Misgurnus anguillicaudatus (oriental weatherfish): 129417155
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Entry
129417155 CDS
T09481
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129417155
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129417155
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
129417155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
zf-RING_5
DUF3112
Motif
Other DBs
NCBI-GeneID:
129417155
NCBI-ProteinID:
XP_073725595
LinkDB
All DBs
Position
7:18865911..18918845
Genome browser
AA seq
1741 aa
AA seq
DB search
MAVSQSSVLLSTKWWEASNRGAAILSYLGEKVPLLYCLETEQQDEEQKVEEHLLYPLECF
LFGEDPHAGLEKLQQCDSGSSSQQCGRVFKEGETVYSCRDCAIDPTCVLCMECFQKSVHK
SHRYKMHASAGGGFCDCGDLEAWKTGPYCSQHDPGTSVPMETDECTLDSGLQERAQTLFR
TLLHYTADLLVWKENDELSEELKPKVKEDTYFCVLYNDEHHSYDHVIYTLQRAIGCDQNE
AQIYTTLIDKEGRKAVKRGILRSCQQAKDSIRRNSEHITQQPLRVEILHTAVMAHQTFAL
RLGTWFQKIFGYSVGFRQVFCQVALEPGVDNDKLCLISRVMLHDAKLYKGARKVVHELIF
SSLLMDTEYKRQFAMKFTEHYKQLQEDFISDDHQRNISVTALSVQIFTVPTLARQLIEEG
SVIKVIIDTVMEMMREHLDSNNRFHFQGYNSDKFFRIQVIFHDLRYILISKPSAWTEELR
VKFLEGFRVFLSFLRCMQGMEEVKRQFGQHVEVEPEWEAGFTLQMQLRHILSMFQDWCSS
DEKVLLLAFQECYQVLMSCTNQPFRREPTDSYMCKQILHARPYKVSQEPVSIHLPVSRLL
AGLYVLLCKTGAVQYLPDFVDPAQLNFIEMTEQSLRCVVLAAQVCADMWRRNGLSLVSQV
YYYQDVKCRTEMFDKDIIMLQIAASKMDPDHFLMFILLRFELFDIFNGNCPSKDQEVLKQ
WNSLTEEMLYLIIIIVGERYIPGISDVTKEDVTMREVIHLLCVEPMAHSSLAKSLPEDES
NETGVESVITKVATFKKPGVSGHGLYELKKEWLKEFNPFFYHYSKPQHSKAEEAQKKRRT
QEGSDKALRPPVPPPFCPAFANIVRLLRCDVFIHILRRVMQKAVEDRSNRWTEPMIQRAL
HLVAQALLEEKAQLQSGSAKDVTFDFSLKAQKIGSEHGKSLFHFLTKMKSLPSLEAQKDM
ITWNLQMFEVVKSIREKSGPVASSPVDQSKPEELLGFHTSVQEKEKAERKRKAEAAKAHR
QKIMAQMSAMQKNFIESNKMLYDNVPESSSQSETTASLESVGMDMDDNRVAVGPQQGVCS
TDWEAMTCILCQEEQEVKAQAPAMVLTACVQRSTVLTQCRGKTLSAKEQYYPLFMSPDLA
VGTHTGSCGHVMHATCWQKYFEAVQNTTRNRLHTELLIDLENGEYMCPLCKSLCNTVIPL
IPVEPSKLNYESAELVGQHLTLARWIHVVLSRIRGLKATREAGSNREQGAEQATVFFEEG
QADFRSILSFGVQEPPKFSSSITEMLGVCAVTVHRVGLQTAPNDLCPYVPVMSWNTCAYT
IQAIESMLQDEGKALFGSLQNRQLAGLKAVVQFSSAQSLKNRQTVVQQHFADMLAVLLPV
SNVEDTPSILELDFFHLLVGLVLSIPVLYQEEAVDLQPSAISTAYNHLHLLHLVTMGHML
QVLLTSHDCAVSRGADEGDEARAAAEIYSIVSQHTDGLSSGVSGSTVAERVKRGILPFLR
CAALFFSCLTGVPPPEELFSIAESPESQLLVICSYLALPCNLFQLFQDHMDVMTPLIKRW
CENPAISRALKGEMHIIRYPCKINRLIDLPEDYSVLLNQASQFKCPNSSDDERKHPTLCL
LCGVMLCAQSPCCQVQLNGEDVGACTAHADTCGAGVGIFLRVRECEIVLMASKTRGSRYP
APYLDDYGETDPELVRGNPLHLSPERYRKLLNMWQQHCILEEIARSLEVLNVMFAFEWQM
L
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtcgcagagcagtgtactactgagcacgaaatggtgggaggcatcaaacaga
ggggctgcaatactcagctatttgggtgagaaggtcccccttctttactgcctggagaca
gagcaacaagatgaggagcaaaaggtggaagaacacctcctttatcctctggagtgcttt
