Misgurnus anguillicaudatus (oriental weatherfish): 129418749
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Entry
129418749 CDS
T09481
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
manu03009
]
129418749 (ighmbp2)
03012 Translation factors [BR:
manu03012
]
129418749 (ighmbp2)
Enzymes [BR:
manu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129418749 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
129418749 (ighmbp2)
Ribosome biogenesis [BR:
manu03009
]
Eukaryotic type
Other ribosome biogenesis factors
129418749 (ighmbp2)
Translation factors [BR:
manu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129418749 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
Viral_helicase1
DEAD
ResIII
nSTAND3
UvrD-helicase
Helicase_RecD
AAA_22
T2SSE
AAA_16
PhoH
Flavi_DEAD
SRP54
AAA_31
AAA_25
Zot
NPHP3_N
IstB_IS21
AAA_7
AAA
Herpes_ori_bp
SLFN-g3_helicase
ATPase
UvrD_C_2
AAA_33
AAA_5
ABC_tran
Motif
Other DBs
NCBI-GeneID:
129418749
NCBI-ProteinID:
XP_055029591
LinkDB
All DBs
Position
15:22829967..22838661
Genome browser
AA seq
1003 aa
AA seq
DB search
MEVEDFVSKTLELLQEEREAELEETRAWQENLSPKNLQQKGVYLSKLQIGSQHTGMYGRL
LVVFEPRKCIGPSVLPSNTFGPGDIVGLYQSESQGQQSQLGSGVVTRATQTSLTVAFDDT
QDGINLDRDGLYNLMKLANDVTYRRLTNALKSLNGYGSGPASHLISVFFGYSEPGTISHQ
NALEFSNTGLDDSQKEAVAFALSQKDVAIIHGPPGTGKTTTVVEVILQAVKQEQKVLCCA
PSNVAVDNLVERLVKSKVKVLRLGHPARLLESIQKHSLDAVLAHSDNTNVISDIRKDMDK
AFSEMKKARDKGQRSNLRREIKDLRQELRSREDTAITQILKRADVILATNTGASNDGPLK
HLPNDHFDLVVIDECAQALESSCWIALLKAHKCILAGDYKQLPPTIKSQSAASKGLSVSL
MERLIKKYGDSVVRMLTTQYRMNSAIMQWASEEMYQGKLIAHHSVEKHLLRDLSGVADVE
ETRIPLLLIDTAGCGLSEMEDTDEQSKGNQGEVDIVALHIKALTEAGVQVKDIAIIAPYN
LQVDLLREKLSCKYAELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVT
RARRQLTVVCDSQTVRNHDFLKSLVVYMTEHGEVRTGFEYLEDCVPQNYTRDGKDKQRGA
KDASSTKQKSKNQGKKSEQEHEKNANYRESQDIVQSGQQNKQSKTNNLPHAKPRDAEQTQ
NKRQEIKEQLLNFLKDQNQNELQFSSSLNSHERMLVHELSEELGLKHESQGEGKNRRITV
SRPPAAPEIPKKEPKPRPADVTARAVVEPHAEKSQNEASQSPVDLKSLHLERMRREMEKR
EEKKQQKSMRLDPDLSTSKKQTVKKSKGTAKGGTKMKAGAVDIAAAAAADDDFDALIDAV
VKADSVCAFVKCKASVLTLGQLCIHCNRQYCLSHHIPEVHGCGDKAKSQARMRISKEGVL
YAGSGQKDKSMDPNKKAYLQRKFDSKLKDMASQRKPKAKDKEN
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgaagacttcgtttccaagacactcgagcttctgcaagaggagagagaagcg
gagttagaagaaacacgggcatggcaggaaaatttatcccccaaaaatttacaacaaaaa
ggagtgtacctttctaaattacagataggaagccagcacacgggcatgtatgggaggctt
ttagtagtatttgaacccaggaaatgtataggaccatcagttctccccagtaacacattt
ggacctggtgatattgtcggtctgtatcaatcagaaagtcagggtcagcaatctcagttg
ggctcaggagtggtgacacgtgccactcagacgtccctgacagtggcttttgatgacacg
caagatggtattaatttggacagagatggactctacaatctgatgaagttggcgaatgat
gtgacatacaggcgactcacaaatgccttaaagtctttaaatggatatggcagtggtcct
