KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129418817
Entry
129418817         CDS       T09481                                 
Symbol
blm
Name
(RefSeq) recQ-like DNA helicase BLM isoform X1
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03440  Homologous recombination
manu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:manu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    129418817 (blm)
   03460 Fanconi anemia pathway
    129418817 (blm)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:manu03032]
    129418817 (blm)
   03400 DNA repair and recombination proteins [BR:manu03400]
    129418817 (blm)
Enzymes [BR:manu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     129418817 (blm)
DNA replication proteins [BR:manu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    129418817 (blm)
DNA repair and recombination proteins [BR:manu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     129418817 (blm)
    Bloom's syndrome complex (BTR)
     129418817 (blm)
   FA (Fanconi anemia) pathway
     129418817 (blm)
SSDB
Motif
Pfam: BLM_N DEAD BDHCT Helicase_C RecQ_Zn_bind HRDC RQC Syntaxin Helicase_Sgs1
Other DBs
NCBI-GeneID: 129418817
NCBI-ProteinID: XP_055029688
LinkDB
Position
15:complement(19565886..19579095)
AA seq 1443 aa
MASLKNNLKEQLERHSNAAHNKLSLLKPKPGGFCFKKKSPSGITKQDIHQKVTGANVLTN
RSVNVPHNFEVTKTPVTFLKKPEKAAPKVNFFTAPSRRKTMTVNPLANPFAMSKPPLVQS
TLKVLPKSTILPMDSTKDQTVGELKTDTSLSTSINEWDDFDDFETPVKERVVSPSAGTST
KKLGVLAQNTSPNSSCTKKVDTSLNGSSEATTDPKDVLPAADKISTEAPEREPEDSPIKK
TKKRKTSAQQKSLMSDTEDEEIIDCIPPSAKEEEKTETTDQMAAAAEEGKWADRDDIIDI
DDCETDYLYDDYDNFIPPSPVPEDPSPSFSNKDKSLSHPVTSADIKDSPHGPAPRLSASL
DIPVKESKGTDDALFSIMESICRLVDTIPEHELIDLTCGSELLLQRAHRKKILANAASSR
TSQSDRPPTPYCSVNRQSLVLTPSSLTSSMTSLTSEKGQNVRTGFQFRKSIASVMSLDNN
SVFEDSDCIINGVETPGGTWKPDSSKTEAAGDTLSNRSTPTLRKFESKSEKCYSGLSFNE
SNVQIVDEENVDLFFSPKKPTDHYKSKTSTAIANGTNSRADTEPDDFPIDDFDIDDFDET
DIPDYFEESHSVLTSKGNSGAMMSSSVREGGALKPLERKIVPTPAPQPTRTKQPEPTYRN
PAHDRFRGFNFPHSPEMMKIFHKKFGLHQFRFNQLEAINATLLGEDTFVLMPTGGGKSLC
YQLPACISAGVTIVISPLKSLIVDQVQKLTTLDICATSLSGDKSDSEAARIYMQLSRKDP
TIKLLYATPEKISASGRMISALQNLYERGLLARFVIDEAHCVSQWGHDFRPDYKRLHELR
RKFPNVPIMALTATATPRVQKDILNQLTMTRPQVFTMSFNRNNLKYSVLPKKPKKVDEDC
IQWIKKNYPRGSGIVYCLSRNDCDTLADSLQRAGIAALAYHAGLSDSDREYVQNKWINQD
GCQVMCATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEMSHCVLFYSYTDV
IRIKRLIAMDKDGNHQSKATHISNLHSMVHFCENVAECRRIQLLAYFGEHTFNTNFCKEH
