Misgurnus anguillicaudatus (oriental weatherfish): 129418613
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Entry
129418613 CDS
T09481
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03420
Nucleotide excision repair
manu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129418613 (ddb1)
09124 Replication and repair
03420 Nucleotide excision repair
129418613 (ddb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129418613 (ddb1)
03400 DNA repair and recombination proteins [BR:
manu03400
]
129418613 (ddb1)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
129418613 (ddb1)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
129418613 (ddb1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
129418613 (ddb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
129418613
NCBI-ProteinID:
XP_073709393
LinkDB
All DBs
Position
15:complement(2992583..3031463)
Genome browser
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGENKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVQFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSESGRD
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFFCGNVAHQQLIQITSASVRLVT
QDSKALVSEWTEPQGRNISVASCNSTQVVLAVGRVLYYLQILTGELKQISSTEMEHEVAC
LDITPLGETGHESSICAVGLWTDISARLLKLPCFSPLHKEMLGGEIIPRSILMTTFEGSH
YLLCALGDGALFYFGLDIQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PKRICYQEVSQCFGVLSSRVEMQDASGTTSAVRHSASQQALSSSMSSSKLFPSSTAPHET
SFGEEVEVHSLLVVDQHTFEVLHAHQFLQNEYALSMVSCKLGRDPAVYFIVGTAMVYPEE
AEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGSFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFSHGSLVLQNLGES
STPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTER
KTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacaactacgtggtgaccgcgcagaagcccactgcagtaaatgcttgtatcacg
ggtcacttcacatcagccgaggatttgaacctattaatagcgaagaacacgcgtctggag
atctatgtggtgactgctgagggacttcggcctgtcaaagaggtcggcatgtatggcaag
atcgcagtgatggagctctttagaccaaagggagaaaataaagatcttttgttcattttg
acggcaaaatacaacgcctgtatcttggaatacaagcagaatggagacagcattgacatc
atcactcgtgcacatggaaacgttcaggaccggatagggcgtccatcagagacagggatc
attggtatagtggatccagagtgtcgtatgattggcttgcggctctatgatggcctgttt
aaggtcattccactggaccgtgataatcgtgagctgaaagcttttaacatccgactggag
gagctgcaggtcatagatgttcagttcctgtacggctgccaggcgcccactgtctgcttt
atatatcaggatcctcagggcagacatgtgaagacatatgaggtttctctcagagagaaa
gaattcaataaaggaccctggaaacaggaaaatgttgaagcagaggcatcaatggtcatt
ccagtccctgagccatttggtggagctataattattggacaagagtcaatcacttatcac
aatggagacaaatacttagccattgcacctccgactattaagcaaagcaccatagtgtgt
cataatcgtgtggatcccaacggctcacgctatctgctgggagatatggagggcagactg
ttcatgctgttgttggagaaagaagaactgatggatggagctgtggtgctcaaagacctg
cgagtggagctcttaggagagacctctatcgctgagtgtctgacatatctggataatggt
gtggtgtttgtgggttccaggcttggagattctcagttggttaagctgaatgtggacagt
aatgatcagggttcatatgttgctgttatggagacgtttactaacctagggcctatagtg
gacatgtgtgtagtggaccttgaaagacaaggacaaggccagttggtgacgtgctctgga
gcatttaaagaaggttcgctcaggattattcgcaatggcataggaatccatgagcatgcc
agcattgacctgcctggaatcaaaggactttggcctctccgttcagagtcaggcagagac
actgatgacatgctcgtgctgtcttttgtgggtcagacccgagtcctgatgctgagtgga
gaggaggtggaggagaccgagcttccaggctttgtggacaatcagcagacgtttttctgt
ggaaatgtggcacaccagcagctcatacagatcacatcagcgtccgtgcggttggtcact
caggacagtaaagcgttagtgagtgagtggaccgagcctcagggcaggaacatcagcgtg
gcgtcctgtaacagcacacaggtggtgctggctgtggggcgggtcctttattatcttcag
atccttacaggagaactcaaacagatcagttctacagagatggagcatgaggtggcgtgt
ttggacatcactcctctgggtgagacaggacatgagtccagtatctgtgctgttggcctt
tggacagacatctcggcacgactgctgaagttaccctgcttcagtccacttcataaagag
atgttgggtggagagatcatacctcgttctatcctcatgacgacatttgagggaagtcat
tacctgttgtgcgctcttggagacggggcgctcttttattttggactggacattcagaca
ggtgttttaagtgaacgaaagaaagtgactcttggcactcagcccacggttctgcgcaca
tttcgatctctctccacatcaaatgtgtttgcctgttcggacagacccaccgtcatttac
tccagcaaccacaaactggtcttttctaatgtcaacctgaaggaggtcaactacatgtgc
ccgcttaactctgagggctaccctgacagtttggctctggccaataacagcactctgacc
atcggcaccattgatgagatccagaaacttcacatccgaactgtacccctctatgagtca
cccaagcggatttgttatcaggaggtgtctcaatgttttggagttttgtccagcagagta
gaaatgcaggatgccagtggaaccacatcagctgtgcgacacagcgctagtcaacaggcg
ttgtccagcagcatgagctccagtaaactttttcccagcagcaccgcacctcatgagacg
tcctttggagaggaagtggaggttcacagtctactggtggttgatcagcacacgtttgag
gtgctacatgctcatcagttcctgcagaatgagtacgctttgagcatggtctcctgtaag
ctgggcagagacccagctgtttatttcatagttggcacagcaatggtgtatccagaagag
gcggagcctaaacagggccgcatcatcgtctttcactatacagatggtaaactgcagacg
gttgcagagaaggaggttaaaggagccgtttactccatggtggagtttaatggcaaactt
ctggccagcatcaacagcactgtgcgtctctatgaatggacagcagagaaggagctgcgt
actgaatgtaatcattataataatattatggctctgtatctgaagactaaaggagatttt
atactggtgggtgacctgatgcgctccgttctcctgttggcctataaacctatggagggc
agttttgaggagattgcccgggattttaatccgaactggatgagtgccgtagagatctta
gatgatgacaactttcttggagcagaaaatgcgtttaatttgtttgtctgccaaaaagac
agtgcggcaactacagatgaagagagacagcacttacaggaggtgggcttgtttcatctg
ggagagtttgtcaatgtgttttcgcatggatctttagtcttacagaatctgggcgagagt
tcgactcctacacagggttctgtgctctttggcacagttaatgggatgatcggtttggtg
acgtcactatcagagggatggtatagtttactgctggacctccagaacagactcaacaaa
gtcatcaagagtgttggcaagatcgagcacagtttttggaggtcatttcatacagagcgc
aagactgagcaagccacaggattcatagatggagatcttattgaaagctttctggatttg
ggtcgtgccaagatgcaagaggttgtgagcacactccagattgatgacggtagtggaatg
aagcgggaagctacagtggacgaggttattaagatcgtggaagagctgacgcggatccac
tag
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integrated database retrieval system
