Misgurnus anguillicaudatus (oriental weatherfish): 129417380
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Entry
129417380 CDS
T09481
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03013
Nucleocytoplasmic transport
manu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129417380 (srrm1)
03015 mRNA surveillance pathway
129417380 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129417380 (srrm1)
03041 Spliceosome [BR:
manu03041
]
129417380 (srrm1)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129417380 (srrm1)
Spliceosome [BR:
manu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
129417380 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
129417380
NCBI-ProteinID:
XP_055027991
LinkDB
All DBs
Position
7:complement(32615013..32625051)
Genome browser
AA seq
939 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITQRVNEIL
GFEDDVVIEFVFNQLEEKNPDAKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKIDDDKREKENKERAQSRSPKRRKSRSPVKRDRKA
SPSRSPRRKPSPPASPPSSPPNQREEPKEEPDQLESSKPEPLIQEASSTSDLVAEMKPDS
VSEVVKESSPEKTSKSEDKPKPRDKDREKDGRRDRPRHRSRSRSPRSRRRPRSRSRSFSP
RRRPSPRRRISPRRRSPPRRQPPPRHRRSRSPVRRRRSRSRSSSGSSSSRSPHKRPGKRG
SATPPRKLPRRSDLSSPPRRRGRSPSGPDTSPSAARNRTGGRNDTHSPPKPPRRSDVSDS
EEEKLGDGSMADSVQQRRQYRRQNQKSSSDTGSSSSSEDEGPRQKNRGAAARNGDVRRRR
SHSPGSPRRRHREASPRKRRSPSPAFRRHRSPSPARRRRSPSPPPRRRSPSPPTRHYSPP
IQRRYSPSPLPAQKRRPSGSPPPRRRGSPSPPVSKRRGSPSPPVSKRRGSPSPPVSKRRG
SPSPPVSKRRGSPSPPVSKRRASPSPPVSKRRGSPSPPLSKRRGSPSPPVSKRRASPSPP
VSKRRPSPSPPVSKRRASPSPVAKRRSSRSPKRTRGSSPGKRRTPPSSASPPPRHRRSSP
NPPAHQRGRDTRSSPPSHSSRVSSSPQARYGPSGSSPQRARRQASPSHGTRPIRRVSRTP
EPRKPQRDSQSPQPVRRQVSRSPSASPPPAAPKRTASVSPHSASRSPPPPAKKNSSGSQS
PSPNKNSDVEGGKKKKKKKEKKHKKEKKHKKHKKQKKEKSGEEKIEAAIGVPEQEAEPDS
DQKKESDSEVEDSLDDLEKHLREKALRSMRKAQLSPSSQ
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggtttttccgcggcaccagtgcggagcaagataaccgcttcagcaacaaa
cacaagaagctgttgaagcagctgaagtttgcagaatgtctggagaagaaggtggacatg
tccaaggtcaacctggaagtcatcaaaccctggatcacccagcgcgtgaatgagatcctt
ggctttgaggatgatgttgtcattgagtttgtcttcaaccagctggaggaaaagaatcca
gatgcgaagatgatgcagattaatttgactgggtttctgaacgggaagaacgctcgggaa
ttcatgaaggacctctggccgctgttgctaagcgctcaggagaacatcgctggtattccg
tctgccttcctggagcagaagaaagaggaaatcaaacagagacaaattgaacaggaaaaa
ctagcctctctgaaaaagatagatgacgataaaagagaaaaggagaacaaggagcgagct
cagtccagaagccctaaacggaggaaatctcgttcccctgtgaagcgggaccgtaaagcc
agcccttcccgctctcctcgtcgaaaaccaagtccacccgcctcaccgccttctagtccg
cccaatcaaagagaagagccaaaagaagaaccggaccaattggagagctccaaaccagaa
ccactaattcaggaggcttcttctaccagtgatctggtggctgagatgaagccagactct
gtgtctgaggtggtgaaagagtcgtcccctgaaaaaacctccaaatcagaagacaagccc
aaacctagagacaaggacagagagaaggacggacgcagagatcgcccacgtcaccgctct
cgttcccgatcacctcgatctcgcagacgacccagatcacggtccaggtcgttctctcct
cgccgcagaccgagtcccaggagacgaatctctccgagacgccggagcccccctagacgc
cagccaccccctagacacagacgcagccgttcacctgtccgcaggcggcgctcacgttcc
cgatcctcttcaggcagctcttcctctcggtctccccataaaagaccaggtaaacgtggg
tcagctacccctcccagaaaacttccacgtcgttcggatctatccagtccacccagaaga
agaggccggagcccctcaggtccagacacaagcccttcagctgcgagaaacagaactggt
ggaaggaacgacactcattctcctccaaaaccacccagacgatccgatgtatcagattct
gaggaggagaagttgggcgacgggtcaatggcagattctgttcagcagcgacgtcagtat
cgcagacagaatcagaaatcctcttcagacacagggtcatcctcttcctctgaagatgaa
ggcccaaggcagaagaacagaggcgcagctgctaggaatggtgatgtcaggagacggcgg
agccattcacctggctcaccacggagaaggcacagagaggcatccccaagaaaaagacgt
tccccatcacctgctttccgtagacatcgctctccatctccagctcgtcgccgcaggtcg
ccctctcctcctccaagacgcagatctccatcccctcctactcggcactactctccccct
atccagcggcgatacagcccctctccccttccagctcaaaagagacgcccatcagggtct
ccccctcctaggcgcagaggttctccatcaccacccgtgtccaagcgcagaggttctcca
tcaccacccgtgtccaagcgcagaggttctccatcaccccccgtctccaagcgcagaggg
tctccatcaccacccgtctccaagcgcagaggatctccatcaccacccgtgtccaagcgc
agggcatccccatcaccacccgtttccaagcgcagaggttctccatcaccacccctgtcc
aagcgcagaggttctccatcaccacccgtgtccaagcgtagggcatccccatcaccaccc
gtgtccaagcggaggccgtccccatcgccgcccgtgtccaagcgcagggcatctccctca
ccagtagccaaacggcgctcctctcgctcccccaaacggactcgtggtagtagtccagga
aagaggcgcactccgccctcttctgcttcaccaccaccccgccatcgcagaagttctccg
aatccccctgcacaccaaaggggcagggacacccgttcctctcccccttcccattcttct
cgagtgtcttcgagtcctcaggctcgatatgggccttctggttcctccccgcaacgagca
agacgtcaggcgtcgccgtctcatggcacaagacccattcgaagggtctcccgcacacca
gaaccacgcaaaccacagcgagattctcagagcccccagccagtaaggaggcaggtgtct
cgttcaccatccgcttctcctcctccggcagcaccgaagagaactgcttcagtctctcct
cactctgctagtcgctccccacctccacctgcaaagaagaacagcagtgggtcccaaagc
ccatcacctaacaagaactctgatgtagagggtggaaaaaagaagaaaaagaagaaggag
aagaaacacaaaaaggagaagaaacacaagaagcataagaagcaaaagaaggagaagagc
ggagaagagaaaattgaagcagctataggagtccccgaacaggaggcggagcctgattcc
gatcagaaaaaggaatcagacagtgaagtagaagacagtttggatgatctggagaagcac
ctgcgtgagaaagctctccggtccatgaggaaggcccagttgtctccgtcttctcaatga
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