PEVICDNCARPDKYKSRNVTEDVKKIVRFVQENCEKVGNRYGKTAQQNRLTLNMLVDIFL
GSKAARIQSGMFRVGAAYTKHNAERLFKKLVLDSILVEDLYITKNGQAVAYISAGQKAMN
VLSGSMQVEFIETESASSIRKHKASVIESVSKREEMVKKCLEELNDLCKRLGKVFGIHYY
NIFSTATLKKIAETLSADPEVLLQIDGVTEDKLEKYGAEFIELLQKYSEWQLPAEEKSES
SGWIDTTRGHQNDDEDDDDDATGDSTSSYFRKSSGRGQKRKQGSYSRKPKRRKATNQNSS
SKGGYGNNWSSSRGGYRGGSRSAGRGSSRPPPSAQAGKRPGFMALPTPQSAARPFLKPTF
SHL
NT seq 4332 nt   +upstreamnt  +downstreamnt
atggcgagtttaaaaaataacctaaaggagcaactggagcgacacagcaatgctgcacac
aacaaactgtcattgcttaaaccaaagcctggggggttttgttttaaaaagaagtcacca
tctggtatcaccaaacaggacattcatcaaaaggtaactggtgcaaatgtcttaacaaac
aggagcgtcaatgttccacacaactttgaagtaacaaaaactcctgtgacatttctgaag
aagcccgagaaagcagcacccaaagtcaacttcttcacagctcccagcagacggaaaaca
atgactgttaacccattagccaacccgtttgctatgagcaaaccacctcttgtccagtct
acccttaaggttttgccgaaatctaccatcttgccaatggactccactaaagaccaaact
gtgggtgaactcaagactgacacctctctttccacttccattaatgaatgggacgacttt
gatgattttgaaaccccggttaaggaaagagtagtatcgcctagtgctgggacctctact
aaaaagctaggtgtattggcccagaacacgtccccaaattcctcttgtactaagaaagtt
gacactagtttaaatggcagttcagaggccacaactgacccaaaggacgtcctgccagca
gctgataaaattagcacagaagctcctgagagagagccagaagactcgcccattaaaaag
accaaaaaacgcaagacttcagcccagcaaaagtcattaatgagtgacacagaggatgaa
gagattattgactgtattccaccttctgcaaaagaggaagagaagactgaaacaacagat
cagatggctgctgctgctgaagaaggaaaatgggctgatagagatgacatcatagacatt
gatgactgtgagacagattacttatatgatgactatgataatttcatcccaccgtcacct
gttcctgaggatccgagtccatccttctcaaataaagacaaaagtttatcccatcctgtt
actagtgccgacataaaggattcaccacacggacctgctccacgcttgtcagcatccttg
gatatacctgtcaaagaatcaaaaggaacagatgatgctctcttcagtattatggaatct
atttgccgtctggtggacaccattccagaacatgaacttatagatttgacctgtggttca
gagttattactgcagagagcccacaggaaaaagattcttgctaatgctgcatcatcgaga
acatctcaatcagacagaccaccgactccatattgtagtgtaaacaggcaaagtttggtt
ctcacaccatctagtctgacatcatcgatgacttcactgacatcagaaaaaggacaaaat
gtcagaactggctttcagtttcgtaagtccatcgcctctgtcatgtctttggataataac
agtgtatttgaagactctgactgcattattaacggagttgaaacgcctggaggtacctgg
aagcctgacagctcaaaaacagaagctgctggggacaccttaagcaacaggtcaactccc
actttgaggaagtttgaatcaaagtcggaaaaatgctactcggggttgtcattcaatgaa
tcaaacgttcagattgtggatgaagaaaatgtcgacctgttcttttctcccaaaaaacca
acggaccattacaaatctaaaaccagcacggcaatagctaatggcacaaattctcgagca
gacaccgagccagacgacttcccaatcgatgattttgatattgatgactttgatgagacc
gatatcccagattattttgaggaatctcatagtgtcctgacatcaaagggcaactctggt
gctatgatgtcgtcatcagtgcgggaaggaggggctttaaaacctttggagagaaaaata
gttcccacaccagcaccacaacctaccagaactaaacaacctgaacccacatatagaaac
