Misgurnus anguillicaudatus (oriental weatherfish): 129418170
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Entry
129418170 CDS
T09481
Symbol
hmbox1a
Name
(RefSeq) homeobox-containing protein 1a isoform X1
KO
K24885
homeobox-containing protein 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129418170 (hmbox1a)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129418170 (hmbox1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HTH_31
DUF494
CUT
HTH_26
HTH_37
NOC3p
Motif
Other DBs
NCBI-GeneID:
129418170
NCBI-ProteinID:
XP_055029080
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Position
7:complement(2760697..2782084)
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AA seq
446 aa
AA seq
DB search
MSHYTDEPRFTIEQIDLLQRLRRSGMTKQEILHAMDTLDRLDREHVEKFGHRHAHGGNGA
GGVAGNASNSTTSSNSCTTSSNNLTASTSRTSTATQTSYRGNSLSPSHSNSYDTSPPPAA
PTPMPVVVPTIQNGRDVLAAMPNGKLSPPRFVVSNASARAFGFELPDEEVDVDDKVEELM
RMDSAIIKEEIKAFLGTRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQ
LEKTTPGATLAMRPNPMALEDIVEWRQTPPPISSTPGSFRLRRGSRFTWRKECLAVMESY
FNDNQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEA
AILESHGIDVQSPGGHSNSDEIDGNDYGEQVPADQVLGMDDATGPSEHQDPIALAVEMAA
VNHSILALARQGGATGGIKTEVLDDD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcccattatacagatgagcctcgttttaccattgagcagatcgacttgctgcagcgt
ctgcgtaggagtggcatgacgaagcaagagatcttgcatgccatggacactctcgaccgg
ctggaccgcgagcacgtcgagaagttcggccatcggcacgcacacggcggaaacggggcg
gggggcgtcgccggtaatgccagcaactccaccacctcttccaactcctgcactacctcc
tctaacaacctcacagcctctacgtcgagaacctctacggccacgcagactagttaccgt
ggcaacagcctctccccgtcccatagcaacagttacgatacctccccgcctcccgcggcc
cccacccccatgcctgtagtggtgcccacgatccaaaacgggcgggacgtcctcgctgcc
atgcccaatgggaaactttctccacctcgcttcgtagtgagtaacgcctccgcacgggcc
ttcgggttcgagctccctgatgaggaggtggacgtcgatgacaaagtcgaggagctcatg
agaatggacagcgctataattaaagaagaaattaaagctttcttggggacccggcgaata
tcacaggctgtcgttgcccaagttacaggtatcagtcaaagccgtatctctcattggcta
cttcagcagggttcagacctcagtgagcagaagaaaagagctttctaccgctggtatcaa
ctggagaaaactacacccggtgcgacgctagcgatgcggcccaaccccatggcactggag
gacatagtggagtggcgccaaactcctcctcccataagcagcacgccgggcagctttcgg
ctgcggcgcggcagccgcttcacctggaggaaagaatgtctggcggtgatggagagttat
ttcaatgacaaccagtatcccgatgaagccaaacgagaggaaattgccaacgcctgcaat
gcagtaatacaaaaaccagggaaaaagctttcagatctcgagcgcgtcacatcgctgaaa
gtttacaactggtttgccaacagacggaaggaaatcaagaggagagccaacatagaagca
gcaatcctggaaagtcatgggattgatgtccagagcccaggcggtcattccaacagcgat
gagattgatggaaatgactacggtgagcaggtacctgctgaccaggttctgggaatggat
gatgccaccggaccaagtgaacaccaggaccctatagctttggctgtggagatggcggcc
gtcaatcacagcatcctggcgctggcgaggcagggcggagccaccggtggcatcaaaaca
gaggtgctggatgatgattaa
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