Misgurnus anguillicaudatus (oriental weatherfish): 129416851
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Entry
129416851 CDS
T09481
Symbol
col13a1
Name
(RefSeq) uncharacterized protein col13a1 isoform X2
KO
K16617
collagen type XIII alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
manu00536
]
129416851 (col13a1)
Glycosaminoglycan binding proteins [BR:
manu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129416851 (col13a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
129416851
NCBI-ProteinID:
XP_055027248
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Position
11:complement(11226744..11345818)
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AA seq
683 aa
AA seq
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MHPTAASVLQGPPGRAGFPGDKGSLGIPGRMGIKGNSGDKGAPGEPGLSIIGPRGPPGQP
GTRGFPGFPGPIGMDGKPGQNGPKGDMGARGPKGVPGDPGPKGEKGVCGDYTHRQMLPIT
VRNMPSISPLILKRLKQGEPGAQGPPGPPGPPGPAGSPGLTGANGPPGKPGEPGKPGKDP
RMLPGLKGEPGVPGQKGDRGEVGPSGPEGPKGVKGDDGEKGEQGLNGQTGEKGEKGELGM
PGKQGVKGESGFPGIPGQKGQAGVAGIPGKRGYKGEKGEPSAAGAGIKGEPGTPGLPGPA
GPKGEKGDQGIKGELGLEGPSGPRGPPGPTGEPGKTLINNNENDIRNVHSMGPPGLPGPP
GPPGTPGLKGDVGLPGPPGLDGEKGPRGKPGEHGPIGPPGPEGPRGEGGVMGFPGPKGDK
GDMGPSGSPGLDGPTGEKGVSGPPGSIGLPGPMGQKGEPGEKGDKSELVYGPAGPPGPAG
PVGPMGPPGLLGPKGEPGVGLRGEKGSLGQKGDKGDRGHLGLPGAHGLDGRPGPVGLIGP
AGVPGPAGPKGEMGEKGDMGVPGPIGPQGIPGLVGPLGLKGNRVFLFPFPPPAPWPVSRG
SVCRLGPGRPLCTPLTPGLLLLLLLHPNILAWVNIPPLPHLLLLFISSTYLPSILCSFSP
NYTNAQRSRCSIKTHLVVFCNST
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccacagctgcctctgtcctccagggtccacctggacgagctggctttccggga
gacaaaggatcattgggcattcctggaagaatgggcataaagggaaattcgggggataag
ggagcaccaggggagccgggtctgtctatcattggcccacgaggacctcctggacaacct
ggtactagaggatttccaggttttccgggtcctatcggcatggatgggaaacctggacag
aacggcccaaaaggcgatatgggtgctcgtggtcctaaaggagttccaggtgaccctggt
ccaaaaggagagaagggtgtatgtggtgactatactcacaggcagatgttgcccatcacc
gtgcgcaacatgccctcaataagccctctaatcctaaagcgcctcaagcagggcgagcct
ggagcacagggaccaccggggcctcctggacccccagggcctgcaggaagtcctggcctt
actggcgctaatgggccccctggtaaacccggagaacccgggaaacctggaaaggaccca
agaatgctaccagggctgaagggtgaacctggtgtacctggacaaaagggtgatcgtggt
gaggtgggtccaagtggacctgaaggccccaagggtgttaaaggagatgatggcgagaag
ggagagcaaggattgaatgggcaaacgggagaaaaaggagaaaagggcgagctaggaatg
cctgggaaacaaggagtaaagggagagtctggttttccaggcatccctggtcaaaagggt
caggcaggtgttgctggtatccctgggaagcggggctacaagggagagaaaggtgagcct
agtgctgcaggagctggcattaaaggtgaaccaggcaccccaggactgccaggaccagct
ggacccaagggtgagaaaggtgatcaaggcataaagggtgaacttggcctggaaggtcca
tctggaccaaggggtccaccaggtccgacaggggagccaggaaagactttgatcaacaac
aatgagaatgatattcgtaatgtgcattcaatgggtcctcctggtctaccagggcctcca
ggacctccagggactccgggcttgaagggtgatgttggactgccaggtccccctggtctt
gatggggaaaagggtccacgaggaaaaccaggagaacatggacccattggccctcccgga
ccagaggggccacgaggagagggaggcgtcatgggcttccctgggccaaaaggagacaag
ggagacatgggcccatctggatcacctggtttagatggccctactggagaaaagggtgtt
tcagggccacctggctctattggattgccaggcccaatgggtcagaaaggtgaacctggg
gagaaaggcgacaaatcagagctggtttatgggcctgctggacctccaggacctgctggg
ccagttgggccaatggggcctccaggtttgttaggaccaaagggagagccaggagtcggt
ctaagaggagagaagggatcacttggacagaaaggagataaaggagacaggggccatctt
ggacttcctggggctcatggtttagacggcagacctggtccagtgggtctgataggaccg
gctggagtccctggccctgcgggaccaaaaggagaaatgggggaaaagggagatatggga
gtaccaggaccaattgggcctcaaggcatccctggtttagtaggaccactgggattaaaa
ggaaaccgggtcttcttattcccttttcctccccctgcaccttggcctgtgtcccgtggc
tctgtttgccgactcgggccgggtcgtcctctctgtacccctctcacccccggcctcctc
ctcctgctcctcctgcatcctaatattttagcctgggttaatattcctcctcttcctcac
ctcttacttttgttcatatcctccacttacctcccttccatcctgtgttcattttctccc
aattacactaatgcacagagatctcgctgttccataaagacacatctggttgtgttttgt
aatagcacataa
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