Misgurnus anguillicaudatus (oriental weatherfish): 129416871
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Entry
129416871 CDS
T09481
Symbol
rims1a
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129416871 (rims1a)
Membrane trafficking [BR:
manu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
129416871 (rims1a)
Small GTPases and associated proteins
Rab associated proteins
129416871 (rims1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
PDZ_6
FYVE_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
129416871
NCBI-ProteinID:
XP_055027273
LinkDB
All DBs
Position
11:complement(21804679..21895257)
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AA seq
1604 aa
AA seq
DB search
MSASVGPRGGPRPPTAQSSLPELPDLSHLTEEERKIIMAVMIRQKEEEEKDEAMLKEEKP
IQAKTVNLVGNKKPPQQNDISLHQQFATYKEQVRRTGQEPQQRQQGQHKDDAPTCGICHK
TKFADGCGNLCSYCQTKFCARCGGRVSLRSNNKKEDKVVMWVCNKCRRQQDMLTKSGEWF
PGQGPKSAELGSALSEPAMCGDPSGEKKLRSRSQNPLGSSVSTAHDTQSPAPTNPSKGLS
TGIADALSSRSRSEPPQDRKKPPAASDQNGKPGPRGERRRGVSKVQSQASEDRQSGENRR
ESRRLVKARSQEHGDADKGRVVLRRAEGEPRTPREKCRSDPNALHHPSKLQPTEPDGRPQ
PKPREAGQMGQENRVARKWADGRQASLDGQQQAYMPERTVGGTGIQGRPAVQGPPSKMNH
TPQPPAPGFRVGPAMPVGPPELREPQERDRKLQQSHLDPGSAGLLRKSKRQKMESMLRND
SLSSDQSESLRPPPPRPYKSKRGGGNKRQMSVSSSEEEGGSTPEYTSCEDVEIESVSERG
GSGDWECCPLDPTAWHPPVTWQPSKEGDHLIGRITLSKKGAMPKEAGALLGLKVVGGKIT
ETGRLGAFITIVKKGSLADVVGHLRAGDEVLQWNGKSLPGLTKKEVYNIILDSQTATQVE
LIVSRPIGDIPRIPETSHPPLESTGSSSFESQKMERPSISVLSPSSPSGLRDAPQLLPGQ
LSVKMWYDKVGHQLIVNVLQAIDLPPRQDGRHRNPYVKMYFLPDRSDKSKRRTKTVKKSL
EPKWNQTFVYSYVHRRDFREHMLEITVWDQPRIQEEESDFLGEILIELETALLDDKPHWY
KLQTHDVSSIPLPHPSPYLPRRHTHNDTPTKKLQRSQRITETDYDDAIGIVATAVENRSR
ERERGRTTTLEVPDQQRPTQYRSRSVSPHREEESRARSRPPNVPAQRSLDEVPHNRRSRS
PTRYHDRTRVKERDYVDDSEVILIHRSVRGRSAECLHNQRRSSNYSSTLPPKMPLLVNGI
HKDIYSSTLPACLKSKSRLSVVTATQRAVKRQVCRFTDEINFSDLQPSLGRVRSASTNCL
RPESNSSSPERDRSTQSLPRTRPTSPRILIQHASPEDDSWVLEAMFPAQETMHHLSAKPD
AQRQSRTLDKPSCQKLGRKMSDSERVQPHSGPSFSSSTAAPSSTRKVRQLPQVPAKSSSV
EQALASEERTRLMKVRTFRSSAPSSTSQDMERTLKNKRELYKEQRRSCDNVSHKSSDSDV
SDVSAISRASSASRISSTSYMSIQSEQPIGRFSRHMRSSNRSMLKSASGEIYTLERTDGS
QSDTAVGTLGAGGKKRRSSLSARVVAIVGIPSRRCRSTSQLSQTEAANKKAKGSSQIQRS
QETGMAVEYPRNVMARQASRESTDGSMNSYSSEGNLIFSGMRLGADSQFSDFLDGLGPAQ
LVGRQTLAAPAMGDVQIGLINKKGQLEVEVIRARGLTPKPGSKSLPAPYVKVYLLENGVC
KAKKKTKIARKTLDPLYQQVLLFEESPQGKVLQVIVWGDYGRMDHKCFMGVVQILLEELD
LSSTVIGWYKLFPPSSLVDPTLAPLTRRASQSSLDFSGPPGIRS
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcggtggggccccgcggcggccctcgcccacccaccgcgcaaagctctcta
