Misgurnus anguillicaudatus (oriental weatherfish): 129417245
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Entry
129417245 CDS
T09481
Symbol
nrde2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129417245 (nrde2)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129417245 (nrde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
Suf
TPR_19
TPR_12
Motif
Other DBs
NCBI-GeneID:
129417245
NCBI-ProteinID:
XP_055027765
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All DBs
Position
7:complement(31326053..31353462)
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AA seq
1127 aa
AA seq
DB search
MALFPSCAEISNTNSSVGDKGDLEWLSNKSFSTDALKTRQRATERAQPETEELTHASQQT
CPEREDSHGRSKKRKKEKKKKRKKEKKSKDDSGSSGSESDTIYPSDLLKQENTDRHEAQV
RVSGAFMWLDDLQSPTDSPFCIDRRADRANWEYKSLYRGDIARYRRKGGSCLGLDFRRQA
VSWVEGDPKKRADRKHERYFSSSTRQLLRSDGQVVLPVTGATNSDSYIQLPACTDEQDSS
TQAPVSWLNPLGIYDPGTSLWLEGKGQPEVKGDQQGVDSAQSTSSSQITGRVEEFNRKLR
ENPTDIQMWLDFVHFQDELAFGSGSFSAPKDSDGDMRKMSLRAVLEKKLSIMDRAVESNP
GNVDLKLEKLRLCKELWEPAVLLKEWKKLVFIHPNSAPLWRKYLLFTQSNFSTFSVSKVN
SVFGKCLSTLSAVQDGSMVSHPPLPGTQEDILEIFLQQCHFLRQAGHTEKAVCLFQALLD
FTFFKPDSVKDLPTRQQVEFFEPFWDSGEARIGEREARGWKAWMLQQQRGGWVIPPEQDD
DDDDEQEDPEIKDKTWPKWKIWLDVETSREANHWLPWRPDKTKGQSEEDCEDPDRQVLFD
DIGPSMIRVDRPDLQLRLILAFLQFLGLPTSSGKVSIPTDSNVLLDDLSLLEEGPDTERP
LTSYDLPATGMSAVGHMTFLSDRRKQPGLCRAGEEFLQNVLERTLPLVSARDRAAVALCW
LQYEKLKVLRCLRSGNKKRLKAQGKRSKRLAKRLLKEPENRGSLALWREYAHLEWLLGNL
EEARKVFDTALGTGVSRGLNDPALCNLSLLYAQLEVEQASKSGPVPTSSPAVYILAKLAE
GATYTPFSGQINPVAILKARKAYEQAFLNLNADSKKWTSSLVGCFGLFQYLTMGIDAADA
VYGQARQRAVNSDATRRRDWESIAVQHVALLRHHTSTNVFPLSRLRLALTDALSLLPSSA
PLWHLYLQTENRYHSAGRTRRFFHSVAKKVESVVPYLFAITAEQRLKQLLDSVQSSSIPG
DALPILPENGLSNRIRCLFEAAAATEHGAHCPLLWRMYLNFMVCDGNAERGSGVFYKALQ
EVPWVKGLYMDAVQLFPERVQEFLDLMTEKELRLRVPMEEVDILLED
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtttccctcctgtgctgaaatatcaaacactaacagctctgttggagataaa
ggagatctggaatggctgagtaataagagcttcagcacagatgctttaaagactcgccag
cgtgccacagagagagcacaaccagagacagaagaactgacacacgcgagtcagcagaca
tgcccagagagggaagacagccatggcagatcgaagaagcggaagaaagaaaaaaagaag
aaacgaaagaaggagaagaaaagcaaagatgattctggaagcagtggttcagaatcagac
accatctacccgagtgacctgttgaaacaggaaaacactgacaggcatgaagctcaggtt
cgggtgagcggggcttttatgtggctggatgacctccagtcccccaccgactcccccttc
tgcatcgacaggagagcggaccgtgccaactgggaatacaaatctctctataggggagac
atagccaggtatagaaggaaggggggctcatgcctaggtttggacttcaggagacaggcc
gtaagctgggttgaaggtgacccaaagaagcgggcagacaggaaacacgaacgatatttc
tcttcttctacacgtcagctgctccgctcggacggccaggtggttttacccgtgaccggg
gccaccaactccgattcctacatccaacttccagcctgcaccgacgagcaggactcttct
acccaagcacctgtatcatggctcaatccactgggcatctatgaccctggcacatctctg
tggctggaaggcaagggccagccggaggtcaagggtgatcaacagggcgttgacagcgcc