ctttttggggaggacccccatgctggcctggaaaagctacagcagtgcgacagcggctca
tcttctcagcagtgtgggcgtgtctttaaagagggcgagacggtctactcctgcagagac
tgtgcaatagatcccacatgtgtactctgcatggaatgctttcagaaaagtgtgcacaaa
agtcatcgctacaagatgcatgcctcagcaggaggaggattctgtgactgcggagacttg
gaggcttggaagaccggaccgtactgctcccaacatgatcctggcacctcagtcccgatg
gaaacggatgagtgtacgttagattcaggccttcaggaacgtgctcagacgctgttccgg
acactgctgcattacactgcagatcttctggtttggaaggagaatgatgaactatcagag
gagctgaagccaaaagtcaaagaagacacctacttttgtgtgctctacaatgatgagcat
cactcatatgaccatgtcatttacacacttcagcgagctattggctgtgaccaaaatgag
gctcaaatatacacaactctcattgacaaagagggacggaaagcagtgaaaagaggcatt
ctgagatcctgtcagcaagcaaaagacagtatcaggcgtaactcagagcacattacccag
caaccgttgcgggtggagatccttcacactgctgtgatggctcaccagacctttgccctc
agactcggcacatggttccaaaaaatctttggatactcagttggctttaggcaggtgttt
tgccaggtggctttagagccaggcgttgacaacgataagctctgcctgatcagtcgagtc
atgctacatgatgccaaactttataaaggtgcccgcaaggtcgtccatgagttaattttc
agtagcttactaatggacacagaatacaagaggcagtttgccatgaaattcacagagcac
tataaacagcttcaggaggactttatcagtgatgaccaccaaaggaatatttcagtcaca
gctttgtctgtacagatcttcacagttcccactttggccaggcagttgatcgaggagggc
agcgtcataaaggtgattatagacacagtaatggagatgatgagggaacacctcgacagc
aacaatcgcttccactttcagggctataactccgacaagttcttccggattcaagttatc
ttccatgaccttaggtacattctcatcagtaaaccctcagcgtggactgaggaactgaga
gtgaagtttcttgaaggcttccgtgtctttcttagtttccttcgttgtatgcaggggatg
gaagaggtgaagaggcagtttggtcagcacgtggaggtggagccagagtgggaggcgggg
tttactcttcagatgcagctacgtcacattctctccatgtttcaggactggtgctcttct
gatgagaaggtcttgctgttggcctttcaggagtgttatcaggttttaatgtcttgcacc
aaccagcccttccgcagagagccaactgacagctacatgtgcaagcaaatcctccatgca
cggccttacaaagtctcccaggagcctgtctccattcacctgcccgtctctagactgctg
gctggtttatatgtgcttttgtgtaaaaccggagcagttcagtacctccctgactttgtg
gatcctgctcagctgaacttcattgagatgacagaacagtcactgcgctgtgtggtgcta
gcagctcaggtgtgtgctgacatgtggcgtagaaacggcctgtcactcgtcagccaggtg
tattattatcaggatgttaagtgcaggactgaaatgtttgataaggatattatcatgctg
cagattgctgcttccaaaatggacccggaccactttcttatgttcattcttttgagattt
gaactttttgatatttttaacggtaactgccctagtaaagatcaggaggtgctgaagcag
tggaatagtttaacagaggagatgctttacctgataatcatcattgtaggtgagcggtac
atacctggaatcagtgacgtgactaaagaagatgtgactatgagggaggttattcatctg
ctgtgtgttgaacccatggctcatagcagccttgccaaaagtctgcctgaagatgaaagt
aatgaaacaggagttgaatccgtcataactaaggttgccaccttcaagaaacctggagta
tcaggtcatggcttgtatgagctgaagaaggaatggttgaaagagtttaaccccttcttc
tatcattattccaaacctcagcatagtaaggcagaagaggctcagaagaagagaagaacc
caagagggcagtgataaagccctacgtcccccagtgccccctcccttttgcccagccttt
gcaaatatagtgcgtctgcttcgctgcgatgtcttcatccacattctcagaagagttatg
cagaaagcagtggaggaccgctccaaccgatggaccgaacccatgatccagagggctctg
caccttgttgctcaggcacttctagaggaaaaggcgcaattgcaatctggcagtgccaaa
