaggtgtacaaaatgctccaggaaaatcaa
gaggcccaagagcctcctcgccagtctgcttcttttaaagttctgcaagagatcctggac
actggtgattcagaaaaaccctctggcttcaggagtgtgaaagccccctccccaagaatt
ggagcctcagtagggaatactgaaaagctcagtgtgtgtgacaaatgcggatcagggatt
gtgggaatgatggtcaaagttcgagaccggtttcgccacccagaatgctacgtctgcaca
gactgcgggatcaaccttaagcagaaaggacacttttttgttgaggacaagatttactgc
gagaaacacgcacgtgaacgtgtcactcctccagagggctatgatgtcgtcacggttttt
ccaaagtag
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