caaagtaccagcagcagccagattactggacgcgtggaggagttcaacaggaagttacga
gagaatcctacagatattcagatgtggctagacttcgtacactttcaggatgaactggct
tttggttctgggtctttctctgcgcccaaggacagtgatggtgacatgaggaagatgtct
cttcgtgccgtgctggagaagaagctgtcgatcatggacagggcggtggagagcaaccct
ggcaacgtggatttgaaattggagaaacttcgcctatgcaaggaactgtgggagcctgcg
gtcctgctgaaggagtggaagaaactggtgtttatccacccgaacagcgccccattgtgg
aggaagtatctgctttttacacagagcaatttcagtactttctctgtgtcaaaggtcaac
agcgtgttcggaaagtgtctgagcacgctcagcgcagtgcaggacggcagtatggtgtct
caccctccattaccaggcacacaggaagacattttagagatctttcttcagcagtgtcat
ttcctacgacaggcgggtcacactgagaaagccgtgtgtctcttccaggccctgctggac
tttactttctttaagccagacagtgtgaaagacctgcccaccagacagcaggtggagttt
tttgagccgttttgggacagcggagaggctaggatcggggagcgggaagctcgtggatgg
aaagcatggatgcttcaacagcaaagaggaggatgggtgattccacctgagcaagatgat
gatgatgatgatgaacaagaggaccctgagatcaaagacaaaacctggcccaagtggaag
atctggctggatgtggagacgtcacgtgaggcgaaccactggttaccatggagaccagat
aaaaccaagggccaatcagaagaagactgtgaagatcccgacaggcaggtcttgtttgat
gatatcggcccttctatgattcgtgtagacaggcctgatctccagctgcggttgatcctg
gccttcctgcagttcctcgggctgcctacatcatccggaaaggtctccatacccactgac
tcgaacgttctgctggatgacctctctttacttgaagagggacctgacacagagcgacct
ctgacctcttatgaccttccagcgaccgggatgtctgcagtgggtcacatgacgtttctg
agtgaccgcaggaagcagccagggctatgtagggcaggggaggagtttctgcagaacgtc
ctggagcgaacccttccactcgtctctgcacgggatcgggctgccgtcgctctctgctgg
ctacagtatgagaaactaaaggtcttgagatgtctacgtagcgggaataagaagcgtctg
aaggctcaggggaagcgtagtaaacgtctggccaaacgactgctaaaggagccagagaac
agagggagcttggcgttatggagagagtacgcccatctggagtggcttctgggtaatcta
gaagaggctcgcaaagtatttgacactgccttgggtactggcgtgtccagaggtcttaat
gaccccgccctctgcaacctcagccttctctacgcccagttagaggtagagcaggcctcg
aagagcggaccagtacccacttcttctccggctgtatacatcctcgctaaattagcggag
ggtgctacatacacccctttctcgggccaaatcaacccagtggccatactgaaagctaga
aaggcctacgagcaagctttcttgaacttgaatgcagacagtaagaaatggacatccagc
ctggtcggatgttttggacttttccagtacctgacaatgggaatagatgcggctgatgcc
gtgtacggtcaagccaggcaaagagctgtgaattcggatgcgactcgcagaagggattgg
gagtctattgccgttcagcacgtggccctgctgcggcaccacaccagcaccaatgttttc
cctctgtcccgactccgattggctcttaccgatgccctttcgttactgccctccagcgcc
cccttgtggcatctctacctgcaaacagagaaccgttatcacagcgcgggccgtacgcgc
aggttcttccacagtgtagctaagaaagttgaaagtgtcgtgccgtatctgttcgccatc
actgcggagcaaagacttaaacagctgctggactcggtgcagagttctagtattcctgga
gacgctctccccatccttccggaaaatggccttagcaatcgtatccgctgtctgttcgaa
gcagctgcggctacagaacatggagctcactgtcctttactctggagaatgtatctgaac
tttatggtttgtgatgggaatgctgagaggggcagtggggtcttctataaagctcttcag
gaagtgccatgggtaaagggtttgtacatggatgcagtgcagctttttccagaacgcgtg
caggagtttttagatctaatgactgagaaggagttgcgtctaagagtacccatggaggaa
gtggacatcttgctggaggactga
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