Misgurnus anguillicaudatus (oriental weatherfish): 129417432
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Entry
129417432 CDS
T09481
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129417432 (samd4a)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129417432 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
129417432
NCBI-ProteinID:
XP_055028068
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All DBs
Position
7:1876143..1933341
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AA seq
679 aa
AA seq
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MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLADCTELHVLER
EANNPVLISQWQTEPKERVISLVLTHLPLLKPGNAEAKVEYMSLLPKILSHTIEHGRHLE
ESRQLLSYALIHPATSLEDRANLALWLNHLEERAAARGAGDSLERAPSSHHGQPPHLYTH
HQRYGSDDRLNGWQSSRGSGLGSWQQQPQQGCENGHLSLYPSSSVPSTINAVGTGSGTNT
MLTGGQHSPLRRSVSLTPPMSGGSNQPLGHGWLSQEDLRPRGPAPDHAPLSPQSSVASSG
SGGSEHLEEHAAVRSTFHEEGSGMRDVPSWLKSLRLHKYSALFSSMTYDEMMSLTEQQLE
AQQVTTGARHKIIISILKLKDRQNMLRCLEKDILEGGNLRAPLQELHQMIQTPIKACSTE
ESSQRHPLSAEGKSTMASSHLGGGETESSSTVIAEGDIPAQFTRVMGKVCTQLLVSGSDE
ENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQVQFRSISRKTLLDLTGPRRSSRYGQ
SNSLPTSGCVGSGVPTRRNLRQYQMRNLSCVRPLLGTTGLFGPTPRSGSSTPTGLKQGRQ
GLWFANPGGSNSMPSRTHSSVQRTRSLPVHTNPQTLAMFQQTDLQVPVTEPDINNRLESL
CLSMTEHALGDGVDRTSTI
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgtgaccaagtgggagtcctcgccggttggtttaaggggtggaatgaatgc
gagcagacggtggcgttattgtcgctcctcaagcgcgtcagccgtacccaagcgcgcttc
ctgcagctctgtttggagcattccttggccgactgcaccgagcttcatgttctggaaaga
gaagccaataacccagtgttgataagtcagtggcagactgaaccgaaagagcgggtcatc
tctctggttctgacccatctgcctctccttaaaccgggcaatgcagaggccaaggtggaa
tacatgagtctgttacccaaaatattgagccacaccatcgaacatggccggcaccttgag
gaaagcaggcagcttctgtcgtacgctctcatccacccggcgacttctctcgaagaccgg
gcaaaccttgccctttggctcaaccacctggaagaacgggcggccgcccgaggagctgga
gactccttggagcgggcgccttcatctcatcacgggcaacctccgcacctttacacccac
caccagcgctacggctcagatgaccgtcttaacggctggcagagctcaaggggctccggg
ctgggaagttggcagcagcagccgcaacagggttgtgaaaacgggcatctttcgctgtac
ccatcatcctctgttccttccactatcaacgccgtaggtacaggcagtgggaccaacaca
atgctgacgggcgggcaacacagtcctctgaggcgttcggtgtctctgacccctccgatg
agcggcggatcgaatcagccgctggggcacggctggctctctcaggaggacttgcgtccc
cgcgggccggcccctgaccacgcccctctctctcctcagagcagcgtggcgtcttcgggc
agcggaggcagcgagcatctggaggaacacgctgccgttcggagtacattccatgaggag
ggaagcggaatgagagatgttccatcatggctgaagagtctgcgtctccataagtattct
gcactgttttcctccatgacctatgatgagatgatgtcactcacagagcagcagctggaa
gctcagcaagttaccacaggggcgcgacacaagatcatcatcagtattctgaagctgaag
gacagacaaaatatgctgcgctgtctagagaaggacatactggagggagggaatttacgc
gctcctttacaggagctccaccagatgatccagacacccattaaggcctgcagcacagaa
gagtcgtcacagcgccacccgctgagcgctgaagggaaaagcaccatggccagttctcat
ctcggcggaggagagacggaaagcagctcgacggtcatagccgagggggacatacctgct
caattcacccgtgtcatgggcaaagtttgcacacaactccttgtctccggatcagatgag
gagaacattagttcctacctacagcttattgataagtgccttatccacgaggccttcacg
gagacgcagaagaagaggttgttgtcatggaaacagcaggtgcaggtgcagtttcggtca
atctcgcggaaaactctgctggacctaacaggacccagaagaagtagccgctacggccaa
tccaactccctcccgacctctggctgcgtgggcagcggcgttcccacccggaggaacctg
cggcagtatcaaatgagaaatttgtcttgcgtgagaccccttttgggcaccaccgggctg
ttcggaccaacccccaggagtggcagtagcacaccgaccggcctgaaacagggaagacag
ggtttgtggtttgccaatccggggggcagcaacagcatgcccagccgcacccacagctca
gttcagaggactcgatcgctccccgtccacaccaacccacaaaccctggccatgttccag
cagacagatttgcaagtgcctgtgactgagcctgacatcaataaccgtttggagtcttta
tgtctcagtatgacagaacatgctctcggagatggtgtcgatcgaacttcaaccatctga
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