gcatctcacctgatcagcgtcttctttggttactcagagccagggacaatatcacatcaa
aatgcattggaattcagcaacactgggttagatgattctcaaaaggaagccgtggctttt
gcactttctcaaaaagatgttgcaatcatacatggaccaccagggaccggcaaaaccaca
acagtggttgaagtaatcctgcaggctgtgaaacaagaacaaaaggtcctttgctgtgct
ccttctaacgtggctgttgataacctggtggagcgcctggtgaagagcaaggtcaaggtt
ttaagattgggtcacccagctcgtcttcttgagtccatacagaaacactcattggatgct
gtacttgcacacagtgacaacactaacgtcatttctgatattcgcaaagacatggacaaa
gcttttagtgaaatgaaaaaggcccgtgataagggccagcggagcaacctgagacgggag
attaaggatctgcggcaagagctgaggtccagagaggatacggctatcacccagatcctg
aaaagagcagatgttattctggcaactaacactggagcctctaatgatggtcccctgaaa
catcttcctaatgatcattttgacttggtagtgatagatgagtgtgctcaggccctagag
agcagctgttggatcgctctgctcaaagcacacaagtgcatactagctggggattacaaa
cagctgccacccaccatcaaatcacagagtgctgcatctaaaggcctgtctgtgagctta
atggagaggctgatcaagaaatatggagactcggtggttcgaatgctgaccactcagtat
cgtatgaacagtgccatcatgcagtgggcttcagaggagatgtatcagggcaaactgatc
gcacaccactcagtggagaaacacttgcttagagatctgtctggagttgctgatgttgag
gaaaccagaattccccttctgctcattgacacagcgggttgtggccttagtgagatggaa
gacacagatgagcagtccaaaggcaatcaaggagaggtggacattgtggctcttcatatt
aaagctcttactgaggctggagttcaagtcaaagatattgcgattattgcaccttataat
ctacaggtggatcttttgagagaaaaactgtcctgtaaatatgctgagctggagatcaag
tctgttgatggcttccagggcagagagaaagaggcagtggtgttgtcattggtcagatcc
aaccgaaagggtgaggttggatttcttgccgaagaccgaaggatcaatgtggctgtaact
cgtgccagacggcagctcacagtagtgtgtgattctcaaaccgttcgaaaccatgacttc
ctcaaatccctcgtggtctacatgactgaacacggggaagttcgaaccggatttgaatac
ctggaagactgtgtgccacagaattacacgcgtgacggtaaagacaaacagcgtggcgct
aaagatgcttcatccacaaaacagaagtctaaaaatcaaggtaaaaaatcagagcaagaa
catgagaaaaatgcaaactacagagagagtcaggacattgttcagtctggtcaacaaaac
aaacaaagtaaaaccaacaatctaccccatgctaaacccagagatgctgagcagacccaa
aataaaagacaagagatcaaggagcagttactaaactttctaaaggaccaaaaccaaaat
gaactacagttttcttcctcgctcaattcccacgagcgcatgctggtccacgagctctct
gaagaactgggtttaaagcacgaaagccagggagagggaaaaaaccgtcgcatcaccgtc
tcccggccaccggcagctccagaaattccaaaaaaggagccaaaaccccgaccagcagac
gtgactgcaagggctgtggtggaaccacatgccgagaaatcgcagaatgaagcctcacag
tcaccggttgatctaaaaagcctgcatctggagcgcatgcgtcgagaaatggagaaacga
gaggagaaaaagcaacaaaaaagcatgaggttggatccagatcttagtactagtaaaaaa
cagactgttaagaaatctaaaggcaccgctaaaggaggcactaagatgaaagcaggagca
gtggacatagctgcagcagccgcagccgatgacgattttgacgcgctcatcgatgctgtg
gtgaaggccgacagtgtgtgtgccttcgtcaagtgtaaagccagcgtcctcacgctaggc
cagctctgcatccactgtaacagacaatactgtctgagtcaccatatacctgaggttcat
ggatgtggtgacaaagcaaaatcccaggctagaatgaggatcagtaaggagggggtgctg
tatgctggaagtggacaaaaggacaaatcaatggatccaaataaaaaagcatacctgcag
agaaaatttgactccaagcttaaagatatggcatctcaaagaaaacccaaagctaaggac
aaagaaaattga
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