cccgagctcccggacctcagtcacctcaccgaggaggagaggaaaattatcatggctgtg
atgattcggcagaaggaagaagaggagaaggatgaggccatgttaaaagaggagaagccc
atacaagcaaaaactgtaaacttggtcgggaacaagaaaccccctcagcagaatgacatc
agcttgcaccagcagtttgccacctacaaagagcaggtgagacggactggccaggagccc
cagcagaggcagcagggccaacacaaagatgacgcccccacctgtggcatctgccacaag
accaagtttgctgatggctgcggcaacctgtgctcctactgccagactaagttctgcgcc
cggtgcggtggacgggtctctctgcgttccaataataagaaggaagacaaagtggtaatg
tgggtatgtaacaagtgccgtaggcaacaggacatgctcactaaatcaggagaatggttt
ccaggccaagggcccaagtctgcagagctggggtcagcattgagtgagccggccatgtgt
ggagacccctctggtgagaagaagttgcgctctcggtctcaaaaccctctcggctcctcc
gtttccactgcccatgacacccagtcacctgccccgactaaccccagtaaaggcctctct
actggaatagctgatgcgctgtcatcccgctcacgaagtgagcctccgcaagacagaaaa
aagccaccagcagcctccgaccaaaatggcaaaccaggcccaagaggtgaaaggcggcga
ggcgtatccaaagtccaatcccaggcttccgaagataggcagtctggagaaaatcgaagg
gaaagtcgaagactggtgaaggctcgatctcaggagcacggcgatgctgacaagggaagg
gttgtgctcaggagagccgagggggaaccaagaacacccagggaaaaatgcaggagtgat
ccaaatgccctacatcatccatccaagcttcaaccaacggagcctgatggacgtccgcag
cccaagccaagggaagcagggcagatgggacaggagaacagggttgcacgaaaatgggcg
gatgggcgacaggcctctttggatggtcaacaacaggcctatatgccagagaggaccgtg
gggggtacaggtatccagggcaggcctgccgtgcagggtcctccctctaaaatgaaccac
accccacagccacccgctccggggttccgggtgggccccgccatgcctgttggcccacct
gagctcagggagccccaggaaagggacagaaagttgcagcagagccacctggaccccggc
tcggctggactgttgcgcaaatcgaagcgtcaaaaaatggagagcatgctccgcaatgat
tcacttagctccgaccaatcagagtctttacgaccacccccgccccggccctacaagagc
aaacggggtggcgggaacaagaggcagatgtccgtcagcagctcagaagaagaaggcggt
tcgacaccggagtacactagctgtgaggatgtagagattgagagcgtaagcgagcgaggg
gggtcaggggactgggagtgctgtccactagaccccactgcatggcatccaccagttaca
tggcagccctccaaagaaggtgatcatttaattggccgaatcacattgagtaaaaaagga
gccatgccaaaagaggccggggctcttcttgggctaaaggtggtgggagggaagattaca
gaaaccggcagacttggggccttcatcaccatagtcaagaaaggaagtctagctgatgtg
gttggacatctacgagcaggtgatgaggtgcttcagtggaatggtaaatcattaccagga
ttaaccaagaaggaagtttacaatattattctggattcccaaacagcaacacaagttgaa
ttaatagtttcaaggccaataggtgatataccacgaataccagaaacatcacatcctcca
ttagaatccacgggttcaagttcctttgaatcacagaagatggaaagaccatctatatct
gtcctgtccccatccagcccaagtggtcttagagatgcccctcagctactgcctggtcag
ctgtcggtgaagatgtggtatgataaggtaggacatcagctgatagtgaatgtactacag
gccatagacctgccacccagacaggatggacgtcacagaaacccttatgtcaaaatgtac
ttcctgcccgatagaagtgataaaagtaaaagacggacaaagacagttaagaagagtcta
gagcccaaatggaaccagacgtttgtgtattcttacgtgcaccggcgggatttcagggag
cacatgctagagattactgtgtgggaccaacccagaatccaagaggaggagagtgacttt