ccagctcatgatcgcttcagaggtttcaacttccctcatagcccagagatgatgaagatc
tttcataagaagtttggtcttcatcagttcagatttaatcagctggaggccattaatgcc
actttgttaggagaagacacatttgtactcatgcctacaggtggcggtaaaagtctctgc
tatcagcttcctgcttgtatatctgcaggagtgaccatagttatatcacctctaaagtct
ctcatagttgaccaggtccagaaactcaccacactagatatctgtgcaactagtttatca
ggggacaaaagtgatagtgaggctgcaagaatctatatgcagctgtctagaaaggatcct
accatcaaactgctttatgccactcctgagaagatatctgcaagtggaaggatgatcagt
gcccttcagaatctgtatgaaagaggtctgctggctcgctttgtcattgatgaggcccat
tgtgtcagtcagtggggtcatgacttcaggccagactacaagcgtttacatgagctcagg
cgaaagtttcccaatgttcctataatggccctgacagccactgccactcctagagttcag
aaggacatccttaaccagctgacaatgactcgtcctcaggtattcactatgagctttaac
aggaacaacctcaaatactctgttttgcccaaaaagcctaagaaggtagatgaggactgc
attcagtggatcaagaaaaactatccacgtggctcgggaattgtgtactgcttgtctcga
aatgattgcgacactctggctgacagtcttcagagggccgggattgcagcgcttgcttat
cacgctggactaagcgacagtgatagggaatatgtccagaacaaatggatcaaccaggat
ggttgtcaggttatgtgtgccaccattgcattcggcatgggaattgacaagccagatgtg
cgttatgtaattcatgccagtctgcctaaatcagtggagggttactaccaggagtcaggc
agagctggtcgagatggagagatgtcccactgcgtgctcttctactcatacactgatgtt
atccggatcaaaagactcattgctatggataaagatggcaaccatcaatctaaagcaacc
cacatcagcaacctgcacagtatggtgcatttctgtgagaatgtggccgagtgcagacga
atccagctgctggcgtactttggcgagcacacgtttaatacaaacttctgtaaagagcac
cctgaggttatctgcgacaattgtgccagaccagacaaatacaaatcaagaaatgtcaca
gaagatgtgaagaagattgtgaggtttgtgcaggagaactgtgagaaggttggaaaccga
tacggcaaaaccgcacagcagaaccgactcaccctgaacatgctggttgacatatttctg
ggctctaaagcggctcggatccaatccgggatgttccgggtgggagcagcgtataccaaa
cacaatgctgagagactctttaagaaactggtgcttgatagcattctggtggaagacttg
tacatcaccaagaacggccaagcagtggcctatatatcggcagggcaaaaagccatgaat
gtgctgagtggcagtatgcaggttgaattcattgagacggagagtgcttccagcatcaga
aagcacaaagcttctgtgattgagagcgtctctaagagagaagagatggtgaagaagtgt
ctggaggaactcaatgatctgtgcaagagactcggcaaagtcttcggcatccattactac
aacattttctccacagccacgctgaaaaagattgcagagacgctctcagctgatccagag
gttcttctgcagatcgatggcgtgactgaagataaactggagaaatatggagctgagttt
attgaactgctacagaaatactcggagtggcaactgcctgctgaggaaaagtctgagagc
tctggatggatcgacacaacccgaggccatcagaacgatgatgaagatgatgatgatgac
gcaacgggcgacagcacatcatcgtacttcagaaagtcctctggacgaggacagaaaaga
aagcaagggtcttactccagaaaacctaaaaggaggaaagctactaaccagaattcctcc
tctaaaggtggatacggcaataactggtcttcatcgcgaggcggatacagaggtgggagt
cgcagtgcaggcaggggctccagcaggccacctccgtcggctcaagcaggaaagaggcct
ggtttcatggctttgcccaccccacaaagtgctgcgcgcccattcctaaaaccaacattc
tctcatttatag

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