gatgtgacctttgattttagtctgaaagcacaaaaaatcggttctgaacatggcaagtct
ttgtttcacttcctaaccaaaatgaagtctttaccgtcactcgaagctcaaaaagacatg
atcacatggaatttacagatgtttgaggtggtgaagagcattcgggagaaatccgggcct
gtagcttcatctcctgtagatcagagcaagccagaggagttacttggatttcacactagt
gttcaggaaaaagagaaagcagagcggaaaaggaaagcagaggctgctaaagcgcacagg
caaaagatcatggcgcaaatgtctgcaatgcagaagaacttcatagagtcaaacaaaatg
ctttatgacaatgtacctgagagctcaagtcagagtgaaacaactgcatctctagaaagc
gttggaatggatatggatgacaacagggtagctgtaggacctcagcagggtgtttgctct
acagactgggaggctatgacctgcattctgtgtcaggaggaacaggaggttaaagctcag
gcacccgccatggtactcacagcatgtgtgcagagatctactgttcttacccagtgccgg
ggcaaaacactctctgccaaagaacagtactaccctctatttatgtcccctgatctggct
gtgggcacacatactggcagttgtggacatgtgatgcacgccacctgctggcaaaagtac
tttgaggctgtgcaaaacaccactcgaaatcggctgcacacggagctgcttatagacctt
gagaatggagaatacatgtgtcctctctgcaagtctctctgtaacactgttattcctttg
atccctgtggagcccagcaaactcaactatgaaagtgctgaattagttggtcaacatctg
actcttgctcgctggattcatgtagtactttcccggatcagaggcctgaaagctacacga
gaagcaggcagtaacagagagcagggagcagagcaagccaccgtgttttttgaagagggt
caagctgattttagatccattctcagttttggagttcaagaaccgccgaagttctccagc
agcatcacagagatgttgggggtctgcgcagtgacagtgcacagggtgggtctgcagact
gcccccaatgatctgtgtccatacgtacctgttatgtcctggaacacctgcgcctacact
atccaagctatcgagagcatgctgcaggatgaggggaaagctctgtttggttcccttcag
aacagacagcttgctggactcaaagctgtggtgcagttctcatcagctcagagcctaaaa
aaccgtcagactgtagtacagcaacatttcgctgatatgcttgcagtcttgttgcctgtc
tctaatgtagaggacacaccatcaatattagaattggatttctttcatctactggtgggg
cttgttctgtcaatcccagtgttgtatcaagaagaggcagttgacctgcagccgtcagcg
atcagtacagcatacaatcacctccacctgttgcacctggtcactatgggacacatgcta
caggttctgctgacctcacacgattgtgctgtgagtagaggagctgatgagggagatgag
gctcgggccgcagcagagatttactctattgtgtctcaacacactgatgggttgagttct
ggtgtatctggctctacagttgcagagagagtaaagagaggcatccttcctttcctgcgc
tgtgctgcgctgttcttcagttgccttacaggagtgccccctccagaggaactattcagt
attgcagaatctcctgagagtcagttgctagtgatctgtagttaccttgccttgccctgc
aacctgtttcaactgtttcaggatcacatggatgttatgacacccttaataaagaggtgg
tgtgaaaatccagccatatccagagcacttaaaggtgaaatgcacattatcaggtatcct
tgcaaaataaacaggttaatagatcttccagaggactatagcgtgctgctgaaccaagca
agtcaatttaaatgtccaaactcatcagatgatgagcgcaaacacccaactttgtgtctg
ctctgcggggtcatgctgtgtgcacagagtccctgctgtcaggtgcagctgaacggagaa
gatgtgggagcttgcacggcccacgctgacacctgcggggctggtgtgggaatatttctc
agggttagagagtgtgagattgtattgatggccagtaagacccgagggtcccgatatcca
gctccttaccttgatgactatggagaaacagatccagagcttgtgcgtgggaaccctctg
cacctgagtccagagcgttaccgcaagttgctcaatatgtggcagcaacactgcatcctg
gaagaaattgcccgtagtctggaggttctcaacgtcatgttcgcctttgagtggcagatg
ctctga
DBGET
integrated database retrieval system