ctgggagaaatcctgattgagctggagactgccctactggatgataaacctcactggtac
aaactgcagacccatgatgtctcctccattcctctaccacacccatcgccatacctgccc
cgacgacacacccacaatgacacgccgaccaaaaagctgcaacgctcgcagcgtattaca
gaaacagattatgatgatgctattggcatagtcgccacagctgtagaaaaccgatcaaga
gaaagagagagaggtcgaacaacaactttagaggttcctgatcagcagaggccaactcag
tatcgctcgcggtcagtgtccccacacagagaagaagaaagcagggctcggtcccgtcca
cccaatgttcctgcacagaggagtctggatgaggtcccgcacaaccgtagatcccgttcc
ccaacacgttaccatgaccgtacccgtgtgaaggagagagattatgtagacgacagtgag
gtcatcttgatacacagatcagtgcggggtagaagcgcagagtgtctgcacaaccaaaga
cgttcatctaattatagtagcactcttccacctaagatgcctttattagtcaatggaatt
cacaaggatatttacagctcaacacttcctgcatgccttaagtcaaagtcacggctgtct
gtagtcactgctactcaacgtgcagtcaaacgccaagtttgtaggttcacagacgagatc
aactttagtgatctacagccctctcttggcagggttagaagtgctagtaccaactgtctg
agaccagaatctaattccagttctcctgaacgagacaggagcacccagtctctgccccgt
accagacccacaagccccaggatccttattcagcatgcctccccagaagatgacagctgg
gttttggaggctatgtttcccgctcaggagactatgcaccacctcagtgcaaagccagac
gcacagaggcagtcgagaactctggacaagccgagctgtcagaaacttggcaggaaaatg
tctgacagtgagcgggtgcaaccccactccggcccctcattttcctcttcaacagcggcc
ccttcttcgacacgcaaggtcagacagttaccccaagtccccgccaaaagcagcagtgta
gagcaagctcttgcctcagaggagcgaacgcggctaatgaaagtacgtaccttccgatca
tcagctccctccagtaccagccaggacatggagaggacgctgaagaataaacgagagctt
tataaggagcagcgacggagctgtgacaatgtgtcccataagtcctcagacagtgatgtc
agcgacgtgtcagccatctctcgcgccagcagtgcctcgcggatcagtagcaccagctac
atgtccattcaatcagaacagccaataggtcgcttcagccgccacatgcgttcgtccaac
cgcagcatgctgaagagtgcaagtggggagatctacacactggagcgtacggacggcagt
cagtcagacactgctgtcgggacactgggagcaggaggaaaaaagcgcagatccagcctt
agtgcccgcgtcgtagccattgtgggcattccctctcgccgctgcaggagcacctctcag
ctcagtcagacagaagcagccaataagaaggcaaagggatccagtcagatccagcgcagt
caggagacgggtatggcagtggagtatccccgcaatgtcatggcccgacaggccagccga
gagtccaccgacggcagcatgaacagttacagctctgagggcaatctgatcttctcaggg
atgaggttgggagctgacagccagttcagtgacttcctagatggtcttggtcctgctcag
ttggtgggacggcaaacactggccgcgcctgctatgggagatgttcagattggactaata
aataagaaaggacagctggaggtagaggttatcagggctcgtggtcttacacctaaacca
ggttccaaatcgctgccggctccctatgtcaaggtctatttgctggaaaacggagtgtgc
aaagccaaaaagaaaaccaagattgcacgaaaaacgcttgatcctctgtatcaacaagtg
ctgttgtttgaggagagtccacagggtaaagtcctccaggtaatagtctggggagattat
gggcgcatggaccacaaatgtttcatgggagttgtacagattcttttagaagagctggat
ctttctagcacagtgatcggttggtacaaactctttcccccctcatcattggtcgatccg
acgttagctcctctcactcgccgcgcttcccagtcatcgctggacttttcagggccgccg
ggcatcaggtcctag
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